| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158335486
Identifier: 158335486
GI number: 158335486
Start: 2337494
End: 2339050
Strand: Reverse
Name: 158335486
Synonym: AM1_2334
Alternate gene names: NA
Gene position: 2339050-2337494 (Counterclockwise)
Preceding gene: 158335487
Following gene: 158335483
Centisome position: 35.96
GC content: 49.13
Gene sequence:
>1557_bases ATGACATCCACCTTTCTTAATCGAGTCGGCAACTGGAATCCCCAGCTTCTGCGAGAATTCCGAGGTCGCCTCAAGTCCCG TAGTATTGCCGCCACAATTGTGGTCTCTTTAGTGGGGCAAACCCTGTTAGGACTAGTGTTCTCCCAGCAAACTTACAAAT CCGTTCTGGAACGCTGGGCAGGTTTAGCCGAAGCCATGATCTGGATTCTCCCGTTTGCGCTGTTTACTGCAGGCAGCTAC TACCTGGTGAGTGATCTCAATCAAGAAGAAAAACGGGGCACCCTCAATTTTATTCGGCTTAGCCCCCGTCCCAGTCGAGG AGTTTTATTGGGCAAAATGCTAGGGGTTCCGATCTTGCCGTACCTCGCCATTGGGCTGGCGATTCCGTTGCACATCATGG CTGGGCTGAATTCGGGAATGCCGATCTTTTTCTTAATCAGTTATTATTTGCTCCTGGCAGCCGGATGTTTTGCGCTATTC AGCCTGGCAATTCTGTATGGCTTGCTCAGCAGTTCTCGAACGATTGCAGTCGGGCAACAATCTGTAGTGGCTGTAGCGTT TGCCGGGCTAACGCTTTTCTTTCTGGCTCCCCTTTATATGACCTGGAATATGGCCGTGACTTGGCGGCCTTTAGGAATTA GTGAATGGTCTGCTCAATGGAATCCTTATCCCTATGCGGGAGAAGATCAAAACGCACCGATTCAATGGTTTGGGCAAACG ATCAATCAGTCTGCATTTTTTTCTCACTGGTTTACGTTATCTTTCCTGGCCATAGCTACGGCCCTGATTTGGTTGATGCT GGTCCGCTTATTTCGAAATCCCAATACGACCGTTATGAGTAAATGGCAAAGTTATGCCATTGTGGCTTTCCTAGAGCCAT TGGTGTTGGGCTTCTTCGTGGTGACGTCCGATCAGGCGAACTTTGCTGAGTCAACGGCAGAAGCAGGTACATGGCTCCTT TACGCGTTTAACATAGGTCTGACGATCGTGATCATGTTAGCCCTATGTCCTCAGCGAGCCTCTCTCCTCGACTGGGTGAG GTTTCAAAAGCACCCTCAGGGAATTTTGCGAGATTTAGTTTGGGCCGATAAAAGTCCGGCTATCCTTGCGATCGCAATCA ATCTCATCATTATCAATGCTCTCTATGTCCCCTGGATGCTCTTAGTGGGGGTTGAAAAAGAGACTCCTACCGTTGCTGCC ATCATTGTTTTGTCTATGACTGGAGTATTACTGATTTATACAGCTGTTGTCCAACAGATTTTCGCCCTCAAAATTCGCAA CCCTTATACCTGGACCATGGGAGGGCTTGGTCTCTGGATGTTGGTTCCACCGATTATGTTGTCTATTGTGAGCATCGTGC CTGATCAGGTTCCGGCCGCCATGATGATTTGGACCTTCTTAGGCTATCCCTTCAGCGATTTTGCGGAACCCATGGTCATT AGCAGTGCCCTAGTCGGTTTGGTTGCTCAGCTTTGCGTGATAGTGCTGTTGGTACGGCAGTTCCAAAATCACCTGCAGAA CCTTTCTCATGCTCAAGCGCGTCCGGTTGCTGGGTAA
Upstream 100 bases:
>100_bases CAATTTCCCAATTATCGATTTCCACCGTACTCAAGAGAGCCTAGAAGATATCTTTATTAAAATGGGCTATCGGCAAACCT CATAACTCTCTAGTCGCGTC
Downstream 100 bases:
>100_bases ACCTCAGAACATCACACTAAGCGCTATTGAGATGAACGCCAATGATCGAGTTCAGCATTAATAAAATATTGCACCAAGTT GCAATACAGCTGTTCGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MTSTFLNRVGNWNPQLLREFRGRLKSRSIAATIVVSLVGQTLLGLVFSQQTYKSVLERWAGLAEAMIWILPFALFTAGSY YLVSDLNQEEKRGTLNFIRLSPRPSRGVLLGKMLGVPILPYLAIGLAIPLHIMAGLNSGMPIFFLISYYLLLAAGCFALF SLAILYGLLSSSRTIAVGQQSVVAVAFAGLTLFFLAPLYMTWNMAVTWRPLGISEWSAQWNPYPYAGEDQNAPIQWFGQT INQSAFFSHWFTLSFLAIATALIWLMLVRLFRNPNTTVMSKWQSYAIVAFLEPLVLGFFVVTSDQANFAESTAEAGTWLL YAFNIGLTIVIMLALCPQRASLLDWVRFQKHPQGILRDLVWADKSPAILAIAINLIIINALYVPWMLLVGVEKETPTVAA IIVLSMTGVLLIYTAVVQQIFALKIRNPYTWTMGGLGLWMLVPPIMLSIVSIVPDQVPAAMMIWTFLGYPFSDFAEPMVI SSALVGLVAQLCVIVLLVRQFQNHLQNLSHAQARPVAG
Sequences:
>Translated_518_residues MTSTFLNRVGNWNPQLLREFRGRLKSRSIAATIVVSLVGQTLLGLVFSQQTYKSVLERWAGLAEAMIWILPFALFTAGSY YLVSDLNQEEKRGTLNFIRLSPRPSRGVLLGKMLGVPILPYLAIGLAIPLHIMAGLNSGMPIFFLISYYLLLAAGCFALF SLAILYGLLSSSRTIAVGQQSVVAVAFAGLTLFFLAPLYMTWNMAVTWRPLGISEWSAQWNPYPYAGEDQNAPIQWFGQT INQSAFFSHWFTLSFLAIATALIWLMLVRLFRNPNTTVMSKWQSYAIVAFLEPLVLGFFVVTSDQANFAESTAEAGTWLL YAFNIGLTIVIMLALCPQRASLLDWVRFQKHPQGILRDLVWADKSPAILAIAINLIIINALYVPWMLLVGVEKETPTVAA IIVLSMTGVLLIYTAVVQQIFALKIRNPYTWTMGGLGLWMLVPPIMLSIVSIVPDQVPAAMMIWTFLGYPFSDFAEPMVI SSALVGLVAQLCVIVLLVRQFQNHLQNLSHAQARPVAG >Mature_517_residues TSTFLNRVGNWNPQLLREFRGRLKSRSIAATIVVSLVGQTLLGLVFSQQTYKSVLERWAGLAEAMIWILPFALFTAGSYY LVSDLNQEEKRGTLNFIRLSPRPSRGVLLGKMLGVPILPYLAIGLAIPLHIMAGLNSGMPIFFLISYYLLLAAGCFALFS LAILYGLLSSSRTIAVGQQSVVAVAFAGLTLFFLAPLYMTWNMAVTWRPLGISEWSAQWNPYPYAGEDQNAPIQWFGQTI NQSAFFSHWFTLSFLAIATALIWLMLVRLFRNPNTTVMSKWQSYAIVAFLEPLVLGFFVVTSDQANFAESTAEAGTWLLY AFNIGLTIVIMLALCPQRASLLDWVRFQKHPQGILRDLVWADKSPAILAIAINLIIINALYVPWMLLVGVEKETPTVAAI IVLSMTGVLLIYTAVVQQIFALKIRNPYTWTMGGLGLWMLVPPIMLSIVSIVPDQVPAAMMIWTFLGYPFSDFAEPMVIS SALVGLVAQLCVIVLLVRQFQNHLQNLSHAQARPVAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57494; Mature: 57363
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTFLNRVGNWNPQLLREFRGRLKSRSIAATIVVSLVGQTLLGLVFSQQTYKSVLERWA CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLAEAMIWILPFALFTAGSYYLVSDLNQEEKRGTLNFIRLSPRPSRGVLLGKMLGVPILP HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCEEEEEECCCCCCCHHHHHHHCCCHHH YLAIGLAIPLHIMAGLNSGMPIFFLISYYLLLAAGCFALFSLAILYGLLSSSRTIAVGQQ HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCH SVVAVAFAGLTLFFLAPLYMTWNMAVTWRPLGISEWSAQWNPYPYAGEDQNAPIQWFGQT HHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHH INQSAFFSHWFTLSFLAIATALIWLMLVRLFRNPNTTVMSKWQSYAIVAFLEPLVLGFFV HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VTSDQANFAESTAEAGTWLLYAFNIGLTIVIMLALCPQRASLLDWVRFQKHPQGILRDLV EECCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHH WADKSPAILAIAINLIIINALYVPWMLLVGVEKETPTVAAIIVLSMTGVLLIYTAVVQQI HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FALKIRNPYTWTMGGLGLWMLVPPIMLSIVSIVPDQVPAAMMIWTFLGYPFSDFAEPMVI HHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHH SSALVGLVAQLCVIVLLVRQFQNHLQNLSHAQARPVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TSTFLNRVGNWNPQLLREFRGRLKSRSIAATIVVSLVGQTLLGLVFSQQTYKSVLERWA CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLAEAMIWILPFALFTAGSYYLVSDLNQEEKRGTLNFIRLSPRPSRGVLLGKMLGVPILP HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCEEEEEECCCCCCCHHHHHHHCCCHHH YLAIGLAIPLHIMAGLNSGMPIFFLISYYLLLAAGCFALFSLAILYGLLSSSRTIAVGQQ HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCH SVVAVAFAGLTLFFLAPLYMTWNMAVTWRPLGISEWSAQWNPYPYAGEDQNAPIQWFGQT HHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHH INQSAFFSHWFTLSFLAIATALIWLMLVRLFRNPNTTVMSKWQSYAIVAFLEPLVLGFFV HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VTSDQANFAESTAEAGTWLLYAFNIGLTIVIMLALCPQRASLLDWVRFQKHPQGILRDLV EECCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHH WADKSPAILAIAINLIIINALYVPWMLLVGVEKETPTVAAIIVLSMTGVLLIYTAVVQQI HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FALKIRNPYTWTMGGLGLWMLVPPIMLSIVSIVPDQVPAAMMIWTFLGYPFSDFAEPMVI HHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHH SSALVGLVAQLCVIVLLVRQFQNHLQNLSHAQARPVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA