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The map label for this gene is 158335400

Identifier: 158335400

GI number: 158335400

Start: 2254824

End: 2255411

Strand: Direct

Name: 158335400

Synonym: AM1_2245

Alternate gene names: NA

Gene position: 2254824-2255411 (Clockwise)

Preceding gene: 158335397

Following gene: 158335401

Centisome position: 34.67

GC content: 47.96

Gene sequence:

>588_bases
ATGGTAGATATTCAAAATATGGAAAAAAACACTGCCACTCAAATCCTGGATGTTGCTCAAGAGATGGTGCGAAACCGAGG
CTATAGTGCCTTTAGTTACGCCGATATCTCCAAGCAAGTCGGGATTCGCAAAGCTAGTATTCACTATCACTTTTCTACTA
AAGATGAGTTAGTGAAGGAACTGGTGAAGCGATATCGGGAGGACATGATGCGGGCCTGCGATCGCATCACCCAATCCAAC
GCCAGTCTTGATCAGCAGATAGTTCAATTTGCCCATCTTTATCGCAATGGTTTAGAAGACAAACAGATCTGTCTCTGTGC
CATGTTGGCTGCAGACTATGCCGTTCTTCCCCAACCGGTTCGCGACGAGATTCAAGTCTTCTTTCAGGAAACGGAAACCT
GGCTCACCAATCTCCTCCAACAGGGATGCGATGCCCAACTTTGGACCTGTCAGCCGGAGCAGGAAGCTAAAGGGTTAATT
GCCCTGCTCCAAGGTGCTCAGTTACTAGCTCGTTCAGCAACGGACAGCACTACCACCTTCGAGCAAATGGTTTATCCCCT
CTTAGCAGCCAAATTTCCCAGTCGCTAA

Upstream 100 bases:

>100_bases
ATGTAAATAAAGCGCAACATATATTGACATATTATTTTTTTCTTGCTAACCAGTTTTACCTGCGCGCCACAAAAAGAAAG
AGTTGACATCTACCTACTAG

Downstream 100 bases:

>100_bases
ATTTTTTTGCTTCACTATCTACCTACTAGTAGGTATTTGAATTAATTCACCAGTCTATCTATAGGAGTTCGTCATGTCTC
AAGCCTTTACAGGTCAAAAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Regulatory Protein Tetr; TetR-Family Transcriptional Regulator; Transcriptional Regulator Of TetR Family Protein; HTH-Type Protein SlmA; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVDIQNMEKNTATQILDVAQEMVRNRGYSAFSYADISKQVGIRKASIHYHFSTKDELVKELVKRYREDMMRACDRITQSN
ASLDQQIVQFAHLYRNGLEDKQICLCAMLAADYAVLPQPVRDEIQVFFQETETWLTNLLQQGCDAQLWTCQPEQEAKGLI
ALLQGAQLLARSATDSTTTFEQMVYPLLAAKFPSR

Sequences:

>Translated_195_residues
MVDIQNMEKNTATQILDVAQEMVRNRGYSAFSYADISKQVGIRKASIHYHFSTKDELVKELVKRYREDMMRACDRITQSN
ASLDQQIVQFAHLYRNGLEDKQICLCAMLAADYAVLPQPVRDEIQVFFQETETWLTNLLQQGCDAQLWTCQPEQEAKGLI
ALLQGAQLLARSATDSTTTFEQMVYPLLAAKFPSR
>Mature_195_residues
MVDIQNMEKNTATQILDVAQEMVRNRGYSAFSYADISKQVGIRKASIHYHFSTKDELVKELVKRYREDMMRACDRITQSN
ASLDQQIVQFAHLYRNGLEDKQICLCAMLAADYAVLPQPVRDEIQVFFQETETWLTNLLQQGCDAQLWTCQPEQEAKGLI
ALLQGAQLLARSATDSTTTFEQMVYPLLAAKFPSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22277; Mature: 22277

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDIQNMEKNTATQILDVAQEMVRNRGYSAFSYADISKQVGIRKASIHYHFSTKDELVKE
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHEEEEEECCHHHHHHH
LVKRYREDMMRACDRITQSNASLDQQIVQFAHLYRNGLEDKQICLCAMLAADYAVLPQPV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH
RDEIQVFFQETETWLTNLLQQGCDAQLWTCQPEQEAKGLIALLQGAQLLARSATDSTTTF
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EQMVYPLLAAKFPSR
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MVDIQNMEKNTATQILDVAQEMVRNRGYSAFSYADISKQVGIRKASIHYHFSTKDELVKE
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHEEEEEECCHHHHHHH
LVKRYREDMMRACDRITQSNASLDQQIVQFAHLYRNGLEDKQICLCAMLAADYAVLPQPV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH
RDEIQVFFQETETWLTNLLQQGCDAQLWTCQPEQEAKGLIALLQGAQLLARSATDSTTTF
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EQMVYPLLAAKFPSR
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA