| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is yedW [C]
Identifier: 158335817
GI number: 158335817
Start: 2710221
End: 2710688
Strand: Direct
Name: yedW [C]
Synonym: AM1_2670
Alternate gene names: 158335817
Gene position: 2710221-2710688 (Clockwise)
Preceding gene: 158335816
Following gene: 158335818
Centisome position: 41.67
GC content: 42.52
Gene sequence:
>468_bases ATGCCAGTCTTAGATGGATATCAAGCAGCTCAACAAATCAAAACCCAACCTCAACCGCCTATTATTATCGCCTTGACTGC TAATGCTTTTGAGGAAGACCGTAGCAAAGCCTTAGCTAGTGGCTGTGACGATTATGTACGTAAGCCCTATAAGGAATCGA TCATTTGGGAAAAGCTGGCCGAGCATTTAGGGGTCCAATATCTTTACGCTGAAATTCAGAATGATGAAAGTTGTATTGAT GACTTTGGCTTAACTGCAGCTATTTTGCTCGCTATCTCTAGTCCGTGGCTTCAGAAGTTGCATGCTGCGGTGATTGAACT AAATTCGAATCAGGTTGATCAATTATTAACTGAGATTCCTAAAGAGCATCGTCGATTGAAATTAGCTATTTCTGAGCTGG CACAACAGTTTCGCTATGACGTACTCATGAACCTAACTCAAATGGCCCTGGAAGACCAGCCTAGCTAA
Upstream 100 bases:
>100_bases GGAATTAGTGGGATGCGAGGTTTGAGCCGTCAGTAATGGTCAAGATGCTGTAAATCAGTCAGAGCAATGGCAACCTGATT TAATTTGGTTAGATTTACGT
Downstream 100 bases:
>100_bases ACAAAGGTCGATTTACTTCAGTCGCTGCTGCTGGGGATACCTTTATCGGCGCTGTTGTTGGGAGCTGCGCGGAGCGTACT GCTGGAGCAGGACCCCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Two-Component Hybrid Sensor And Regulator; PAS Fold Family; Two-Component Hybrid Sensor And Regulator Histidine Kinase; Histidine Kinase; GAF Sensor Hybrid Histidine Kinase; Two-Component Hybrid Histidine Kinase Sensor And Regulator; ATPase Histidine Kinase- DNA Gyrase B- And; Response Regulator Receiver Domain Protein; Two-Component Hybrid Sensory Histidine Kinase; Two-Component Hybrid Histidine Kinase; GAF Domain Protein; Hybrid Sensory Kinase; PAS/PAC Sensor Hybrid Histidine Kinase
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPVLDGYQAAQQIKTQPQPPIIIALTANAFEEDRSKALASGCDDYVRKPYKESIIWEKLAEHLGVQYLYAEIQNDESCID DFGLTAAILLAISSPWLQKLHAAVIELNSNQVDQLLTEIPKEHRRLKLAISELAQQFRYDVLMNLTQMALEDQPS
Sequences:
>Translated_155_residues MPVLDGYQAAQQIKTQPQPPIIIALTANAFEEDRSKALASGCDDYVRKPYKESIIWEKLAEHLGVQYLYAEIQNDESCID DFGLTAAILLAISSPWLQKLHAAVIELNSNQVDQLLTEIPKEHRRLKLAISELAQQFRYDVLMNLTQMALEDQPS >Mature_154_residues PVLDGYQAAQQIKTQPQPPIIIALTANAFEEDRSKALASGCDDYVRKPYKESIIWEKLAEHLGVQYLYAEIQNDESCIDD FGLTAAILLAISSPWLQKLHAAVIELNSNQVDQLLTEIPKEHRRLKLAISELAQQFRYDVLMNLTQMALEDQPS
Specific function: Probable Member Of A Two-Component Regulatory System Yedw/Yedv. [C]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17525; Mature: 17394
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLDGYQAAQQIKTQPQPPIIIALTANAFEEDRSKALASGCDDYVRKPYKESIIWEKLA CCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHH EHLGVQYLYAEIQNDESCIDDFGLTAAILLAISSPWLQKLHAAVIELNSNQVDQLLTEIP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHH KEHRRLKLAISELAQQFRYDVLMNLTQMALEDQPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PVLDGYQAAQQIKTQPQPPIIIALTANAFEEDRSKALASGCDDYVRKPYKESIIWEKLA CCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHH EHLGVQYLYAEIQNDESCIDDFGLTAAILLAISSPWLQKLHAAVIELNSNQVDQLLTEIP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHH KEHRRLKLAISELAQQFRYDVLMNLTQMALEDQPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA