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The map label for this gene is ybgI [C]

Identifier: 158336041

GI number: 158336041

Start: 2936781

End: 2937590

Strand: Direct

Name: ybgI [C]

Synonym: AM1_2900

Alternate gene names: 158336041

Gene position: 2936781-2937590 (Clockwise)

Preceding gene: 158336037

Following gene: 158336042

Centisome position: 45.16

GC content: 48.4

Gene sequence:

>810_bases
ATGAAAATTAGCGAATTGATTGAGTGGTTTGAAGGCTGGGCTAACCCCTCCTGGCAGGAGAAGTGGGATAACTGTGGTTG
GCAGATTGAGCCAGGAATTTTGGATCAACCGGCTCGGGTACTGGTATGTTTAACACCGACTTTGGCGGTGATGGAAGAAG
CGATTGCACTGCAGCAGCAGGGCACCCCTGTTAATTTAATTTTTGCCCACCATCCTTTGATTTTTAGCCCTCTGAAATCG
GTGCAGAAAGGTGATGCCATTGGCGATATGGTCCGCCTCTCCATTAACCATCAAATTGGAGTTTACAGTGCCCATACCAA
TTTCGATCAAGTTATGGATGGCACAGCGGATGTATTGTCTCAGCTTTTAGAGCTACAGAGCGCGGAACCTGTAGAGCCGA
CTCAAGATGGCCTCGGATACGGTCGCGTGGGCAATCTGAAGTCTGCGCTGACCCTACAGCAGCTTTTAGCCAAGATTCAG
TCTGCTCTCAACCCAGCCAATTTATTGGTATCACCCACAGCCGATCGTCAGCAAGAAATTGAGCGGGTCGCGGTATTGGG
AGGGTCTGGCGCTAGCTATATCTCCGCCGTGAGCCAAACGGGTGCTCAAGTCTATTTGACATCAGACTGTAAATTTCATC
AGTTTCAAGAGAGTCGCGATTTCAACCTAATTCTGATTGATGCCGGACACTATGCAACAGAACGACCTGCCTGTGAACGC
TTAGCTCAAAAATTTACCGACAAGGGAGTTGCATGGGCACAACTGAGCCAGTTAGATGAAGATTTTCGTAATTTCTGGCA
AACAGTGTAG

Upstream 100 bases:

>100_bases
AGAGGGGAATGTAAGCTAGACTTTTTATTGCTCGATTAGATCCCAGAAAGCTGAAGCTCTGATCGCATGTCCGACAACGC
GTCAGGATGGTAATCCACCG

Downstream 100 bases:

>100_bases
AAAATTTGAAGTTTATCGAGGTATAGACTCTTGCCAACCTGACTTTTTGAATATTTCTGCAGTTCTGTGAATCGCACTAT
GGGGCTTAAGGTTAAGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKISELIEWFEGWANPSWQEKWDNCGWQIEPGILDQPARVLVCLTPTLAVMEEAIALQQQGTPVNLIFAHHPLIFSPLKS
VQKGDAIGDMVRLSINHQIGVYSAHTNFDQVMDGTADVLSQLLELQSAEPVEPTQDGLGYGRVGNLKSALTLQQLLAKIQ
SALNPANLLVSPTADRQQEIERVAVLGGSGASYISAVSQTGAQVYLTSDCKFHQFQESRDFNLILIDAGHYATERPACER
LAQKFTDKGVAWAQLSQLDEDFRNFWQTV

Sequences:

>Translated_269_residues
MKISELIEWFEGWANPSWQEKWDNCGWQIEPGILDQPARVLVCLTPTLAVMEEAIALQQQGTPVNLIFAHHPLIFSPLKS
VQKGDAIGDMVRLSINHQIGVYSAHTNFDQVMDGTADVLSQLLELQSAEPVEPTQDGLGYGRVGNLKSALTLQQLLAKIQ
SALNPANLLVSPTADRQQEIERVAVLGGSGASYISAVSQTGAQVYLTSDCKFHQFQESRDFNLILIDAGHYATERPACER
LAQKFTDKGVAWAQLSQLDEDFRNFWQTV
>Mature_269_residues
MKISELIEWFEGWANPSWQEKWDNCGWQIEPGILDQPARVLVCLTPTLAVMEEAIALQQQGTPVNLIFAHHPLIFSPLKS
VQKGDAIGDMVRLSINHQIGVYSAHTNFDQVMDGTADVLSQLLELQSAEPVEPTQDGLGYGRVGNLKSALTLQQLLAKIQ
SALNPANLLVSPTADRQQEIERVAVLGGSGASYISAVSQTGAQVYLTSDCKFHQFQESRDFNLILIDAGHYATERPACER
LAQKFTDKGVAWAQLSQLDEDFRNFWQTV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321217, Length=245, Percent_Identity=26.9387755102041, Blast_Score=70, Evalue=4e-13,
Organism=Drosophila melanogaster, GI19921430, Length=268, Percent_Identity=26.865671641791, Blast_Score=98, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 29793; Mature: 29793

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISELIEWFEGWANPSWQEKWDNCGWQIEPGILDQPARVLVCLTPTLAVMEEAIALQQQ
CCHHHHHHHHHHCCCCCHHHHHCCCCCEECCCCCCCCCEEEEEECHHHHHHHHHHHHHCC
GTPVNLIFAHHPLIFSPLKSVQKGDAIGDMVRLSINHQIGVYSAHTNFDQVMDGTADVLS
CCCEEEEEECCCHHHHHHHHHHCCCHHHHHHEEEECCEEEEEECCCCHHHHHCCHHHHHH
QLLELQSAEPVEPTQDGLGYGRVGNLKSALTLQQLLAKIQSALNPANLLVSPTADRQQEI
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHH
ERVAVLGGSGASYISAVSQTGAQVYLTSDCKFHQFQESRDFNLILIDAGHYATERPACER
HHHHHCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHH
LAQKFTDKGVAWAQLSQLDEDFRNFWQTV
HHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKISELIEWFEGWANPSWQEKWDNCGWQIEPGILDQPARVLVCLTPTLAVMEEAIALQQQ
CCHHHHHHHHHHCCCCCHHHHHCCCCCEECCCCCCCCCEEEEEECHHHHHHHHHHHHHCC
GTPVNLIFAHHPLIFSPLKSVQKGDAIGDMVRLSINHQIGVYSAHTNFDQVMDGTADVLS
CCCEEEEEECCCHHHHHHHHHHCCCHHHHHHEEEECCEEEEEECCCCHHHHHCCHHHHHH
QLLELQSAEPVEPTQDGLGYGRVGNLKSALTLQQLLAKIQSALNPANLLVSPTADRQQEI
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHH
ERVAVLGGSGASYISAVSQTGAQVYLTSDCKFHQFQESRDFNLILIDAGHYATERPACER
HHHHHCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHH
LAQKFTDKGVAWAQLSQLDEDFRNFWQTV
HHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]