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The map label for this gene is yxkH [H]

Identifier: 158335857

GI number: 158335857

Start: 2747589

End: 2748800

Strand: Reverse

Name: yxkH [H]

Synonym: AM1_2715

Alternate gene names: 158335857

Gene position: 2748800-2747589 (Counterclockwise)

Preceding gene: 158335860

Following gene: 158335855

Centisome position: 42.27

GC content: 36.96

Gene sequence:

>1212_bases
ATGAATCTTAGTGCAACATCTCTGAAACTAAAAAATATATATAGAAAAAATATTCCAGAAGTCAAAGCTTACTTCAAAGG
ATCATACCCTCGCTTTGTATTTGATAGTGAGGCTGAGATTATAAATGAGATACCTGTTTTTACCTTTCATTCGGTCAAGC
CTGATGTCTTTGAACAAAGACTTGAATATTTATATGAAAACAACTATCAAACACTCAAAGCTGCAGACTTTTTAAGTATT
ATCTTGGCTCAAAAACCGATGCCAGAGCGCTCAGTTCTTTTGACATTTGATGATGGTTGGGGAAGTTTATGGACCTTTGC
CTATCCCCTGCTCAAAAAATATGGCATGCATGCGACCTGTTTTCTAATTCCTGGAGTGATAAACTCAGGTGCGCAAAGAC
ACCATAATTTGGAAGATGTATGGTCTGGAAAAATTGGCTATAACTCGTTAATAGAACGCGAGTTATCGGCTGAGCCATAC
TGTACATGGGAAGAAATTTCTGAGATGTATCAATCTAGCGTATTTGATTTTCAATCGCATACTCTATATCACTCTCAGGT
TTATACGTCACCCAAGATAGTTGATTTTCTTAGTCCTGATTTTGACTACGCTATGGGTCATCATAATGTGCCAATTGTGA
GAAGTAATGGACAGGATATATGGGATAGACAACTCCAACTGGGAACGCCAATATATGAATATACCCCTAGAATGAGTGGC
AAGAAGAGATATCTTGATGATGAAAGACTTCGGCTATGCTGTACGAATTTTGTCAGTAATCATGGAGGAGTGGAATTTTT
TGGCCAGAAAAACTGGCGAAAGTCTTTATTGAAAGTCGTCAAGGATTTTGAAAATAAATATGGTGCTAAGGGGTATTATG
AAACTCAAGATGAGTTAGAACAAGGAATATATACTGATCTAATATCCTCCAAACAATTGATACAAGAAAAGCTTCAGAAT
AACGATGTCAACCAGTTATGTTTTCCATATTATGTTGGGAGTCCATTGGCTGTAAAACTTGCCAAAGATGCTGGCTATGC
ATGTAGCTACTGGGGATTTATTGATGGGAAGCCTTGTAATCGGGTGGGTGATGATCCTCATCAAGTTAGTAGGCTGAATG
ATGATTTTATTTTTTTGTTACCTGGTAATAGACGAAAAAAATTCCATCAACTGTTCGCTGATAAATTCCGGACTAGATTT
TTAATGAATTAG

Upstream 100 bases:

>100_bases
CTACTATATCAAGTGATTCAAGTTTGATAGTTGATAGCTACTCAATACCTTGTTGAGTCTTGAATGTAAGTATTCACTTA
TATCTTAAATTAATGAACTA

Downstream 100 bases:

>100_bases
TTTATTGCAGTGAGAAACATACTGGCAGTGAGAAACATAAGTGATTTCTAGAGTAATTGTCTATTATCTAGATGATGATG
CTAATAGAAAACTAGCTTCT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MNLSATSLKLKNIYRKNIPEVKAYFKGSYPRFVFDSEAEIINEIPVFTFHSVKPDVFEQRLEYLYENNYQTLKAADFLSI
ILAQKPMPERSVLLTFDDGWGSLWTFAYPLLKKYGMHATCFLIPGVINSGAQRHHNLEDVWSGKIGYNSLIERELSAEPY
CTWEEISEMYQSSVFDFQSHTLYHSQVYTSPKIVDFLSPDFDYAMGHHNVPIVRSNGQDIWDRQLQLGTPIYEYTPRMSG
KKRYLDDERLRLCCTNFVSNHGGVEFFGQKNWRKSLLKVVKDFENKYGAKGYYETQDELEQGIYTDLISSKQLIQEKLQN
NDVNQLCFPYYVGSPLAVKLAKDAGYACSYWGFIDGKPCNRVGDDPHQVSRLNDDFIFLLPGNRRKKFHQLFADKFRTRF
LMN

Sequences:

