| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158335624
Identifier: 158335624
GI number: 158335624
Start: 2498704
End: 2499468
Strand: Direct
Name: 158335624
Synonym: AM1_2474
Alternate gene names: NA
Gene position: 2498704-2499468 (Clockwise)
Preceding gene: 158335620
Following gene: 158335625
Centisome position: 38.42
GC content: 50.59
Gene sequence:
>765_bases GTGCAAATTCAACTCGTTTGGACTGATCCAACTTCTGGTAAAACCTATCAGCCCCATTTTCAGCCTCCGGTTGCTTTGGG ACAAAGCTTTAATCTGATGCCTGCCACCCATCAAGGGCAAGCAGTGAGTCGAATTGTGCTCCATGATGACGCAGTACAGG CATTTCATGCTTTGTTGGAAGTGCGACAGAGTAGCGTTTGGTTATGCAGCCAGGCAGACAGCCAAATTAACGGGGTCACT GTTACTGAGGGAGTTTTAACCCATGGTGACCGAATTCAGATCGGTCCCTTTGAACTCACATTCACGCTTGTCCCAAAGCC AACCACCACCGAGGACCCCCTCCAAGATCAAGCATCGGCCATCAGTGGAGACTCTCGTTCTACCTCACTTTCGGGTATGG CCCAGATCCCTACAGAGCGCCCCGCGCAAACAGCACAGGCGAATCGTTCTTCTAGGGAATGGGTTTGCGATCGCAAAATC GGTTTCTTGTTCAAACGGAACTGCGATCGCACCACAGCATTGGGATGTCCCTACTGTCTCGATGGTCAAAGCAAGCTCAA CCAAGACCCTTACTGGTTAGACTATGACCTCTATCCTGGTTATGGCACCTATCGTCCCGGCAGTTGGGGCTATGAATACT ATCGTGATCGCGCTTACTACTGTTACAACCGCGAATCCCGAAACGTCGACTTTACGGAAGCGGATGCCGCCAGCTTTGAA GAGGAATTAGACACAGATTACGAGATGAATTTTGGGGCCAGCTAA
Upstream 100 bases:
>100_bases CCAGTGTTTGTGTATTGACAGATTAGTACCTTGAGAGCTTTACTCACTTCTCAAACAGCCTCTTAGATGAGGCCGCCTAT TCAACCTCCTGGTGCCAACG
Downstream 100 bases:
>100_bases TGGCCACTTGGCTGATTTATGCCTTAGGTGGTGGCTGGGGACATCTCAATCGGGCCATCGCTTTGGGCCGACAGGCCGCC CCTCAGCATCACGTTCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MQIQLVWTDPTSGKTYQPHFQPPVALGQSFNLMPATHQGQAVSRIVLHDDAVQAFHALLEVRQSSVWLCSQADSQINGVT VTEGVLTHGDRIQIGPFELTFTLVPKPTTTEDPLQDQASAISGDSRSTSLSGMAQIPTERPAQTAQANRSSREWVCDRKI GFLFKRNCDRTTALGCPYCLDGQSKLNQDPYWLDYDLYPGYGTYRPGSWGYEYYRDRAYYCYNRESRNVDFTEADAASFE EELDTDYEMNFGAS
Sequences:
>Translated_254_residues MQIQLVWTDPTSGKTYQPHFQPPVALGQSFNLMPATHQGQAVSRIVLHDDAVQAFHALLEVRQSSVWLCSQADSQINGVT VTEGVLTHGDRIQIGPFELTFTLVPKPTTTEDPLQDQASAISGDSRSTSLSGMAQIPTERPAQTAQANRSSREWVCDRKI GFLFKRNCDRTTALGCPYCLDGQSKLNQDPYWLDYDLYPGYGTYRPGSWGYEYYRDRAYYCYNRESRNVDFTEADAASFE EELDTDYEMNFGAS >Mature_254_residues MQIQLVWTDPTSGKTYQPHFQPPVALGQSFNLMPATHQGQAVSRIVLHDDAVQAFHALLEVRQSSVWLCSQADSQINGVT VTEGVLTHGDRIQIGPFELTFTLVPKPTTTEDPLQDQASAISGDSRSTSLSGMAQIPTERPAQTAQANRSSREWVCDRKI GFLFKRNCDRTTALGCPYCLDGQSKLNQDPYWLDYDLYPGYGTYRPGSWGYEYYRDRAYYCYNRESRNVDFTEADAASFE EELDTDYEMNFGAS
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28616; Mature: 28616
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIQLVWTDPTSGKTYQPHFQPPVALGQSFNLMPATHQGQAVSRIVLHDDAVQAFHALLE CEEEEEEECCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHH VRQSSVWLCSQADSQINGVTVTEGVLTHGDRIQIGPFELTFTLVPKPTTTEDPLQDQASA HHHCCEEEEECCCCCCCCEEEECHHEECCCEEEECCEEEEEEEECCCCCCCCCHHHHHHH ISGDSRSTSLSGMAQIPTERPAQTAQANRSSREWVCDRKIGFLFKRNCDRTTALGCPYCL HCCCCCCCCCCCCEECCCCCCCHHHHCCCCCCCEECCCHHCEEECCCCCCCCCCCCCEEE DGQSKLNQDPYWLDYDLYPGYGTYRPGSWGYEYYRDRAYYCYNRESRNVDFTEADAASFE CCHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCCCCHHHHH EELDTDYEMNFGAS HHCCCCCCCCCCCC >Mature Secondary Structure MQIQLVWTDPTSGKTYQPHFQPPVALGQSFNLMPATHQGQAVSRIVLHDDAVQAFHALLE CEEEEEEECCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHH VRQSSVWLCSQADSQINGVTVTEGVLTHGDRIQIGPFELTFTLVPKPTTTEDPLQDQASA HHHCCEEEEECCCCCCCCEEEECHHEECCCEEEECCEEEEEEEECCCCCCCCCHHHHHHH ISGDSRSTSLSGMAQIPTERPAQTAQANRSSREWVCDRKIGFLFKRNCDRTTALGCPYCL HCCCCCCCCCCCCEECCCCCCCHHHHCCCCCCCEECCCHHCEEECCCCCCCCCCCCCEEE DGQSKLNQDPYWLDYDLYPGYGTYRPGSWGYEYYRDRAYYCYNRESRNVDFTEADAASFE CCHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCCCCHHHHH EELDTDYEMNFGAS HHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA