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The map label for this gene is petJ

Identifier: 158335898

GI number: 158335898

Start: 2791758

End: 2792123

Strand: Direct

Name: petJ

Synonym: AM1_2756

Alternate gene names: NA

Gene position: 2791758-2792123 (Clockwise)

Preceding gene: 158335897

Following gene: 158335899

Centisome position: 42.93

GC content: 50.55

Gene sequence:

>366_bases
TTGTTAAAGTTATTCCGTGTCTCGATGGCGTTGAGTCGAAAAGCTGGCTTATGGGTCGGCCTCATACTGATGTGGTTGGG
GGTGAATCTTGCCCCGGCCTGGGCTGCCTCTCCTGGGGACGGAGCTGTGCTGTTTGAAACCTACTGTGCAGGCTGTCATC
CCAAAGGCGGCAATATTATCCGTCGTCGCAAAACTTTAAAACTGAAATCTTTACAGCGAGACGGCTACGACACCCTAGCC
CCCGTCATCAACCTGATTACCCAGGGACAAAACAATATGCCGGGGTTTGCAGACCAGCTCAATGATACGCAAATCGAAAC
GGTAGCCCAGTTCGTTCTAGAACAAGCGAGCAACAATTGGAAATAA

Upstream 100 bases:

>100_bases
CTCATCCCAGGAATTAAGACGGCGTAAAGATTGGCAAAGCCAGTTGCTTCCCCTTCCATCGCGACCAACAATGGAGTTGA
ACCTTGCAGAGAGCTGTGTC

Downstream 100 bases:

>100_bases
CCCCCTAGAATCAGGAGCAGACGCTTGGACACCATCAAAATAGCCACTCCAGCAGATGCCGAAAATTGTCTGGCGACCCT
TACCTTGGCATTCTGCAATG

Product: cytochrome c6 PetJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MLKLFRVSMALSRKAGLWVGLILMWLGVNLAPAWAASPGDGAVLFETYCAGCHPKGGNIIRRRKTLKLKSLQRDGYDTLA
PVINLITQGQNNMPGFADQLNDTQIETVAQFVLEQASNNWK

Sequences:

>Translated_121_residues
MLKLFRVSMALSRKAGLWVGLILMWLGVNLAPAWAASPGDGAVLFETYCAGCHPKGGNIIRRRKTLKLKSLQRDGYDTLA
PVINLITQGQNNMPGFADQLNDTQIETVAQFVLEQASNNWK
>Mature_121_residues
MLKLFRVSMALSRKAGLWVGLILMWLGVNLAPAWAASPGDGAVLFETYCAGCHPKGGNIIRRRKTLKLKSLQRDGYDTLA
PVINLITQGQNNMPGFADQLNDTQIETVAQFVLEQASNNWK

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:
GO:0005506: Cytochrome c6
GO:0006810: Cytochrome c6
GO:0009055: Cytochrome c6
GO:0009579: Cytochrome c6
GO:0015979: Cytochrome c6
GO:0020037: Cytochrome c6
GO:0022900: Cytochrome c6
GO:0031977: Cytochrome c6
GO:0046872: Cytochrome c6
GO:0055114: Cytochrome c6

Cell location: Cellular thylakoid lumen (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family. PetJ subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13345; Mature: 13345

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLFRVSMALSRKAGLWVGLILMWLGVNLAPAWAASPGDGAVLFETYCAGCHPKGGNII
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCCCHH
RRRKTLKLKSLQRDGYDTLAPVINLITQGQNNMPGFADQLNDTQIETVAQFVLEQASNNW
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCC
K
C
>Mature Secondary Structure
MLKLFRVSMALSRKAGLWVGLILMWLGVNLAPAWAASPGDGAVLFETYCAGCHPKGGNII
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCCCHH
RRRKTLKLKSLQRDGYDTLAPVINLITQGQNNMPGFADQLNDTQIETVAQFVLEQASNNW
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]