| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158335905
Identifier: 158335905
GI number: 158335905
Start: 2799859
End: 2800230
Strand: Direct
Name: 158335905
Synonym: AM1_2763
Alternate gene names: NA
Gene position: 2799859-2800230 (Clockwise)
Preceding gene: 158335904
Following gene: 158335906
Centisome position: 43.05
GC content: 48.66
Gene sequence:
>372_bases ATGGCCGCCCCAAATCCTCATTACTCAGCAGCTATTTCTCGCCTAGAACAAGAAGATGTCCCAGGAGCAATGAGCGCACT GAATCAAGCGCTCCAGCTAAACCCCTCTTTGGCAGAAGCCTACACGCTCAGAGGAATTCTTTTGATGAGCAAGAAGCAAT TTCAGCCAGCATCTGATGATTTTGCTCAAGTGACTCGGCTGCAGCCCAACAGCGTAGAAGCTCATATCCATCTTGCCCAA AGTCAAATGGCTTTCAAAGATTTTCAAGGAGCATTACAATCCGCAACCACCGCTAATCACCTGGATCCGCAGAACCAAGC AGCAGCTCTCTTGGTACAAATGATTCCCCATCTAGCTCAACCATCCCCATAG
Upstream 100 bases:
>100_bases TCAATGCGCCGTAACCCCGCCCATTTCTATCTCACTGGGGCACTAGCTGCTGTCCTCCTCAGCATGAGATCAGGGAATCG TAAACCTTCCACCCTTGGCA
Downstream 100 bases:
>100_bases TTCAACCTTTTCCAGTCAAGACCAAGCTTGGCACTATCATTCTTACCAGGCTGAAATATTCTGGAGCCTTGGGCATTTCG GGGAGGCCCACTCTAGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MAAPNPHYSAAISRLEQEDVPGAMSALNQALQLNPSLAEAYTLRGILLMSKKQFQPASDDFAQVTRLQPNSVEAHIHLAQ SQMAFKDFQGALQSATTANHLDPQNQAAALLVQMIPHLAQPSP
Sequences:
>Translated_123_residues MAAPNPHYSAAISRLEQEDVPGAMSALNQALQLNPSLAEAYTLRGILLMSKKQFQPASDDFAQVTRLQPNSVEAHIHLAQ SQMAFKDFQGALQSATTANHLDPQNQAAALLVQMIPHLAQPSP >Mature_122_residues AAPNPHYSAAISRLEQEDVPGAMSALNQALQLNPSLAEAYTLRGILLMSKKQFQPASDDFAQVTRLQPNSVEAHIHLAQS QMAFKDFQGALQSATTANHLDPQNQAAALLVQMIPHLAQPSP
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13283; Mature: 13152
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPNPHYSAAISRLEQEDVPGAMSALNQALQLNPSLAEAYTLRGILLMSKKQFQPASDD CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCH FAQVTRLQPNSVEAHIHLAQSQMAFKDFQGALQSATTANHLDPQNQAAALLVQMIPHLAQ HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC PSP CCC >Mature Secondary Structure AAPNPHYSAAISRLEQEDVPGAMSALNQALQLNPSLAEAYTLRGILLMSKKQFQPASDD CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCH FAQVTRLQPNSVEAHIHLAQSQMAFKDFQGALQSATTANHLDPQNQAAALLVQMIPHLAQ HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC PSP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA