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The map label for this gene is devC

Identifier: 158335722

GI number: 158335722

Start: 2611062

End: 2612315

Strand: Direct

Name: devC

Synonym: AM1_2572

Alternate gene names: NA

Gene position: 2611062-2612315 (Clockwise)

Preceding gene: 158335721

Following gene: 158335723

Centisome position: 40.15

GC content: 50.32

Gene sequence:

>1254_bases
ATGAAATGGGGCCGCCTGCGCAATTTAACGGCTGAACGCCCCTTAGCTTGGGCGCAGCTATCTCATCAAAAGGCACGTTT
AGCTGTTGCCCTGACGGGGGTAGCTTTCGCCAATATCTTGATGTTTGCCCAGCTGGGGATTCGGGCAGTGCTGTTTGATG
GCATTACCTTAATTCATGAGAATCTCCAGGGTGAGCTGTTCCTGATATCGTCTTACTCTCGGGCCTTAGGATTTCAGGCC
TTTGCACGGATTTACCTATATCAAGCAAATTCTGTTCCGGGGGTTGCTTCAGCGAGGCCTCTCTATATTTTGGGGCGGGT
GGACTGGATCAATCCGGAGCAACTCCCCGATGAGCATCCGATTCCACCGGAGTTACTGTCTCCTCCAGGGCAAGGCGAGT
CGGCAGATAAAGAGATTCAAATTTTTCCAGATCGGGTTAAAATCTTAGCCTTTAACCTCTCTCAGCCTGCTTTTACCCTA
CCCGAAATCAATCAGCAACTGGACAAGTTGAAGGAACCCGATTCGATTCTCTTTGACCGGCTGTCTCAGGATGGGTTGGG
ACCGATTTCCGATTTAATTACGCAGAAACCCCAGTTAACAACGGTGATGGGAAATCGCCGCACTCAAATTGCTGGATTAT
TTACCTTAGGGAGCACGCTGTTCACCAAAGGGCATGTAATTATGAGTGACTTGAACTATGCCGCCCGCAATGGCCCCGAG
AGTTTAGAGAATGTCAGTGTGGGATTGGTGAGTTTGGATGCAGGTGCTGACCCCCTGCAAGTTAAAGCGCAAATCCAACA
AGCCTTACCGCCTTCTATCCAGGTGTTAACTCGAGAAGAACTGATCCAAAAAGAAGTGGCGTTCTGGGAAACGGATCCGA
GTGGCACGGTCCTTAATTTTGGGGCGATGATGGGGTTTGTGGTGGGGGTGATTGTGGTGTATCAGGTCCTATACTCGGAT
GTGCTGGAACATCTACCCGAATATGCCACCTTGAAGGCGATGGGGTTTGCAGATAATGCTCTGCTGCGGGTTGTTCTGCA
GGAAGCCATGATTTTAGCGGTGTTGGGTTTTGTGCCTGGGTGCGTGGCCTCTGTCGGGGTCTATAGCCTGCTCAGTTCTC
TAACCAAAATCCCCTTGAGTTTGCGACCCGATGTGATGGCCCAGGTGTTTATCTTAACGATTGTTATGTGTATGGGAGCG
GGTGGAATTGCAACTCAGAAGCTACGCCAAGCCGACCCTGCGGATGTATTTTAA

Upstream 100 bases:

>100_bases
TCAATGTTTCCATTCGCATCGATCCAGACGATAGCCCCATTGTCGCTGGCCTGACGAATATGCAAGTCAGAGTCACCATT
GACTTACAGGAGAAGGCCGG

Downstream 100 bases:

>100_bases
CCGATGGAACCTGTTGTTTCGATCCGTCATCTGAATCATGCCTTTGGCAAAGGGCAGTTACGGAAGCCTGTGCTGAAGGA
TATTAGTCTGGATCTCAATC

Product: DevC protein

Products: NA

Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MKWGRLRNLTAERPLAWAQLSHQKARLAVALTGVAFANILMFAQLGIRAVLFDGITLIHENLQGELFLISSYSRALGFQA
FARIYLYQANSVPGVASARPLYILGRVDWINPEQLPDEHPIPPELLSPPGQGESADKEIQIFPDRVKILAFNLSQPAFTL
PEINQQLDKLKEPDSILFDRLSQDGLGPISDLITQKPQLTTVMGNRRTQIAGLFTLGSTLFTKGHVIMSDLNYAARNGPE
SLENVSVGLVSLDAGADPLQVKAQIQQALPPSIQVLTREELIQKEVAFWETDPSGTVLNFGAMMGFVVGVIVVYQVLYSD
VLEHLPEYATLKAMGFADNALLRVVLQEAMILAVLGFVPGCVASVGVYSLLSSLTKIPLSLRPDVMAQVFILTIVMCMGA
GGIATQKLRQADPADVF

Sequences:

>Translated_417_residues
MKWGRLRNLTAERPLAWAQLSHQKARLAVALTGVAFANILMFAQLGIRAVLFDGITLIHENLQGELFLISSYSRALGFQA
FARIYLYQANSVPGVASARPLYILGRVDWINPEQLPDEHPIPPELLSPPGQGESADKEIQIFPDRVKILAFNLSQPAFTL
PEINQQLDKLKEPDSILFDRLSQDGLGPISDLITQKPQLTTVMGNRRTQIAGLFTLGSTLFTKGHVIMSDLNYAARNGPE
SLENVSVGLVSLDAGADPLQVKAQIQQALPPSIQVLTREELIQKEVAFWETDPSGTVLNFGAMMGFVVGVIVVYQVLYSD
VLEHLPEYATLKAMGFADNALLRVVLQEAMILAVLGFVPGCVASVGVYSLLSSLTKIPLSLRPDVMAQVFILTIVMCMGA
GGIATQKLRQADPADVF
>Mature_417_residues
MKWGRLRNLTAERPLAWAQLSHQKARLAVALTGVAFANILMFAQLGIRAVLFDGITLIHENLQGELFLISSYSRALGFQA
FARIYLYQANSVPGVASARPLYILGRVDWINPEQLPDEHPIPPELLSPPGQGESADKEIQIFPDRVKILAFNLSQPAFTL
PEINQQLDKLKEPDSILFDRLSQDGLGPISDLITQKPQLTTVMGNRRTQIAGLFTLGSTLFTKGHVIMSDLNYAARNGPE
SLENVSVGLVSLDAGADPLQVKAQIQQALPPSIQVLTREELIQKEVAFWETDPSGTVLNFGAMMGFVVGVIVVYQVLYSD
VLEHLPEYATLKAMGFADNALLRVVLQEAMILAVLGFVPGCVASVGVYSLLSSLTKIPLSLRPDVMAQVFILTIVMCMGA
GGIATQKLRQADPADVF

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:
GO:0005886: DevC protein, putative
GO:0016020: DevC protein, putative
GO:0016021: DevC protein, putative

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45490; Mature: 45490

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWGRLRNLTAERPLAWAQLSHQKARLAVALTGVAFANILMFAQLGIRAVLFDGITLIHE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLQGELFLISSYSRALGFQAFARIYLYQANSVPGVASARPLYILGRVDWINPEQLPDEHP
CCCCCEEEEECHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECCCCHHHCCCCCC
IPPELLSPPGQGESADKEIQIFPDRVKILAFNLSQPAFTLPEINQQLDKLKEPDSILFDR
CCHHHCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHH
LSQDGLGPISDLITQKPQLTTVMGNRRTQIAGLFTLGSTLFTKGHVIMSDLNYAARNGPE
HCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHCCCCH
SLENVSVGLVSLDAGADPLQVKAQIQQALPPSIQVLTREELIQKEVAFWETDPSGTVLNF
HHHHHEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHH
GAMMGFVVGVIVVYQVLYSDVLEHLPEYATLKAMGFADNALLRVVLQEAMILAVLGFVPG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
CVASVGVYSLLSSLTKIPLSLRPDVMAQVFILTIVMCMGAGGIATQKLRQADPADVF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKWGRLRNLTAERPLAWAQLSHQKARLAVALTGVAFANILMFAQLGIRAVLFDGITLIHE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLQGELFLISSYSRALGFQAFARIYLYQANSVPGVASARPLYILGRVDWINPEQLPDEHP
CCCCCEEEEECHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECCCCHHHCCCCCC
IPPELLSPPGQGESADKEIQIFPDRVKILAFNLSQPAFTLPEINQQLDKLKEPDSILFDR
CCHHHCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHH
LSQDGLGPISDLITQKPQLTTVMGNRRTQIAGLFTLGSTLFTKGHVIMSDLNYAARNGPE
HCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHCCCCH
SLENVSVGLVSLDAGADPLQVKAQIQQALPPSIQVLTREELIQKEVAFWETDPSGTVLNF
HHHHHEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHH
GAMMGFVVGVIVVYQVLYSDVLEHLPEYATLKAMGFADNALLRVVLQEAMILAVLGFVPG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
CVASVGVYSLLSSLTKIPLSLRPDVMAQVFILTIVMCMGAGGIATQKLRQADPADVF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA