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The map label for this gene is yebA [H]

Identifier: 158335828

GI number: 158335828

Start: 2721685

End: 2722638

Strand: Reverse

Name: yebA [H]

Synonym: AM1_2683

Alternate gene names: 158335828

Gene position: 2722638-2721685 (Counterclockwise)

Preceding gene: 158335831

Following gene: 158335823

Centisome position: 41.86

GC content: 48.22

Gene sequence:

>954_bases
ATGCGTTCTCTCCTTCCGATCCCGAAACGCTTTCGGATCTTGATTACTCTAACAGGACAACGTTCCGTCAAATTCTCGGT
TAGTCCTATCCTCATCATTTTGGGCTTATCAATGGCTGCTGTTCCTGCAGTCTGGGCTGGTAAAACTTTTTACGCATTGC
AGCAAAGGCATGATCAGCTATCAGAATCAGCTGCTGAAGTGTTAGAAGAGCTAGAAGTGTTAGACGGAGAAGTCGAAAAA
CTTCGTCAGCGAGCTGGATTATCCAAAGCAGAGCGCCAGCAAGTCAAGCTAGAAGTCTTAGATGAAGAAGTCAAAAAACT
CCGTCAGCGAACTGGGTTATCTCAAGTAGAGCGCCAACAAATCAAGCTTAAGGGTGGTAAAGGTGGAGTTCCTGTGGTTT
TGGATACGGAACAGCAGCTGAAATTTGCCAAAACCCGCTTGCCTGCGTTGACTTCTCGCCTTAAGCAGCAGGTTCAACCA
GCCCTAGAAAAGACGCTACAAGCGGAAGAAGCCCGTAATGCGGCTTTGCCTCAGGGTAAGCCGACGAAAGGTCATAGTCC
TATTTCGTCTGATTTTGGTTTACGCTCCGGTCCTTTTGGGGGGCGTGCTGAAATCCATGACGGCATAGATTTATTGGGAG
ATTATGGGTCTCCCATTTATGCAACAGCCAGCGGCAAGATTGAGCGAGCGGGTTATTCGGGTGGCTATGGGTATCATGTG
GTGATTCAGCATGGTTATGGATACCAAACCCTGTATGCCCATCTTTCTAAGCTAACGGTTAAACCCAATACGTCCGTTAA
GCGAGGACAGCTGCTGGGCTTTATGGGAAGTACGGGGCGATCGACAGGGACTCATTTGCATTACTCAATTTATCGTAGTG
AGAAGCCAGTCGATCCGAAGCCTTATATGGTGTCTAAGCAGCTGCGCGACCAGGTCTTTGCCTCAGTTCCTTAA

Upstream 100 bases:

>100_bases
GCACCCCCAAGTTTAGTATTCGCCTTGTTTTTTAAGAAATATTTAATATTGACCTCATAATTTGATATGATTCTTCACGA
ATCCTTTGTGTTGGGCCTTT

Downstream 100 bases:

>100_bases
GGCAAGTTGGCGAGGGTTTGCAAGGCTTTGTTAACGTAAGATCCGATATTCCTAACTAAATTGCTAATGTGATGTGGGTC
ATCGGGAATCTGAGCCATCA

Product: M23 peptidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MRSLLPIPKRFRILITLTGQRSVKFSVSPILIILGLSMAAVPAVWAGKTFYALQQRHDQLSESAAEVLEELEVLDGEVEK
LRQRAGLSKAERQQVKLEVLDEEVKKLRQRTGLSQVERQQIKLKGGKGGVPVVLDTEQQLKFAKTRLPALTSRLKQQVQP
ALEKTLQAEEARNAALPQGKPTKGHSPISSDFGLRSGPFGGRAEIHDGIDLLGDYGSPIYATASGKIERAGYSGGYGYHV
VIQHGYGYQTLYAHLSKLTVKPNTSVKRGQLLGFMGSTGRSTGTHLHYSIYRSEKPVDPKPYMVSKQLRDQVFASVP

Sequences:

>Translated_317_residues
MRSLLPIPKRFRILITLTGQRSVKFSVSPILIILGLSMAAVPAVWAGKTFYALQQRHDQLSESAAEVLEELEVLDGEVEK
LRQRAGLSKAERQQVKLEVLDEEVKKLRQRTGLSQVERQQIKLKGGKGGVPVVLDTEQQLKFAKTRLPALTSRLKQQVQP
ALEKTLQAEEARNAALPQGKPTKGHSPISSDFGLRSGPFGGRAEIHDGIDLLGDYGSPIYATASGKIERAGYSGGYGYHV
VIQHGYGYQTLYAHLSKLTVKPNTSVKRGQLLGFMGSTGRSTGTHLHYSIYRSEKPVDPKPYMVSKQLRDQVFASVP
>Mature_317_residues
MRSLLPIPKRFRILITLTGQRSVKFSVSPILIILGLSMAAVPAVWAGKTFYALQQRHDQLSESAAEVLEELEVLDGEVEK
LRQRAGLSKAERQQVKLEVLDEEVKKLRQRTGLSQVERQQIKLKGGKGGVPVVLDTEQQLKFAKTRLPALTSRLKQQVQP
ALEKTLQAEEARNAALPQGKPTKGHSPISSDFGLRSGPFGGRAEIHDGIDLLGDYGSPIYATASGKIERAGYSGGYGYHV
VIQHGYGYQTLYAHLSKLTVKPNTSVKRGQLLGFMGSTGRSTGTHLHYSIYRSEKPVDPKPYMVSKQLRDQVFASVP

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=120, Percent_Identity=42.5, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI1789099, Length=106, Percent_Identity=39.622641509434, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 34927; Mature: 34927

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLLPIPKRFRILITLTGQRSVKFSVSPILIILGLSMAAVPAVWAGKTFYALQQRHDQL
CCCCCCCCCCEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SESAAEVLEELEVLDGEVEKLRQRAGLSKAERQQVKLEVLDEEVKKLRQRTGLSQVERQQ
HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IKLKGGKGGVPVVLDTEQQLKFAKTRLPALTSRLKQQVQPALEKTLQAEEARNAALPQGK
EEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PTKGHSPISSDFGLRSGPFGGRAEIHDGIDLLGDYGSPIYATASGKIERAGYSGGYGYHV
CCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHCCCCCCEEEECCCCEEECCCCCCCEEEE
VIQHGYGYQTLYAHLSKLTVKPNTSVKRGQLLGFMGSTGRSTGTHLHYSIYRSEKPVDPK
EEECCCCHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCC
PYMVSKQLRDQVFASVP
CCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSLLPIPKRFRILITLTGQRSVKFSVSPILIILGLSMAAVPAVWAGKTFYALQQRHDQL
CCCCCCCCCCEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SESAAEVLEELEVLDGEVEKLRQRAGLSKAERQQVKLEVLDEEVKKLRQRTGLSQVERQQ
HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IKLKGGKGGVPVVLDTEQQLKFAKTRLPALTSRLKQQVQPALEKTLQAEEARNAALPQGK
EEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PTKGHSPISSDFGLRSGPFGGRAEIHDGIDLLGDYGSPIYATASGKIERAGYSGGYGYHV
CCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHCCCCCCEEEECCCCEEECCCCCCCEEEE
VIQHGYGYQTLYAHLSKLTVKPNTSVKRGQLLGFMGSTGRSTGTHLHYSIYRSEKPVDPK
EEECCCCHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCC
PYMVSKQLRDQVFASVP
CCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]