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The map label for this gene is yjcF [C]

Identifier: 158335910

GI number: 158335910

Start: 2804349

End: 2805380

Strand: Direct

Name: yjcF [C]

Synonym: AM1_2768

Alternate gene names: 158335910

Gene position: 2804349-2805380 (Clockwise)

Preceding gene: 158335909

Following gene: 158335911

Centisome position: 43.12

GC content: 48.74

Gene sequence:

>1032_bases
TTGCCAATTAGTGCCCCAGGTCTCCTAAGGAATATGAAAGCGAAAGCACTACTTCAACAATATGCCAACAATGTCTTTGA
CTTTAGTGGTCAAACTCTAGCAGGGTTAGATCTCGCTGGGGCCGACTTAATTGGCATTAATCTATCGGCAGCAGACCTAC
GCAATACAAATTTGAGTTTGGCCTACTTGAATCGCGTGGATCTGCAAACAAGCAATCTAACTCAGAGCAATTTGAGCGGG
GCTACCTTAACTCAAGCCAACTTAAGCCAAGCGAACCTCACGGATGCAGCATTGCATGGGGCGAATCTACAACGGGCGGT
TCTTTTCAAAGCAGATCTGACCTTAGCAGATCTAACGGATGCCAATCTGATGGAAGCCGATCTGCGAGAAGTAACCCTCC
GCAGTACCAACCTGACAGGGGCTTGTTTGCGCAGTGCCAACCTGCGAGAAGAAAATCGCAACTGTGCGGATCTTAGAGGA
GCCGTACTCGATGGGGTCGATCTGCAAGGAGCTAATTTGCGTGGCGCCGATCTAAGCAAAGTCAGCTTGCAAGGGGCGAA
TCTCCGCAATGCAAATTTACGAGCAGCGAATTTAGCCGGGGCCGATCTTCAAGGCGCAAATCTGGAGCAAGCCTTACTTA
TTGAGGCCAATCTCCAACAAGCGAATCTCAGTCACGCCACCTTAGCCGATGCCAAGCTGGAACGAGTCAATCTGCAAATG
GCTCAGCTTGTCAATAGTGATTTAAGCGATTGCACTTTGGTAGAAAGTGAACTGAGTCAAGCCAATTTGCAGGGCGCAAC
CCTCTATCGCAGTCGGCTGAATCGGGCCAATCTCAGTCGGGCAAACTTGACAGAGGTCAACCTACAAGAAGCATTTCTGA
TTCAAGCATTTTTAGCCAGAACCGATCTCACAGATGCCAATCTCCAAGGGGCGAATCTAACCCGTTCAGATTGGAGTAGT
GCAATTTTAACCAGAACAGTTTTAACGGGAGCGACACTACCCGACGGAACAGTATGCATGAGTCAAACTTGA

Upstream 100 bases:

>100_bases
GGGCAGTCCTCCCCCAATACCGGGGTCAATCCCTAGCCACGTTGGAGAAACCAGAGCCAAACGTCATCGACGACTTAGAG
ATAGAAGATGATATGCTCAC

Downstream 100 bases:

>100_bases
CCCTCGTCTCATCTATTCCACTTCCAAGCTGACGTTGTTAACATCGGCACGGGAAAACCGTCTTTGGGATGATAGTCTGC
ACACAAAGTATTCCATTCAT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MPISAPGLLRNMKAKALLQQYANNVFDFSGQTLAGLDLAGADLIGINLSAADLRNTNLSLAYLNRVDLQTSNLTQSNLSG
ATLTQANLSQANLTDAALHGANLQRAVLFKADLTLADLTDANLMEADLREVTLRSTNLTGACLRSANLREENRNCADLRG
AVLDGVDLQGANLRGADLSKVSLQGANLRNANLRAANLAGADLQGANLEQALLIEANLQQANLSHATLADAKLERVNLQM
AQLVNSDLSDCTLVESELSQANLQGATLYRSRLNRANLSRANLTEVNLQEAFLIQAFLARTDLTDANLQGANLTRSDWSS
AILTRTVLTGATLPDGTVCMSQT

Sequences:

>Translated_343_residues
MPISAPGLLRNMKAKALLQQYANNVFDFSGQTLAGLDLAGADLIGINLSAADLRNTNLSLAYLNRVDLQTSNLTQSNLSG
ATLTQANLSQANLTDAALHGANLQRAVLFKADLTLADLTDANLMEADLREVTLRSTNLTGACLRSANLREENRNCADLRG
AVLDGVDLQGANLRGADLSKVSLQGANLRNANLRAANLAGADLQGANLEQALLIEANLQQANLSHATLADAKLERVNLQM
AQLVNSDLSDCTLVESELSQANLQGATLYRSRLNRANLSRANLTEVNLQEAFLIQAFLARTDLTDANLQGANLTRSDWSS
AILTRTVLTGATLPDGTVCMSQT
>Mature_342_residues
PISAPGLLRNMKAKALLQQYANNVFDFSGQTLAGLDLAGADLIGINLSAADLRNTNLSLAYLNRVDLQTSNLTQSNLSGA
TLTQANLSQANLTDAALHGANLQRAVLFKADLTLADLTDANLMEADLREVTLRSTNLTGACLRSANLREENRNCADLRGA
VLDGVDLQGANLRGADLSKVSLQGANLRNANLRAANLAGADLQGANLEQALLIEANLQQANLSHATLADAKLERVNLQMA
QLVNSDLSDCTLVESELSQANLQGATLYRSRLNRANLSRANLTEVNLQEAFLIQAFLARTDLTDANLQGANLTRSDWSSA
ILTRTVLTGATLPDGTVCMSQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=200, Percent_Identity=34, Blast_Score=87, Evalue=3e-17,
Organism=Escherichia coli, GI1790502, Length=272, Percent_Identity=23.1617647058824, Blast_Score=62, Evalue=6e-11,
Organism=Drosophila melanogaster, GI221377802, Length=200, Percent_Identity=36, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 36496; Mature: 36364

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISAPGLLRNMKAKALLQQYANNVFDFSGQTLAGLDLAGADLIGINLSAADLRNTNLSL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEECCCEEEEEECCHHHCCCCCEEE
AYLNRVDLQTSNLTQSNLSGATLTQANLSQANLTDAALHGANLQRAVLFKADLTLADLTD
EEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEEEEECCEEEECCC
ANLMEADLREVTLRSTNLTGACLRSANLREENRNCADLRGAVLDGVDLQGANLRGADLSK
CHHHHHHHHHHEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCE
VSLQGANLRNANLRAANLAGADLQGANLEQALLIEANLQQANLSHATLADAKLERVNLQM
EEECCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
AQLVNSDLSDCTLVESELSQANLQGATLYRSRLNRANLSRANLTEVNLQEAFLIQAFLAR
HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHH
TDLTDANLQGANLTRSDWSSAILTRTVLTGATLPDGTVCMSQT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCC
>Mature Secondary Structure 
PISAPGLLRNMKAKALLQQYANNVFDFSGQTLAGLDLAGADLIGINLSAADLRNTNLSL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEECCCEEEEEECCHHHCCCCCEEE
AYLNRVDLQTSNLTQSNLSGATLTQANLSQANLTDAALHGANLQRAVLFKADLTLADLTD
EEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEEEEECCEEEECCC
ANLMEADLREVTLRSTNLTGACLRSANLREENRNCADLRGAVLDGVDLQGANLRGADLSK
CHHHHHHHHHHEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCE
VSLQGANLRNANLRAANLAGADLQGANLEQALLIEANLQQANLSHATLADAKLERVNLQM
EEECCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
AQLVNSDLSDCTLVESELSQANLQGATLYRSRLNRANLSRANLTEVNLQEAFLIQAFLAR
HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHH
TDLTDANLQGANLTRSDWSSAILTRTVLTGATLPDGTVCMSQT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]