>Translated_403_residues
MNLSATSLKLKNIYRKNIPEVKAYFKGSYPRFVFDSEAEIINEIPVFTFHSVKPDVFEQRLEYLYENNYQTLKAADFLSI
ILAQKPMPERSVLLTFDDGWGSLWTFAYPLLKKYGMHATCFLIPGVINSGAQRHHNLEDVWSGKIGYNSLIERELSAEPY
CTWEEISEMYQSSVFDFQSHTLYHSQVYTSPKIVDFLSPDFDYAMGHHNVPIVRSNGQDIWDRQLQLGTPIYEYTPRMSG
KKRYLDDERLRLCCTNFVSNHGGVEFFGQKNWRKSLLKVVKDFENKYGAKGYYETQDELEQGIYTDLISSKQLIQEKLQN
NDVNQLCFPYYVGSPLAVKLAKDAGYACSYWGFIDGKPCNRVGDDPHQVSRLNDDFIFLLPGNRRKKFHQLFADKFRTRF
LMN
>Mature_403_residues
MNLSATSLKLKNIYRKNIPEVKAYFKGSYPRFVFDSEAEIINEIPVFTFHSVKPDVFEQRLEYLYENNYQTLKAADFLSI
ILAQKPMPERSVLLTFDDGWGSLWTFAYPLLKKYGMHATCFLIPGVINSGAQRHHNLEDVWSGKIGYNSLIERELSAEPY
CTWEEISEMYQSSVFDFQSHTLYHSQVYTSPKIVDFLSPDFDYAMGHHNVPIVRSNGQDIWDRQLQLGTPIYEYTPRMSG
KKRYLDDERLRLCCTNFVSNHGGVEFFGQKNWRKSLLKVVKDFENKYGAKGYYETQDELEQGIYTDLISSKQLIQEKLQN
NDVNQLCFPYYVGSPLAVKLAKDAGYACSYWGFIDGKPCNRVGDDPHQVSRLNDDFIFLLPGNRRKKFHQLFADKFRTRF
LMN

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1787260, Length=150, Percent_Identity=27.3333333333333, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1786322, Length=167, Percent_Identity=27.5449101796407, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 46960; Mature: 46960

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSATSLKLKNIYRKNIPEVKAYFKGSYPRFVFDSEAEIINEIPVFTFHSVKPDVFEQR
CCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCEEECCHHHHHHHCCCEEEECCCHHHHHHH
LEYLYENNYQTLKAADFLSIILAQKPMPERSVLLTFDDGWGSLWTFAYPLLKKYGMHATC
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEE
FLIPGVINSGAQRHHNLEDVWSGKIGYNSLIERELSAEPYCTWEEISEMYQSSVFDFQSH
EEECHHHCCCHHHCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
TLYHSQVYTSPKIVDFLSPDFDYAMGHHNVPIVRSNGQDIWDRQLQLGTPIYEYTPRMSG
EEEHHHHCCCCCHHHHCCCCCHHHCCCCCCCEEECCCCHHHHHHHHCCCCHHHHCCCCCC
KKRYLDDERLRLCCTNFVSNHGGVEFFGQKNWRKSLLKVVKDFENKYGAKGYYETQDELE
CCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
QGIYTDLISSKQLIQEKLQNNDVNQLCFPYYVGSPLAVKLAKDAGYACSYWGFIDGKPCN
HHHHHHHHHHHHHHHHHHHCCCCCCEEEHEECCCCEEEEEECCCCCEEEECCCCCCCCCC
RVGDDPHQVSRLNDDFIFLLPGNRRKKFHQLFADKFRTRFLMN
CCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLSATSLKLKNIYRKNIPEVKAYFKGSYPRFVFDSEAEIINEIPVFTFHSVKPDVFEQR
CCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCEEECCHHHHHHHCCCEEEECCCHHHHHHH
LEYLYENNYQTLKAADFLSIILAQKPMPERSVLLTFDDGWGSLWTFAYPLLKKYGMHATC
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEE
FLIPGVINSGAQRHHNLEDVWSGKIGYNSLIERELSAEPYCTWEEISEMYQSSVFDFQSH
EEECHHHCCCHHHCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
TLYHSQVYTSPKIVDFLSPDFDYAMGHHNVPIVRSNGQDIWDRQLQLGTPIYEYTPRMSG
EEEHHHHCCCCCHHHHCCCCCHHHCCCCCCCEEECCCCHHHHHHHHCCCCHHHHCCCCCC
KKRYLDDERLRLCCTNFVSNHGGVEFFGQKNWRKSLLKVVKDFENKYGAKGYYETQDELE
CCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
QGIYTDLISSKQLIQEKLQNNDVNQLCFPYYVGSPLAVKLAKDAGYACSYWGFIDGKPCN
HHHHHHHHHHHHHHHHHHHCCCCCCEEEHEECCCCEEEEEECCCCCEEEECCCCCCCCCC
RVGDDPHQVSRLNDDFIFLLPGNRRKKFHQLFADKFRTRFLMN
CCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]