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The map label for this gene is narL [C]

Identifier: 158335395

GI number: 158335395

Start: 2250458

End: 2251867

Strand: Direct

Name: narL [C]

Synonym: AM1_2240

Alternate gene names: 158335395

Gene position: 2250458-2251867 (Clockwise)

Preceding gene: 158335393

Following gene: 158335396

Centisome position: 34.6

GC content: 49.43

Gene sequence:

>1410_bases
TTGCTAAATTCTGTTCAGTTACTCTCCGATCTTCAGGATGTCAATGCGATTGGTCAAAGTATTTCTGGGTGCTTAGAACC
AGCAGAAATTGCCCATCGTGTCACTGAAGCGTTGGTCCAGCGTTTTCAATGTGCCTTTGCTCGCATCTGGTTAACGGACA
CTGATCAGCAAGCTCTGACCTTAGTTGCCTCTTCTGGGCTGTATACCCATACCAATGGTTCTTTTGCCCATGTGCCCATG
GGTGCCTATAAGGTGGGCAAGATTGCCCAAAACCGAGTGCCGTTTTTAAGTAATTATTTACCGGATGAACCCTGGGTCAA
GGATCGAGACTGGGCAATTGCCAATCAAATTCAAGGGTTTGCCGGGTATCCGCTAATGGCGGGTGATCGGGTGTTAGGAG
TCCTGGCCACCTTTAGTCATACTCCCCTCGCTCCAGAATTCCTGGAAGTTCTGCAAATGCTGTGTCTGACGACAACTATT
GCCTTAGATGCCGCACTTCAGTCTCAGAGAACGATACCCAAATCTGTGTCTCAAAGTGGGGCAATAGCCCTTTCCGATCA
ACTGGCAAAGGTGCTCACCTCAACTCAGTTAATGTTGGTGGGCACGGAGCGGGATCTTCCGGCTTCTATGGCCTATGCCC
TGCTGCGCGGGGTGGAGCTGTTAACCCAACTGGATTGCAGCTATTGCCGCTTGACCTATGGTGAACAAGCCGTATTGTTG
GATGCAATCGCAATCTTCCCCCCTAACATCCGTGAAGATCTGTTAGAGCAAACTGCCTCTCCCTTAGCCGAGCTACAGCG
GCTGACTCTGTGGCTGGGAGGGACATTGACTACCCAACCGGACCCCCAAGATCGCGTGTTTGAGCTGACTTTAACGCTGC
CCTATGGGGCTGCAACTGAGCATTTCTCCGTGTCCGTCCACTGTCAACAGTCTGTCTTACAACTGGCATTTACCCATCTA
TGTTTGCAAGCAGGCTTAAATCTGAAAGAAATGACGTCTGCCAAAACAGCAGAATCAAATTGTCAAGAAGTCCTGCTGAC
AGATCGTCTGGATATCCCATCGTCTAAGTCACCTATCATTTGGATTCAGCATTCCCCTCGGGGGCAGATCCCTGCAGCAG
CTCAAGCGGTGGTGACACTGGATATTATTCCTCAGCAACTCTATACAGTTGTGGCTCAAGTTTCGCAAGGCCAAGCGGCT
TTGCCTGAGCTAATCGCTCCTACGTTATCCGACCGGGAACAGGAAATTATGCGGTTGTTATCTCAAGGGCTAAGAGATCG
CGATATTGCCAACCGATTACATATCAGCGAAAGTACCGTTCGGTTTCACGTCAACAATACTTTGACCAAGTTAAAGGCCA
AAAATCGGTATCAAGCGGTTTATGAGGCTACTAGTCGAGAGTGGATTTAG

Upstream 100 bases:

>100_bases
AGTCGCAAGTTGTACTGGTTGATACAAAGTGAGGGGAGTCTTTTTTATTCAATAAAGAAGTGATCCGTTCTCTTGAGCCA
TTCCAGCCCCAAGCCACACC

Downstream 100 bases:

>100_bases
GTGCTCAGTCGTGACTTTAGAACGAGACTGGGCAGACATTCAAAAATAGATATTCAGTGCAAGTATGAGAAGGCGACGCC
AGCTCCTGGGACATGATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: PAS Fold Family; Hydrogenase-4 Transcriptional Activator; Transcriptional Regulator LuxR Family Protein; GAF Domain/Histidine Kinase Domain-Containing Protein; Two Component Sensor Histidine Kinase; GAF Sensor Protein; Protein Kinase

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MLNSVQLLSDLQDVNAIGQSISGCLEPAEIAHRVTEALVQRFQCAFARIWLTDTDQQALTLVASSGLYTHTNGSFAHVPM
GAYKVGKIAQNRVPFLSNYLPDEPWVKDRDWAIANQIQGFAGYPLMAGDRVLGVLATFSHTPLAPEFLEVLQMLCLTTTI
ALDAALQSQRTIPKSVSQSGAIALSDQLAKVLTSTQLMLVGTERDLPASMAYALLRGVELLTQLDCSYCRLTYGEQAVLL
DAIAIFPPNIREDLLEQTASPLAELQRLTLWLGGTLTTQPDPQDRVFELTLTLPYGAATEHFSVSVHCQQSVLQLAFTHL
CLQAGLNLKEMTSAKTAESNCQEVLLTDRLDIPSSKSPIIWIQHSPRGQIPAAAQAVVTLDIIPQQLYTVVAQVSQGQAA
LPELIAPTLSDREQEIMRLLSQGLRDRDIANRLHISESTVRFHVNNTLTKLKAKNRYQAVYEATSREWI

Sequences:

>Translated_469_residues
MLNSVQLLSDLQDVNAIGQSISGCLEPAEIAHRVTEALVQRFQCAFARIWLTDTDQQALTLVASSGLYTHTNGSFAHVPM
GAYKVGKIAQNRVPFLSNYLPDEPWVKDRDWAIANQIQGFAGYPLMAGDRVLGVLATFSHTPLAPEFLEVLQMLCLTTTI
ALDAALQSQRTIPKSVSQSGAIALSDQLAKVLTSTQLMLVGTERDLPASMAYALLRGVELLTQLDCSYCRLTYGEQAVLL
DAIAIFPPNIREDLLEQTASPLAELQRLTLWLGGTLTTQPDPQDRVFELTLTLPYGAATEHFSVSVHCQQSVLQLAFTHL
CLQAGLNLKEMTSAKTAESNCQEVLLTDRLDIPSSKSPIIWIQHSPRGQIPAAAQAVVTLDIIPQQLYTVVAQVSQGQAA
LPELIAPTLSDREQEIMRLLSQGLRDRDIANRLHISESTVRFHVNNTLTKLKAKNRYQAVYEATSREWI
>Mature_469_residues
MLNSVQLLSDLQDVNAIGQSISGCLEPAEIAHRVTEALVQRFQCAFARIWLTDTDQQALTLVASSGLYTHTNGSFAHVPM
GAYKVGKIAQNRVPFLSNYLPDEPWVKDRDWAIANQIQGFAGYPLMAGDRVLGVLATFSHTPLAPEFLEVLQMLCLTTTI
ALDAALQSQRTIPKSVSQSGAIALSDQLAKVLTSTQLMLVGTERDLPASMAYALLRGVELLTQLDCSYCRLTYGEQAVLL
DAIAIFPPNIREDLLEQTASPLAELQRLTLWLGGTLTTQPDPQDRVFELTLTLPYGAATEHFSVSVHCQQSVLQLAFTHL
CLQAGLNLKEMTSAKTAESNCQEVLLTDRLDIPSSKSPIIWIQHSPRGQIPAAAQAVVTLDIIPQQLYTVVAQVSQGQAA
LPELIAPTLSDREQEIMRLLSQGLRDRDIANRLHISESTVRFHVNNTLTKLKAKNRYQAVYEATSREWI

Specific function: This Protein Activates The Expression Of The Nitrate Reductase (Narghji) And Formate Dehydrogenase-N (Fdnghi) Operons And Represses The Transcription Of The Fumarate Reductase (Frdabcd) Operon In Response To A Nitrate/Nitrite Induction Signal Transmitted

COG id: COG2203

COG function: function code T; FOG: GAF domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51612; Mature: 51612

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSVQLLSDLQDVNAIGQSISGCLEPAEIAHRVTEALVQRFQCAFARIWLTDTDQQALT
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH
LVASSGLYTHTNGSFAHVPMGAYKVGKIAQNRVPFLSNYLPDEPWVKDRDWAIANQIQGF
EEECCCEEEECCCCEEECCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHCCCC
AGYPLMAGDRVLGVLATFSHTPLAPEFLEVLQMLCLTTTIALDAALQSQRTIPKSVSQSG
CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
AIALSDQLAKVLTSTQLMLVGTERDLPASMAYALLRGVELLTQLDCSYCRLTYGEQAVLL
CEEHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHEECCCCHHHHH
DAIAIFPPNIREDLLEQTASPLAELQRLTLWLGGTLTTQPDPQDRVFELTLTLPYGAATE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEEECCCCCCCC
HFSVSVHCQQSVLQLAFTHLCLQAGLNLKEMTSAKTAESNCQEVLLTDRLDIPSSKSPII
CEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
WIQHSPRGQIPAAAQAVVTLDIIPQQLYTVVAQVSQGQAALPELIAPTLSDREQEIMRLL
EEEECCCCCCCCHHHHHHEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHH
SQGLRDRDIANRLHISESTVRFHVNNTLTKLKAKNRYQAVYEATSREWI
HCCCCHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLNSVQLLSDLQDVNAIGQSISGCLEPAEIAHRVTEALVQRFQCAFARIWLTDTDQQALT
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH
LVASSGLYTHTNGSFAHVPMGAYKVGKIAQNRVPFLSNYLPDEPWVKDRDWAIANQIQGF
EEECCCEEEECCCCEEECCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHCCCC
AGYPLMAGDRVLGVLATFSHTPLAPEFLEVLQMLCLTTTIALDAALQSQRTIPKSVSQSG
CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
AIALSDQLAKVLTSTQLMLVGTERDLPASMAYALLRGVELLTQLDCSYCRLTYGEQAVLL
CEEHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHEECCCCHHHHH
DAIAIFPPNIREDLLEQTASPLAELQRLTLWLGGTLTTQPDPQDRVFELTLTLPYGAATE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEEECCCCCCCC
HFSVSVHCQQSVLQLAFTHLCLQAGLNLKEMTSAKTAESNCQEVLLTDRLDIPSSKSPII
CEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
WIQHSPRGQIPAAAQAVVTLDIIPQQLYTVVAQVSQGQAALPELIAPTLSDREQEIMRLL
EEEECCCCCCCCHHHHHHEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHH
SQGLRDRDIANRLHISESTVRFHVNNTLTKLKAKNRYQAVYEATSREWI
HCCCCHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA