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The map label for this gene is epsD [H]

Identifier: 158335856

GI number: 158335856

Start: 2746631

End: 2747497

Strand: Direct

Name: epsD [H]

Synonym: AM1_2714

Alternate gene names: 158335856

Gene position: 2746631-2747497 (Clockwise)

Preceding gene: 158335853

Following gene: 158335858

Centisome position: 42.23

GC content: 41.98

Gene sequence:

>867_bases
ATGCTCACTCATATTCCAGCCGTGGTTCATGAACATATGGTTGATGAAAGCATGCCGCCATACTTTAAACTTTTAGACTA
TTTACTATCTCGATGGACAGAGCGAGGAATAGCCATTTCTGATGCGGTTGCTAAATTTATGGAAACCTCCAGACATATTC
CATCTCATTTAGTTGATGTTATTCCCAACGGCATCCCTTTAGAGAAATTTGAAAATATAGACTCACACCAAGCCAGTTCA
TGGAAAGATGAATTCTCAATTTCTAACGAACATCAGCTTGTCGGCATTGTCGGTAGATTAAATCCCATTAAAGGCCATCG
CTTTTTTCTAGAGGCTGCCTCTATTGTGCTGCAATCTTATCCAAACATTCGCTTCCTAGTTGTAGGCGATGGAGATTTAC
GGACTGAGCTACAAGAACAAGCTGAACGCTTGGGTATTACAGACTCAGTAATTTTCACAGGTTTTCGGTCTGATGCATTT
TCCATTATCTCGGCTATGGATATTTTGGTAATCTCTTCATTATCCGAAGGTGGACCGCTGACACTCTTTGAGGCAATGGC
AGCTGGAACAGCCGTGATCGCCACTAATGTTATTGGGCTAAGTCATTTCGTCAAACCTGGAGAATCAGGTTATCTAGTCC
CTTCTCAGGATTCTGAAGCCTTGGCAAACAGGATCTTAGAACTTGTCCAAGATCAGGAGCTTTGTGAAAAGATGGGGCAT
GTCGCAAAATCCATGATTCAGAAGCAGGATAATAAAAGTACTGTAAAAGCAATCGAGCAATGCTATGAGGCAGTGCTTCA
AAGCTCGACAAAGTCACGGAATTTGCCAGACCAAACATTAGCTCATCAAATTTCCATGAGAAGCTAG

Upstream 100 bases:

>100_bases
TGCGATTTTTTTCGATCTTCTACAGACGATAAAAGCTCATAATATTAACATTCTCCATTTACATGGATATGGCGCTTGTA
CTTATGGCAGGCTAGCGAGC

Downstream 100 bases:

>100_bases
TTTTCTATTAGCATCATCATCTAGATAATAGACAATTACTCTAGAAATCACTTATGTTTCTCACTGCCAGTATGTTTCTC
ACTGCAATAAACTAATTCAT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MLTHIPAVVHEHMVDESMPPYFKLLDYLLSRWTERGIAISDAVAKFMETSRHIPSHLVDVIPNGIPLEKFENIDSHQASS
WKDEFSISNEHQLVGIVGRLNPIKGHRFFLEAASIVLQSYPNIRFLVVGDGDLRTELQEQAERLGITDSVIFTGFRSDAF
SIISAMDILVISSLSEGGPLTLFEAMAAGTAVIATNVIGLSHFVKPGESGYLVPSQDSEALANRILELVQDQELCEKMGH
VAKSMIQKQDNKSTVKAIEQCYEAVLQSSTKSRNLPDQTLAHQISMRS

Sequences:

>Translated_288_residues
MLTHIPAVVHEHMVDESMPPYFKLLDYLLSRWTERGIAISDAVAKFMETSRHIPSHLVDVIPNGIPLEKFENIDSHQASS
WKDEFSISNEHQLVGIVGRLNPIKGHRFFLEAASIVLQSYPNIRFLVVGDGDLRTELQEQAERLGITDSVIFTGFRSDAF
SIISAMDILVISSLSEGGPLTLFEAMAAGTAVIATNVIGLSHFVKPGESGYLVPSQDSEALANRILELVQDQELCEKMGH
VAKSMIQKQDNKSTVKAIEQCYEAVLQSSTKSRNLPDQTLAHQISMRS
>Mature_288_residues
MLTHIPAVVHEHMVDESMPPYFKLLDYLLSRWTERGIAISDAVAKFMETSRHIPSHLVDVIPNGIPLEKFENIDSHQASS
WKDEFSISNEHQLVGIVGRLNPIKGHRFFLEAASIVLQSYPNIRFLVVGDGDLRTELQEQAERLGITDSVIFTGFRSDAF
SIISAMDILVISSLSEGGPLTLFEAMAAGTAVIATNVIGLSHFVKPGESGYLVPSQDSEALANRILELVQDQELCEKMGH
VAKSMIQKQDNKSTVKAIEQCYEAVLQSSTKSRNLPDQTLAHQISMRS

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 31902; Mature: 31902

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHIPAVVHEHMVDESMPPYFKLLDYLLSRWTERGIAISDAVAKFMETSRHIPSHLVDV
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHH
IPNGIPLEKFENIDSHQASSWKDEFSISNEHQLVGIVGRLNPIKGHRFFLEAASIVLQSY
CCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHCC
PNIRFLVVGDGDLRTELQEQAERLGITDSVIFTGFRSDAFSIISAMDILVISSLSEGGPL
CCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCH
TLFEAMAAGTAVIATNVIGLSHFVKPGESGYLVPSQDSEALANRILELVQDQELCEKMGH
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VAKSMIQKQDNKSTVKAIEQCYEAVLQSSTKSRNLPDQTLAHQISMRS
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLTHIPAVVHEHMVDESMPPYFKLLDYLLSRWTERGIAISDAVAKFMETSRHIPSHLVDV
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHH
IPNGIPLEKFENIDSHQASSWKDEFSISNEHQLVGIVGRLNPIKGHRFFLEAASIVLQSY
CCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHCC
PNIRFLVVGDGDLRTELQEQAERLGITDSVIFTGFRSDAFSIISAMDILVISSLSEGGPL
CCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCH
TLFEAMAAGTAVIATNVIGLSHFVKPGESGYLVPSQDSEALANRILELVQDQELCEKMGH
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VAKSMIQKQDNKSTVKAIEQCYEAVLQSSTKSRNLPDQTLAHQISMRS
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]