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The map label for this gene is 158335792

Identifier: 158335792

GI number: 158335792

Start: 2682282

End: 2683580

Strand: Reverse

Name: 158335792

Synonym: AM1_2643

Alternate gene names: NA

Gene position: 2683580-2682282 (Counterclockwise)

Preceding gene: 158335796

Following gene: 158335791

Centisome position: 41.26

GC content: 50.12

Gene sequence:

>1299_bases
ATGAGTGCCCCGTTATTTCAACAAGGCCAAGCGCAGCTGCGGCAAAAGCAATATGCAGATGCGATCGCAACCTTCACCCA
AGTTCTGGACGCCGATCCCTTTTCCATCGGTGCCTATTGTCAACGGGGGTTGGCCTACTATGATTCTGGTAACGTCTATG
CCGCGATTGAAGACTACGGTAAGGCCCTAGAAATTGACTCTAAATCGGCCAAAGCCTATTACTGTCGAGCCTTAGCCCGA
CTCTCCTTAAAAAATATCCCAGGAACGATGGCTGATATTGAACTGGCGATTGGGTGCGATCGTACCTATGCTGCAGCTTA
TAAATTGCGAGCCATTGTCCATCGCAAGCAAGGGGATATCCAAGCAGCAATCGCTGATTTTAAGGTAGCTTCAGGACTCT
ATCTCGATCAAAAAGATGCAGATGGAGCCCGTCAATGCATTGACAAGATTGAGGAAATCCGACCCAAAACGCCCAATGCT
CGCGCTCCAATCACAAAGGCACCCAACGCACCGCCCCCTGCCCTATCAGAAAAAGATTACTTTACGCAAATCCTCGATCG
GGCCAAAATCGGCCAGCTCAGTCAGGCCCTCTCGGATATTAATTGGGTCTTGCAGGCCGATCCTCAGGACGGCAAAGCCT
ATTGCTGCCGGGGATTAGTCTATTGCAAGCAGGGCAATTATCAGGCTGCCATGGCCGATTTTAATCAAGCCCTTACCCTT
AAATTTGAGGATCCGATTACCTATCGTGGGCGGAGCAAAGCTCGCTTAAACCTCAAGGATCCCCAGGGGGCGATTGCAGA
CTGTAATCAAGCCTTATTCTTGTCTTCTGAAGATAGTGATGCCTATGTGGCACGAGGCAATGCCTACCGAGCCATCGGCC
ATCATTTAGGAGCAATCGAAGACTATGCGGAAGCCTTACGTTTGAATGGAAATAACGCCGATGCCTTTTTTCAGCGCGGC
CTTACCTATGCGGGGATGAAGGAAAATCCCCAAGCCATTGCCGATTACCAGCGGGCCATTAGCCTGTTCTGTGCCCAAGA
AGAATGGTTCAACTATCAGCAGGTTCTCGCCCAACTCAATCAGCTGAAACCTCCTACCCAGACAAATGTTCAGGCTCCGC
CACCTCAACCACCACAAACGACCTATGAGCGCTTGTGGCAGCGGTTATTGGACTTATTGGGAGGAAACCAAGAGTTAGCG
AAAGGGATGGTTCGGAGCACGAAATTTCAATATCCGGGGCGCTCAGAGGAGTGGTACTTAGAGACGGTAATTCTGAGTCT
GGAAGACCATATGAGATAA

Upstream 100 bases:

>100_bases
GTAGGTCCTTCTCAGGCAATGAGAGTATTGGTTAGGATATTGATCTTATCCAGCAGGGATAGCCTGTTGGTTTTAGATCT
GCACCACCATCAGAGTGCCC

Downstream 100 bases:

>100_bases
AAGCCGGAGTGATTGAACCGACCTGACCCGACTTTTTCTTCAGAACTCCCGACTTCAGCCGACTGACAGGACCAGATGGG
CAAAGCTAGGCTGTGCTTAA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Peptidase; Tetratricopeptide Repeat-Containing Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; O-Linked GlcNAc Transferase; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Family Protein; TPR Repeat-Containing ; TPR-Repeat-Containing Protein; TPR Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; DNAJ Domain Protein; O-Linked GlcNAc Transferase Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; TPR Repeat- And Protein Kinase Domain-Containing Protein; Pentapeptide Repeat-Containing Serine/Threonine Kinase; DNAJ-Like Protein; Mitochondrial Outer Membrane; Tfp Pilus Assembly Protein PilF; TPR Repeat-Containing Protein Kinase; Periplasmic Protein; Peptidase S

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MSAPLFQQGQAQLRQKQYADAIATFTQVLDADPFSIGAYCQRGLAYYDSGNVYAAIEDYGKALEIDSKSAKAYYCRALAR
LSLKNIPGTMADIELAIGCDRTYAAAYKLRAIVHRKQGDIQAAIADFKVASGLYLDQKDADGARQCIDKIEEIRPKTPNA
RAPITKAPNAPPPALSEKDYFTQILDRAKIGQLSQALSDINWVLQADPQDGKAYCCRGLVYCKQGNYQAAMADFNQALTL
KFEDPITYRGRSKARLNLKDPQGAIADCNQALFLSSEDSDAYVARGNAYRAIGHHLGAIEDYAEALRLNGNNADAFFQRG
LTYAGMKENPQAIADYQRAISLFCAQEEWFNYQQVLAQLNQLKPPTQTNVQAPPPQPPQTTYERLWQRLLDLLGGNQELA
KGMVRSTKFQYPGRSEEWYLETVILSLEDHMR

Sequences:

>Translated_432_residues
MSAPLFQQGQAQLRQKQYADAIATFTQVLDADPFSIGAYCQRGLAYYDSGNVYAAIEDYGKALEIDSKSAKAYYCRALAR
LSLKNIPGTMADIELAIGCDRTYAAAYKLRAIVHRKQGDIQAAIADFKVASGLYLDQKDADGARQCIDKIEEIRPKTPNA
RAPITKAPNAPPPALSEKDYFTQILDRAKIGQLSQALSDINWVLQADPQDGKAYCCRGLVYCKQGNYQAAMADFNQALTL
KFEDPITYRGRSKARLNLKDPQGAIADCNQALFLSSEDSDAYVARGNAYRAIGHHLGAIEDYAEALRLNGNNADAFFQRG
LTYAGMKENPQAIADYQRAISLFCAQEEWFNYQQVLAQLNQLKPPTQTNVQAPPPQPPQTTYERLWQRLLDLLGGNQELA
KGMVRSTKFQYPGRSEEWYLETVILSLEDHMR
>Mature_431_residues
SAPLFQQGQAQLRQKQYADAIATFTQVLDADPFSIGAYCQRGLAYYDSGNVYAAIEDYGKALEIDSKSAKAYYCRALARL
SLKNIPGTMADIELAIGCDRTYAAAYKLRAIVHRKQGDIQAAIADFKVASGLYLDQKDADGARQCIDKIEEIRPKTPNAR
APITKAPNAPPPALSEKDYFTQILDRAKIGQLSQALSDINWVLQADPQDGKAYCCRGLVYCKQGNYQAAMADFNQALTLK
FEDPITYRGRSKARLNLKDPQGAIADCNQALFLSSEDSDAYVARGNAYRAIGHHLGAIEDYAEALRLNGNNADAFFQRGL
TYAGMKENPQAIADYQRAISLFCAQEEWFNYQQVLAQLNQLKPPTQTNVQAPPPQPPQTTYERLWQRLLDLLGGNQELAK
GMVRSTKFQYPGRSEEWYLETVILSLEDHMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI310123097, Length=384, Percent_Identity=23.1770833333333, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI310110582, Length=384, Percent_Identity=23.1770833333333, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI310131789, Length=384, Percent_Identity=23.1770833333333, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48160; Mature: 48029

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPLFQQGQAQLRQKQYADAIATFTQVLDADPFSIGAYCQRGLAYYDSGNVYAAIEDYG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCEEEEEHHCC
KALEIDSKSAKAYYCRALARLSLKNIPGTMADIELAIGCDRTYAAAYKLRAIVHRKQGDI
CEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHCCCCH
QAAIADFKVASGLYLDQKDADGARQCIDKIEEIRPKTPNARAPITKAPNAPPPALSEKDY
HHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
FTQILDRAKIGQLSQALSDINWVLQADPQDGKAYCCRGLVYCKQGNYQAAMADFNQALTL
HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCEEEEECCCCHHHHHCCCCEEEE
KFEDPITYRGRSKARLNLKDPQGAIADCNQALFLSSEDSDAYVARGNAYRAIGHHLGAIE
EECCCCCCCCCCCEEEECCCCCCCHHCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHH
DYAEALRLNGNNADAFFQRGLTYAGMKENPQAIADYQRAISLFCAQEEWFNYQQVLAQLN
HHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QLKPPTQTNVQAPPPQPPQTTYERLWQRLLDLLGGNQELAKGMVRSTKFQYPGRSEEWYL
HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHH
ETVILSLEDHMR
HHHHHHHHHHCC
>Mature Secondary Structure 
SAPLFQQGQAQLRQKQYADAIATFTQVLDADPFSIGAYCQRGLAYYDSGNVYAAIEDYG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCEEEEEHHCC
KALEIDSKSAKAYYCRALARLSLKNIPGTMADIELAIGCDRTYAAAYKLRAIVHRKQGDI
CEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHCCCCH
QAAIADFKVASGLYLDQKDADGARQCIDKIEEIRPKTPNARAPITKAPNAPPPALSEKDY
HHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
FTQILDRAKIGQLSQALSDINWVLQADPQDGKAYCCRGLVYCKQGNYQAAMADFNQALTL
HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCEEEEECCCCHHHHHCCCCEEEE
KFEDPITYRGRSKARLNLKDPQGAIADCNQALFLSSEDSDAYVARGNAYRAIGHHLGAIE
EECCCCCCCCCCCEEEECCCCCCCHHCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHH
DYAEALRLNGNNADAFFQRGLTYAGMKENPQAIADYQRAISLFCAQEEWFNYQQVLAQLN
HHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QLKPPTQTNVQAPPPQPPQTTYERLWQRLLDLLGGNQELAKGMVRSTKFQYPGRSEEWYL
HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHH
ETVILSLEDHMR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA