| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158335398
Identifier: 158335398
GI number: 158335398
Start: 2253648
End: 2254310
Strand: Reverse
Name: 158335398
Synonym: AM1_2243
Alternate gene names: NA
Gene position: 2254310-2253648 (Counterclockwise)
Preceding gene: 158335399
Following gene: 158335394
Centisome position: 34.66
GC content: 46.91
Gene sequence:
>663_bases ATGCAAACTCAGCTACCTGTAACTGAAACGATCGACACAAAGCCTGCTGAGCAGCGCCTCATCTTGATGAATGTGTCTTG GGACACCTATGAACAATTACTGAATGCCTTTGGCGAACATCGAGCTGCGCGGTTGCACTATGACCTAGGTCTACTAGAAT TTATGGTTCCTTTAGAAGCCCATGAAAATCCCAGTGATGTGATTGGCGACTTTATCAAAGCACTAGTGATTGACAGCGGT CTCAATATTAAAAGCATGGCTTCAACCACCCTCCGCCGCCAATCCTTACAGAAAGGAGCCGAACCAGACAAATGCTATTA CATCCAAAATGAACCCCTCGTGCGAGGTAGAACTGTTGATTTAGAAAAAGATCCGCCCCCTGACTTAGTAGTAGAAGTCG ATATTACCCATGCAGATATCGATAAAAATAATCTCTACGCCAGTTTTGGTGTACCCGAGTTTTGGCGATTTAACGGCTCA GTATTGACCATCTACCAGCTTGAGCAGGATCAGTACCGAGAGGTTGATGCTAGTCCCACCTTCCCGTGGGTACCGAAAGA GGTTTTCTATCACTTTTTGCAACAGGGCAAAACGGCCGGTGAGGCCCAGGCCCTAAGAGAACTCAAAAGCTGGATCAAAC ATCATGCTGAGCCACCGGCTTAG
Upstream 100 bases:
>100_bases ACTCTCCTCTCGCTCATCTCTTATAGATGAGTGATTTTTTTTGCAACATAAATTTCACCGCTTATGCTGGAGGAGGTGAA GACTCAGGAGTCTAGAGATC
Downstream 100 bases:
>100_bases GGTCGCGATTTAAGACCGAAACCCAAATAATGGGATTGACTTGGCAGTCTCATGAGATATGCCTGCGAACACTTTCCTGA CTTAAACCCAAGGAATTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MQTQLPVTETIDTKPAEQRLILMNVSWDTYEQLLNAFGEHRAARLHYDLGLLEFMVPLEAHENPSDVIGDFIKALVIDSG LNIKSMASTTLRRQSLQKGAEPDKCYYIQNEPLVRGRTVDLEKDPPPDLVVEVDITHADIDKNNLYASFGVPEFWRFNGS VLTIYQLEQDQYREVDASPTFPWVPKEVFYHFLQQGKTAGEAQALRELKSWIKHHAEPPA
Sequences:
>Translated_220_residues MQTQLPVTETIDTKPAEQRLILMNVSWDTYEQLLNAFGEHRAARLHYDLGLLEFMVPLEAHENPSDVIGDFIKALVIDSG LNIKSMASTTLRRQSLQKGAEPDKCYYIQNEPLVRGRTVDLEKDPPPDLVVEVDITHADIDKNNLYASFGVPEFWRFNGS VLTIYQLEQDQYREVDASPTFPWVPKEVFYHFLQQGKTAGEAQALRELKSWIKHHAEPPA >Mature_220_residues MQTQLPVTETIDTKPAEQRLILMNVSWDTYEQLLNAFGEHRAARLHYDLGLLEFMVPLEAHENPSDVIGDFIKALVIDSG LNIKSMASTTLRRQSLQKGAEPDKCYYIQNEPLVRGRTVDLEKDPPPDLVVEVDITHADIDKNNLYASFGVPEFWRFNGS VLTIYQLEQDQYREVDASPTFPWVPKEVFYHFLQQGKTAGEAQALRELKSWIKHHAEPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25165; Mature: 25165
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTQLPVTETIDTKPAEQRLILMNVSWDTYEQLLNAFGEHRAARLHYDLGLLEFMVPLEA CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HENPSDVIGDFIKALVIDSGLNIKSMASTTLRRQSLQKGAEPDKCYYIQNEPLVRGRTVD CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEC LEKDPPPDLVVEVDITHADIDKNNLYASFGVPEFWRFNGSVLTIYQLEQDQYREVDASPT CCCCCCCCEEEEEEEEECCCCCCCEEEECCCCHHEECCCCEEEEEECCCHHHHCCCCCCC FPWVPKEVFYHFLQQGKTAGEAQALRELKSWIKHHAEPPA CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQTQLPVTETIDTKPAEQRLILMNVSWDTYEQLLNAFGEHRAARLHYDLGLLEFMVPLEA CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HENPSDVIGDFIKALVIDSGLNIKSMASTTLRRQSLQKGAEPDKCYYIQNEPLVRGRTVD CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEC LEKDPPPDLVVEVDITHADIDKNNLYASFGVPEFWRFNGSVLTIYQLEQDQYREVDASPT CCCCCCCCEEEEEEEEECCCCCCCEEEECCCCHHEECCCCEEEEEECCCHHHHCCCCCCC FPWVPKEVFYHFLQQGKTAGEAQALRELKSWIKHHAEPPA CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA