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The map label for this gene is fraH [H]

Identifier: 158335787

GI number: 158335787

Start: 2677464

End: 2678231

Strand: Direct

Name: fraH [H]

Synonym: AM1_2638

Alternate gene names: 158335787

Gene position: 2677464-2678231 (Clockwise)

Preceding gene: 158335786

Following gene: 158335788

Centisome position: 41.17

GC content: 48.31

Gene sequence:

>768_bases
ATGATTATTTGTCCCAATTGTCTCCACCAAAATGCCGATGGCGCAGCGACCTGTGAGGCCTGTCAGACTGCATTACCTTC
CACTAGCAGCTGTCCCAACTGTGGTGCATCCATACAGGTAGGCGCACAATTCTGCGGTCAATGTGGTTTTAATCTACAAG
ACGATCCCAACGACTTAGATGAAATTATCGCTCTCACCACCGAGACAGCAAAACCCGAACCCGCATCTCCAGAGAACCCA
TTTATTTTTCCCGATCCTCAACCCCCTGATCCGCTCGTCATGCCGGATTTAGTATCGCAGGAACCCTTAGCAGAACCATC
ATTAGCCGCGGATTTACCTGTCCTGGACAACAATTTGTCTCAGTTTGAAGAAACGCCACCTCCTTCTTCAGCCTATGGGG
ATAACGAGTCGCCGGGTACGCCCCGAACTCAACTCCAACAGCAAACCATTCAGCTAGTCCATGTTCAGACCAACACAGTG
ATTGATCTGCCTTGGACACTGGATAAAATTCATATGGGAAAACCTAACGATCGAGTGCCGCCCGACATCGACGTGTCAGG
GTTCCCAAATGCTGAAGTTGTTTCTCGCGTTCATGCGGATATTCGGGTTGAAGGGGGTCATTATTTTATTGAAGATGTCG
GCAGCTCAAATGGGACCTACATCAACAGTATTCCTTTGTTACCTGGTAATCGGCATCGTCTACGCGTCGGTGATCGAATC
GCTTTGGGTAAAGGCAATTTAGTCACTTTTCTATTCCAACTTAACTGA

Upstream 100 bases:

>100_bases
GTTTTATCGCCTATTGAGCTAACGATTCGATAAGTCTTATCGGCCGCCTAAATTTGACTATGATCGGGGAATTTTTTGAC
GGGGGAAATAACTACAACCT

Downstream 100 bases:

>100_bases
TAACGTGATTACTCTAACGCTCTTACATCCTGTCCAATCCACTCCCGTTCAAAGTTGGAGCTTTGAGCAAGATCCCGTCA
TCCGAATTGGTCGAGCGGTA

Product: FHA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIICPNCLHQNADGAATCEACQTALPSTSSCPNCGASIQVGAQFCGQCGFNLQDDPNDLDEIIALTTETAKPEPASPENP
FIFPDPQPPDPLVMPDLVSQEPLAEPSLAADLPVLDNNLSQFEETPPPSSAYGDNESPGTPRTQLQQQTIQLVHVQTNTV
IDLPWTLDKIHMGKPNDRVPPDIDVSGFPNAEVVSRVHADIRVEGGHYFIEDVGSSNGTYINSIPLLPGNRHRLRVGDRI
ALGKGNLVTFLFQLN

Sequences:

>Translated_255_residues
MIICPNCLHQNADGAATCEACQTALPSTSSCPNCGASIQVGAQFCGQCGFNLQDDPNDLDEIIALTTETAKPEPASPENP
FIFPDPQPPDPLVMPDLVSQEPLAEPSLAADLPVLDNNLSQFEETPPPSSAYGDNESPGTPRTQLQQQTIQLVHVQTNTV
IDLPWTLDKIHMGKPNDRVPPDIDVSGFPNAEVVSRVHADIRVEGGHYFIEDVGSSNGTYINSIPLLPGNRHRLRVGDRI
ALGKGNLVTFLFQLN
>Mature_255_residues
MIICPNCLHQNADGAATCEACQTALPSTSSCPNCGASIQVGAQFCGQCGFNLQDDPNDLDEIIALTTETAKPEPASPENP
FIFPDPQPPDPLVMPDLVSQEPLAEPSLAADLPVLDNNLSQFEETPPPSSAYGDNESPGTPRTQLQQQTIQLVHVQTNTV
IDLPWTLDKIHMGKPNDRVPPDIDVSGFPNAEVVSRVHADIRVEGGHYFIEDVGSSNGTYINSIPLLPGNRHRLRVGDRI
ALGKGNLVTFLFQLN

Specific function: Putative heterocyst to vegetative cell connection [H]

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FHA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000253
- InterPro:   IPR008984 [H]

Pfam domain/function: PF00498 FHA [H]

EC number: NA

Molecular weight: Translated: 27468; Mature: 27468

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIICPNCLHQNADGAATCEACQTALPSTSSCPNCGASIQVGAQFCGQCGFNLQDDPNDLD
CEECCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCHHH
EIIALTTETAKPEPASPENPFIFPDPQPPDPLVMPDLVSQEPLAEPSLAADLPVLDNNLS
HHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHCCCHH
QFEETPPPSSAYGDNESPGTPRTQLQQQTIQLVHVQTNTVIDLPWTLDKIHMGKPNDRVP
HHHCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEECCEEEECCCCCCEEECCCCCCCCC
PDIDVSGFPNAEVVSRVHADIRVEGGHYFIEDVGSSNGTYINSIPLLPGNRHRLRVGDRI
CCCCCCCCCCHHHHHHHCCCEEECCCEEEEEECCCCCCCEEEEECCCCCCCCEEEECCEE
ALGKGNLVTFLFQLN
EECCCCEEEEEEEEC
>Mature Secondary Structure
MIICPNCLHQNADGAATCEACQTALPSTSSCPNCGASIQVGAQFCGQCGFNLQDDPNDLD
CEECCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCHHH
EIIALTTETAKPEPASPENPFIFPDPQPPDPLVMPDLVSQEPLAEPSLAADLPVLDNNLS
HHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHCCCHH
QFEETPPPSSAYGDNESPGTPRTQLQQQTIQLVHVQTNTVIDLPWTLDKIHMGKPNDRVP
HHHCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEECCEEEECCCCCCEEECCCCCCCCC
PDIDVSGFPNAEVVSRVHADIRVEGGHYFIEDVGSSNGTYINSIPLLPGNRHRLRVGDRI
CCCCCCCCCCHHHHHHHCCCEEECCCEEEEEECCCCCCCEEEEECCCCCCCCEEEECCEE
ALGKGNLVTFLFQLN
EECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]