Click here to switch to the map view.

The map label for this gene is 158335402

Identifier: 158335402

GI number: 158335402

Start: 2256301

End: 2256981

Strand: Direct

Name: 158335402

Synonym: AM1_2247

Alternate gene names: NA

Gene position: 2256301-2256981 (Clockwise)

Preceding gene: 158335401

Following gene: 158335403

Centisome position: 34.69

GC content: 54.92

Gene sequence:

>681_bases
ATGAAAATTCACGCAGATCTAACTGAACGGGCGGTGGTTCATAGCGACGACCTACCCTGGGTGGAGTCTCCCATGCCAGG
GGTTCACCGCCGCATGTTGGAACGGGATGGCAAAGAAGTCGCTCGGGCAACCTCCATCGTTCGCTATGCTCCTGGTAGTG
CCTTCTCTGCACACACCCACGGGGGTGGCGAAGAATATATTGTTCTGAACGGCGTGTTTTCTGACGAGCATGGCGATTTT
GGTCCAGGCACTTATGTCCGTAATCCGGTTGGGTCCAGCCACACCCCCTATAGCCAAGAAGGGGCCACCATTTTGGTCAA
GCTCTGGCAAATGGACCCAGCCGATCAGCAGCCGGTGGTGATTGATACGACTCAGGCAGAGTGGGTGCCGGGGTTAGTAC
CGGGGTTACAGGTGCTACCGCTGCATAATTACGGTACAGAACAGGTGGCCTTCGTGAAGTGGGCACCGGGGACAAAATTC
CAAACCCACCAACACTGGGGCGGCGAAGAGATCTTTGTCCTAGAAGGCACCTTTGCCGATGACCAGGGCGTTTATCCTCA
GGGGACTTGGCTACGCAATCCCCCCGGCAGCATCCATACCCCCTTTAGTGATGAAGGCTGTCTAATTTACGTGAAAACGG
GACATTTAGAGAACATCTACCACCCAGGAGAATCCTCATGA

Upstream 100 bases:

>100_bases
CTGGGCGACAGGCGCAATCTGGGATATTGATGGTGGCGTCATGGCCGGTCGAAACCAGTACAGCTAGCGTTGCAGACAGT
AAACCGAAGAGATAGACACT

Downstream 100 bases:

>100_bases
TTTCGGTTCAAGTTGCCTCCAATCATTCCCGGTATGGCCAAGATATTTCTATTCGCCATCTAAACCTGGCTGCGGATGAA
CCGCCTTCCCTAGGGGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Negative Regulator; Anti-Sigm Factor ChrR; Anti-Sigma Factor ChrR; Anti-Sigma Factor; Transcriptional Regulator; Anti-ECFsigma Factor Like; Transcription Negative Regulator ChrR; Transcriptional Activator Anti-ECFsigma Factor; Transcriptional Regulator Protein; Anti-ECF Sigma Factor ChrR

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKIHADLTERAVVHSDDLPWVESPMPGVHRRMLERDGKEVARATSIVRYAPGSAFSAHTHGGGEEYIVLNGVFSDEHGDF
GPGTYVRNPVGSSHTPYSQEGATILVKLWQMDPADQQPVVIDTTQAEWVPGLVPGLQVLPLHNYGTEQVAFVKWAPGTKF
QTHQHWGGEEIFVLEGTFADDQGVYPQGTWLRNPPGSIHTPFSDEGCLIYVKTGHLENIYHPGESS

Sequences:

>Translated_226_residues
MKIHADLTERAVVHSDDLPWVESPMPGVHRRMLERDGKEVARATSIVRYAPGSAFSAHTHGGGEEYIVLNGVFSDEHGDF
GPGTYVRNPVGSSHTPYSQEGATILVKLWQMDPADQQPVVIDTTQAEWVPGLVPGLQVLPLHNYGTEQVAFVKWAPGTKF
QTHQHWGGEEIFVLEGTFADDQGVYPQGTWLRNPPGSIHTPFSDEGCLIYVKTGHLENIYHPGESS
>Mature_226_residues
MKIHADLTERAVVHSDDLPWVESPMPGVHRRMLERDGKEVARATSIVRYAPGSAFSAHTHGGGEEYIVLNGVFSDEHGDF
GPGTYVRNPVGSSHTPYSQEGATILVKLWQMDPADQQPVVIDTTQAEWVPGLVPGLQVLPLHNYGTEQVAFVKWAPGTKF
QTHQHWGGEEIFVLEGTFADDQGVYPQGTWLRNPPGSIHTPFSDEGCLIYVKTGHLENIYHPGESS

Specific function: Unknown

COG id: COG3806

COG function: function code T; Anti-sigma factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24906; Mature: 24906

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHADLTERAVVHSDDLPWVESPMPGVHRRMLERDGKEVARATSIVRYAPGSAFSAHTH
CEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHEEECCCCCEEECCC
GGGEEYIVLNGVFSDEHGDFGPGTYVRNPVGSSHTPYSQEGATILVKLWQMDPADQQPVV
CCCCEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEE
IDTTQAEWVPGLVPGLQVLPLHNYGTEQVAFVKWAPGTKFQTHQHWGGEEIFVLEGTFAD
EECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCC
DQGVYPQGTWLRNPPGSIHTPFSDEGCLIYVKTGHLENIYHPGESS
CCCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKIHADLTERAVVHSDDLPWVESPMPGVHRRMLERDGKEVARATSIVRYAPGSAFSAHTH
CEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHEEECCCCCEEECCC
GGGEEYIVLNGVFSDEHGDFGPGTYVRNPVGSSHTPYSQEGATILVKLWQMDPADQQPVV
CCCCEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEE
IDTTQAEWVPGLVPGLQVLPLHNYGTEQVAFVKWAPGTKFQTHQHWGGEEIFVLEGTFAD
EECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCC
DQGVYPQGTWLRNPPGSIHTPFSDEGCLIYVKTGHLENIYHPGESS
CCCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA