| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is ybjQ [C]
Identifier: 158335877
GI number: 158335877
Start: 2768313
End: 2768657
Strand: Direct
Name: ybjQ [C]
Synonym: AM1_2735
Alternate gene names: 158335877
Gene position: 2768313-2768657 (Clockwise)
Preceding gene: 158335876
Following gene: 158335878
Centisome position: 42.57
GC content: 49.28
Gene sequence:
>345_bases ATGGGAAAGACAGACATGTTAGTGACCACAACAGATGTCATTCAAGGCGCTGTAATCGATAGTTATTGCGGCATTGTCAC CGCTGAAGTCGTGTATGGCAGTAATGCCTTGCGAGATTTCTTTGCTGGTATTCGCGATATTATTGGCGGTCGTACAGCCA GCTATGAACGCGTGTTTGAAAAGGGCCAGCAGGATGCCATTTCGGAACTGGAAAAACGGGCAGACCGGTTAGGGGCCAAT GCGGTGATCGGTGTGCGGGTCAGTACCGACACCATTAATATTGATGAAACCGGGGTTTTACTGTTAATTACCGCTACTGG GACAGCCGTGAAAATGGCCCGGTAA
Upstream 100 bases:
>100_bases TCTTTCTTGTTCTACTATTTTCAGTTTATTGCTCTACTATTTTCAGTAGCTCTGGGCTATCCAGGGATAAAATTATCCTT CACACACCACACCTAAACCT
Downstream 100 bases:
>100_bases AATTCGTTCCCTTTAGCTGAATCTGCTACAGTACGGTTTGGAGCTGTCGCGACGGAATTAAAAGAAAAACGCATGAGATT TGGTGTTTTTGCGATTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MGKTDMLVTTTDVIQGAVIDSYCGIVTAEVVYGSNALRDFFAGIRDIIGGRTASYERVFEKGQQDAISELEKRADRLGAN AVIGVRVSTDTINIDETGVLLLITATGTAVKMAR
Sequences:
>Translated_114_residues MGKTDMLVTTTDVIQGAVIDSYCGIVTAEVVYGSNALRDFFAGIRDIIGGRTASYERVFEKGQQDAISELEKRADRLGAN AVIGVRVSTDTINIDETGVLLLITATGTAVKMAR >Mature_113_residues GKTDMLVTTTDVIQGAVIDSYCGIVTAEVVYGSNALRDFFAGIRDIIGGRTASYERVFEKGQQDAISELEKRADRLGANA VIGVRVSTDTINIDETGVLLLITATGTAVKMAR
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family [H]
Homologues:
Organism=Escherichia coli, GI1787091, Length=109, Percent_Identity=44.0366972477064, Blast_Score=101, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002765 [H]
Pfam domain/function: PF01906 DUF74 [H]
EC number: NA
Molecular weight: Translated: 12158; Mature: 12027
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKTDMLVTTTDVIQGAVIDSYCGIVTAEVVYGSNALRDFFAGIRDIIGGRTASYERVFE CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHH KGQQDAISELEKRADRLGANAVIGVRVSTDTINIDETGVLLLITATGTAVKMAR CCCHHHHHHHHHHHHHCCCCEEEEEEEECCEECCCCCCEEEEEEECCCEEEECC >Mature Secondary Structure GKTDMLVTTTDVIQGAVIDSYCGIVTAEVVYGSNALRDFFAGIRDIIGGRTASYERVFE CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHH KGQQDAISELEKRADRLGANAVIGVRVSTDTINIDETGVLLLITATGTAVKMAR CCCHHHHHHHHHHHHHCCCCEEEEEEEECCEECCCCCCEEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]