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The map label for this gene is yoaA [C]

Identifier: 158336070

GI number: 158336070

Start: 2965656

End: 2967200

Strand: Reverse

Name: yoaA [C]

Synonym: AM1_2931

Alternate gene names: 158336070

Gene position: 2967200-2965656 (Counterclockwise)

Preceding gene: 158336071

Following gene: 158336069

Centisome position: 45.62

GC content: 53.2

Gene sequence:

>1545_bases
TTGATTGTGATTGAGGTCGAAGTTCATCGCCAACTCCATGCCTTCCTGCGAGATCAGGGTTCTGATCAATGGCCTCATCA
CCTCACCATTGCTCGCCTCGTTGCTCGTGCCTTCCGGCTTAAGCGCAGTGCTCTGATTCAGATTAGTGCGTCAGCGAAAC
ATCAAGGGCTGCATCGACTCAGTTATTTAGCGCCGCTGATGATTTGGCGAGACGCCGTTATCCTAGTGGCGCCCCTGGCT
GCGCAACAGCAATTGCTCCGGGTTGAGATGCCCCACCTTCACGAATGGATGCAGATCAAAAAGCCAATTTTGGCTGCTGA
CCATTGGCCCGGAAGTCACTTTAAAGGCGTTTTACTGGTCACTCCAGAGGTATGGTTACGAGACTACCTGACCCAGGCCT
ATCAATTTCCCTCTGATATCCCTACCCTGATTGATAATGCTGACCAGCTTGAAGGTTGGGCTCAGCAACAGCTCACCCTG
TCGCTCCACCCACCGGACTGGGAGCAACTGATTTGGTGTTACCCGCCGCTGCTAGAGTTGATTCGGGAAACTCGGGTTAA
GCTAACTCGTGCGCTTTTCCAGCACCCTGAGAATCCCTATGGCCACACCCTTATTGAGCAGAAAGAACGTCAAATTTTAG
CCCAGCTACATCAAGCGATTCTGGCTCATGGTATGGCCCTTAGTCCGCCGAATTGGCAGCAGTTTTGGCAGGCCTATCAA
TCGGATCATCATCTATTGTGGAGTGGCCTAAACCGCGACAATGGTGCTTTTACGTTGCACTGTGCTCCCAATGAAGTCAA
TCTCAGCTTGCAGGGGTTATGGTCGCGACAGCCGGTTGTACTGATGGGCAGTAGCTTTGACCTTGAACCCGAGGCGAAGC
TATTTCGCCAGCAACTGGGCCTTGAAGACATGACCTATGTTCAATTTGGAGCCCATCGAGAGGCGGAAGCGGTGCAGCTA
TATCTCCCAGATGGCTTACCTATGCCCAATACCCCTTCATTTCAAGGAGCCTTACTGAAGCAGCTGCATCTTCTGATGGT
TGCCAATGCCCAGCCTGGGGGACCGACGGTCATTATTATCGAAGACACACCGATGCAGCGCCAAATGGCGACAGCGATGG
CCTCGGAATTTGGCTCCCGGGTCCAACTGGAAACGTCAGATCTGGATGCAGAAACGATTCTGATTACCGGCTGGGACTAT
TGGTTACAGCATCAGGCCACCCTGCCGACTCCCGCCCTGCTGGTTGTGGCTACCCTGCCCATCCCCTCCTTGGAAGATCC
GCGGGTGGCGGGTCGGGTGGCTTACTATAAGCACCATCGCCAAGACTGGTTCCGACTCTACCTATTACCTACGGCTTTGC
GAACGCTACAGGCTGCGATCGCACCCATCAGACGTCATCAAGGTATCGTGGCGCTCTTCGATAATCGGGTCTTACATCGT
AGCTATGGTCAACAAGTTTTAACAGCCCTGAGTCCCTATTCACGCATCAACTATTTGGATGACAGCTTGTTCGCAACGGC
GTCTGGTCAGCAGCGGCTTGAGTGA

Upstream 100 bases:

>100_bases
AGAAGTTGCAGCAGTTAGTGGCTTTTTTACAGCAGGCTTAGGCCCTCGGCACATTCTGAGGACTGTGCCAGAATGAAAGT
CATGCATTGTCTTTTTAGTT

Downstream 100 bases:

>100_bases
AGGAGACCGTATCTTAAATCAGGATGATCCCTCTGTAATCCATCCCCATTTTGTCGATAAGATTTAGGCAGTACTGTTTG
CGACTTTAGTGGTCTAAATT

Product: DNA helicase

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase DinG; Carboxyl-Terminal Protease; Rad3-Like DNA Helicase-Like Protein; DNA Helicase; Rad3-Related DNA Helicases

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MIVIEVEVHRQLHAFLRDQGSDQWPHHLTIARLVARAFRLKRSALIQISASAKHQGLHRLSYLAPLMIWRDAVILVAPLA
AQQQLLRVEMPHLHEWMQIKKPILAADHWPGSHFKGVLLVTPEVWLRDYLTQAYQFPSDIPTLIDNADQLEGWAQQQLTL
SLHPPDWEQLIWCYPPLLELIRETRVKLTRALFQHPENPYGHTLIEQKERQILAQLHQAILAHGMALSPPNWQQFWQAYQ
SDHHLLWSGLNRDNGAFTLHCAPNEVNLSLQGLWSRQPVVLMGSSFDLEPEAKLFRQQLGLEDMTYVQFGAHREAEAVQL
YLPDGLPMPNTPSFQGALLKQLHLLMVANAQPGGPTVIIIEDTPMQRQMATAMASEFGSRVQLETSDLDAETILITGWDY
WLQHQATLPTPALLVVATLPIPSLEDPRVAGRVAYYKHHRQDWFRLYLLPTALRTLQAAIAPIRRHQGIVALFDNRVLHR
SYGQQVLTALSPYSRINYLDDSLFATASGQQRLE

Sequences:

>Translated_514_residues
MIVIEVEVHRQLHAFLRDQGSDQWPHHLTIARLVARAFRLKRSALIQISASAKHQGLHRLSYLAPLMIWRDAVILVAPLA
AQQQLLRVEMPHLHEWMQIKKPILAADHWPGSHFKGVLLVTPEVWLRDYLTQAYQFPSDIPTLIDNADQLEGWAQQQLTL
SLHPPDWEQLIWCYPPLLELIRETRVKLTRALFQHPENPYGHTLIEQKERQILAQLHQAILAHGMALSPPNWQQFWQAYQ
SDHHLLWSGLNRDNGAFTLHCAPNEVNLSLQGLWSRQPVVLMGSSFDLEPEAKLFRQQLGLEDMTYVQFGAHREAEAVQL
YLPDGLPMPNTPSFQGALLKQLHLLMVANAQPGGPTVIIIEDTPMQRQMATAMASEFGSRVQLETSDLDAETILITGWDY
WLQHQATLPTPALLVVATLPIPSLEDPRVAGRVAYYKHHRQDWFRLYLLPTALRTLQAAIAPIRRHQGIVALFDNRVLHR
SYGQQVLTALSPYSRINYLDDSLFATASGQQRLE
>Mature_514_residues
MIVIEVEVHRQLHAFLRDQGSDQWPHHLTIARLVARAFRLKRSALIQISASAKHQGLHRLSYLAPLMIWRDAVILVAPLA
AQQQLLRVEMPHLHEWMQIKKPILAADHWPGSHFKGVLLVTPEVWLRDYLTQAYQFPSDIPTLIDNADQLEGWAQQQLTL
SLHPPDWEQLIWCYPPLLELIRETRVKLTRALFQHPENPYGHTLIEQKERQILAQLHQAILAHGMALSPPNWQQFWQAYQ
SDHHLLWSGLNRDNGAFTLHCAPNEVNLSLQGLWSRQPVVLMGSSFDLEPEAKLFRQQLGLEDMTYVQFGAHREAEAVQL
YLPDGLPMPNTPSFQGALLKQLHLLMVANAQPGGPTVIIIEDTPMQRQMATAMASEFGSRVQLETSDLDAETILITGWDY
WLQHQATLPTPALLVVATLPIPSLEDPRVAGRVAYYKHHRQDWFRLYLLPTALRTLQAAIAPIRRHQGIVALFDNRVLHR
SYGQQVLTALSPYSRINYLDDSLFATASGQQRLE

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58725; Mature: 58725

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVIEVEVHRQLHAFLRDQGSDQWPHHLTIARLVARAFRLKRSALIQISASAKHQGLHRL
CEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHH
SYLAPLMIWRDAVILVAPLAAQQQLLRVEMPHLHEWMQIKKPILAADHWPGSHFKGVLLV
HHHHHHHHHHCHHHHEECHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCCCCCCCCEEEEE
TPEVWLRDYLTQAYQFPSDIPTLIDNADQLEGWAQQQLTLSLHPPDWEQLIWCYPPLLEL
CHHHHHHHHHHHHHCCCCCCHHHHCCCHHHCCHHCCCEEEEECCCCHHHHEEHHHHHHHH
IRETRVKLTRALFQHPENPYGHTLIEQKERQILAQLHQAILAHGMALSPPNWQQFWQAYQ
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC
SDHHLLWSGLNRDNGAFTLHCAPNEVNLSLQGLWSRQPVVLMGSSFDLEPEAKLFRQQLG
CCCEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHCC
LEDMTYVQFGAHREAEAVQLYLPDGLPMPNTPSFQGALLKQLHLLMVANAQPGGPTVIII
CCCCHHEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCEEEEE
EDTPMQRQMATAMASEFGSRVQLETSDLDAETILITGWDYWLQHQATLPTPALLVVATLP
CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCHHHHCCCCCCCCCCEEEEEECC
IPSLEDPRVAGRVAYYKHHRQDWFRLYLLPTALRTLQAAIAPIRRHQGIVALFDNRVLHR
CCCCCCCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH
SYGQQVLTALSPYSRINYLDDSLFATASGQQRLE
HHHHHHHHHHCHHHHHHHCCCHHEEECCCHHCCC
>Mature Secondary Structure
MIVIEVEVHRQLHAFLRDQGSDQWPHHLTIARLVARAFRLKRSALIQISASAKHQGLHRL
CEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHH
SYLAPLMIWRDAVILVAPLAAQQQLLRVEMPHLHEWMQIKKPILAADHWPGSHFKGVLLV
HHHHHHHHHHCHHHHEECHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCCCCCCCCEEEEE
TPEVWLRDYLTQAYQFPSDIPTLIDNADQLEGWAQQQLTLSLHPPDWEQLIWCYPPLLEL
CHHHHHHHHHHHHHCCCCCCHHHHCCCHHHCCHHCCCEEEEECCCCHHHHEEHHHHHHHH
IRETRVKLTRALFQHPENPYGHTLIEQKERQILAQLHQAILAHGMALSPPNWQQFWQAYQ
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC
SDHHLLWSGLNRDNGAFTLHCAPNEVNLSLQGLWSRQPVVLMGSSFDLEPEAKLFRQQLG
CCCEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHCC
LEDMTYVQFGAHREAEAVQLYLPDGLPMPNTPSFQGALLKQLHLLMVANAQPGGPTVIII
CCCCHHEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCEEEEE
EDTPMQRQMATAMASEFGSRVQLETSDLDAETILITGWDYWLQHQATLPTPALLVVATLP
CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCHHHHCCCCCCCCCCEEEEEECC
IPSLEDPRVAGRVAYYKHHRQDWFRLYLLPTALRTLQAAIAPIRRHQGIVALFDNRVLHR
CCCCCCCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH
SYGQQVLTALSPYSRINYLDDSLFATASGQQRLE
HHHHHHHHHHCHHHHHHHCCCHHEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA