| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is sfsA
Identifier: 158335493
GI number: 158335493
Start: 2344944
End: 2345675
Strand: Direct
Name: sfsA
Synonym: AM1_2341
Alternate gene names: 158335493
Gene position: 2344944-2345675 (Clockwise)
Preceding gene: 158335492
Following gene: 158335494
Centisome position: 36.06
GC content: 48.36
Gene sequence:
>732_bases ATGGCGGACTGGCTATATCAATATCCCCCTTTACTAGCAGGCACGTTGATCAAACGATATAAGCGTTTCCTAGCTGATAT TGAACTCGATACGGGTGAAGTCGTTACCGCCCATTGTCCGAACACCGGGCCTATGACCGGGATGTGTGCCCCCCATAGCC GGGTGCAAATTTCTCAAAGTAATAACCCGAAGCGCAAATTAGCCTATACCTGGGAGATGATTGAGGTTTGTGACACCGAA CCCACCTGGGTCGGGGTGAATACGCAAATCCCGAATCTAGTGGTCAAACAACTCCTTCAAAATCGTCTTTTGCCGACCTT AGGTGAGTATGATCAGGTCAAATCTGAGGTGCGTTATGGTCGAGAAAAAAGCCGTATTGATTTTTTGCTGACAGGCACCG CTCAGCCTGCCTATATCGAAGTTAAAAGTACGACTTGGGCCATCGAAAAACAGGCTTTATTCCCAGACACCGTTACGATC CGCGGCCAAAAACATATTCGAGAGTTGATATCGGTTTTACCTGCAGCCCAAGCTTACTTACTCTTCTTTATTAATCGGGC TGATTGCACAACATTTGCCCCGGGTGATCAGGCAGATCCAGAGTACGGAAAACTCCTCAGGGAAGCTGTGGCCACAGGGG TTGGGCTTTTACCCTGCCGCTTTGAGATTACCCCCGAAGGCATTCGCTATTTAGGGTTAGCAACGGTCGAAGAATCGTCT TTAACAAGATGA
Upstream 100 bases:
>100_bases CATCTGCATTGGCGCTTTACTGTATAAATCTGCCACTGGAGACAACACCAGGGGGACGCGGTAAATTAGTTCAGCCCCTG ATCCTAGAGAGTTAACGCAA
Downstream 100 bases:
>100_bases ACCGTAGTTTTAAATTAGTATGAGTATATTTCGCTGTTTTTTCTCTCAGCATCGAATTGATTTTGAGCGAGAAAAGCGAG ATCCTCGCCTGAGGATGTTA
Product: sugar fermentation stimulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MADWLYQYPPLLAGTLIKRYKRFLADIELDTGEVVTAHCPNTGPMTGMCAPHSRVQISQSNNPKRKLAYTWEMIEVCDTE PTWVGVNTQIPNLVVKQLLQNRLLPTLGEYDQVKSEVRYGREKSRIDFLLTGTAQPAYIEVKSTTWAIEKQALFPDTVTI RGQKHIRELISVLPAAQAYLLFFINRADCTTFAPGDQADPEYGKLLREAVATGVGLLPCRFEITPEGIRYLGLATVEESS LTR
Sequences:
>Translated_243_residues MADWLYQYPPLLAGTLIKRYKRFLADIELDTGEVVTAHCPNTGPMTGMCAPHSRVQISQSNNPKRKLAYTWEMIEVCDTE PTWVGVNTQIPNLVVKQLLQNRLLPTLGEYDQVKSEVRYGREKSRIDFLLTGTAQPAYIEVKSTTWAIEKQALFPDTVTI RGQKHIRELISVLPAAQAYLLFFINRADCTTFAPGDQADPEYGKLLREAVATGVGLLPCRFEITPEGIRYLGLATVEESS LTR >Mature_242_residues ADWLYQYPPLLAGTLIKRYKRFLADIELDTGEVVTAHCPNTGPMTGMCAPHSRVQISQSNNPKRKLAYTWEMIEVCDTEP TWVGVNTQIPNLVVKQLLQNRLLPTLGEYDQVKSEVRYGREKSRIDFLLTGTAQPAYIEVKSTTWAIEKQALFPDTVTIR GQKHIRELISVLPAAQAYLLFFINRADCTTFAPGDQADPEYGKLLREAVATGVGLLPCRFEITPEGIRYLGLATVEESSL TR
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=222, Percent_Identity=45.4954954954955, Blast_Score=187, Evalue=6e-49,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_ACAM1 (B0C250)
Other databases:
- EMBL: CP000828 - RefSeq: YP_001516665.1 - GeneID: 5681154 - GenomeReviews: CP000828_GR - KEGG: amr:AM1_2341 - HOGENOM: HBG655520 - OMA: NTGSMLN - BioCyc: AMAR329726:AM1_2341-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 27306; Mature: 27175
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADWLYQYPPLLAGTLIKRYKRFLADIELDTGEVVTAHCPNTGPMTGMCAPHSRVQISQS CCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECC NNPKRKLAYTWEMIEVCDTEPTWVGVNTQIPNLVVKQLLQNRLLPTLGEYDQVKSEVRYG CCCCCEEEEHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC REKSRIDFLLTGTAQPAYIEVKSTTWAIEKQALFPDTVTIRGQKHIRELISVLPAAQAYL CCCCCEEEEEECCCCCEEEEEECCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHEEE LFFINRADCTTFAPGDQADPEYGKLLREAVATGVGLLPCRFEITPEGIRYLGLATVEESS EEEEECCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCC LTR CCC >Mature Secondary Structure ADWLYQYPPLLAGTLIKRYKRFLADIELDTGEVVTAHCPNTGPMTGMCAPHSRVQISQS CCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECC NNPKRKLAYTWEMIEVCDTEPTWVGVNTQIPNLVVKQLLQNRLLPTLGEYDQVKSEVRYG CCCCCEEEEHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC REKSRIDFLLTGTAQPAYIEVKSTTWAIEKQALFPDTVTIRGQKHIRELISVLPAAQAYL CCCCCEEEEEECCCCCEEEEEECCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHEEE LFFINRADCTTFAPGDQADPEYGKLLREAVATGVGLLPCRFEITPEGIRYLGLATVEESS EEEEECCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCC LTR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA