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The map label for this gene is yrbH [C]

Identifier: 158335348

GI number: 158335348

Start: 2196694

End: 2197698

Strand: Direct

Name: yrbH [C]

Synonym: AM1_2193

Alternate gene names: 158335348

Gene position: 2196694-2197698 (Clockwise)

Preceding gene: 158335347

Following gene: 158335349

Centisome position: 33.78

GC content: 54.93

Gene sequence:

>1005_bases
ATGCAATCTCTGATTCAAACGACCCAACCCACCTTTGCCTCTCAAGTGGATAAGCTCTTGCTTCTAGAGGCGGAAGCCAT
TGCGAAAGCGGCAGACCGATTGCAGCCTGAACAGGTCAATCAAGCCGTCGATCTCATGATCAACTGCTCAGGGAAGGTGG
TGTTGTCGGGGGTAGGCAAATCAGGGATTGTGGCTCGCAAAATCGCCGCGACCCTCACCAGTGTCGGTGTGATGGCGGTA
TTCTTACACCCTGTGGAAGCCCTCCATGGCGATTTAGGGATTGTGGCCACCACCGACGTGGTGGTGGTGTTGAGCAACAG
TGGTGAGACGGATGAGCTGATTGCCATGTTGCCCTGCTTAAAGCAGCGCCAAGTCCCCCTGATTGCCCTAGTGGGGAATG
TGAACTCGACCTTGGCGGATGAAGCGGATGTGGTCTTAGCAGCCACTGTGGACCAAGAAGCCTGCCCAATGAATTTAGCG
CCTACGGCCAGTACGACGGTTGCGATCGCAATCGGTGATGCCCTAGCCATGACCGTCACCCATGCCAAAGGCGTTACCCC
TGAAGCCTTTGCCGTTAATCACCCCGCAGGTCGCCTCGGCAAACGCTTAACCATTAAGGTCTCAGATTTGATGCACCAAG
GCTCCGAGCATCCTTGTATTTCCTCGGAAGCCAGCTGGTTAGAAATTGTCACCAGCATCAGCCAGGGCGGCTTAGGGGCT
GTGAACGTGGTGAATGCTCAACAGCAACTGCTGGGCATTGTCACCGACGGAGATCTGCGTCGTGCCATGGAGAAGATTCG
CCCCGTGGACCTGGAACAGATGAAGGCAGAAAAAATTATGACGGCGAATCCCATCACGGCTGCCCCCGACCAGTTAGCCT
ACGATGCCCTCCAGGTCATGGAAGATCGTCCGTCTCAAATTTCGGTCTTGCCCGTCGTCGATCCTGACGATCGTTGCGTG
GGAGTATTGAGACTGCACGATATTGCTCAAGCGGGTCTTATATGA

Upstream 100 bases:

>100_bases
ATGTTAATCAGTCTTCCTAGCTGCGGAAGACAGGGGTTTTGTACCCGCCATAAATAGCTCCATAAGATACGCTAGAACTA
CTGATGAGATATTGATTTCT

Downstream 100 bases:

>100_bases
ATATTCTTGCGGTCATCCCTGCCCGCTATCAATCTCAACGCTTTCCTGGCAAGCCCTTAGTGATGCTAGATGAGCGGCCC
ATGGTTCAGTGGGTGTATGA

Product: KpsF/GutQ family sugar isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQSLIQTTQPTFASQVDKLLLLEAEAIAKAADRLQPEQVNQAVDLMINCSGKVVLSGVGKSGIVARKIAATLTSVGVMAV
FLHPVEALHGDLGIVATTDVVVVLSNSGETDELIAMLPCLKQRQVPLIALVGNVNSTLADEADVVLAATVDQEACPMNLA
PTASTTVAIAIGDALAMTVTHAKGVTPEAFAVNHPAGRLGKRLTIKVSDLMHQGSEHPCISSEASWLEIVTSISQGGLGA
VNVVNAQQQLLGIVTDGDLRRAMEKIRPVDLEQMKAEKIMTANPITAAPDQLAYDALQVMEDRPSQISVLPVVDPDDRCV
GVLRLHDIAQAGLI

Sequences:

>Translated_334_residues
MQSLIQTTQPTFASQVDKLLLLEAEAIAKAADRLQPEQVNQAVDLMINCSGKVVLSGVGKSGIVARKIAATLTSVGVMAV
FLHPVEALHGDLGIVATTDVVVVLSNSGETDELIAMLPCLKQRQVPLIALVGNVNSTLADEADVVLAATVDQEACPMNLA
PTASTTVAIAIGDALAMTVTHAKGVTPEAFAVNHPAGRLGKRLTIKVSDLMHQGSEHPCISSEASWLEIVTSISQGGLGA
VNVVNAQQQLLGIVTDGDLRRAMEKIRPVDLEQMKAEKIMTANPITAAPDQLAYDALQVMEDRPSQISVLPVVDPDDRCV
GVLRLHDIAQAGLI
>Mature_334_residues
MQSLIQTTQPTFASQVDKLLLLEAEAIAKAADRLQPEQVNQAVDLMINCSGKVVLSGVGKSGIVARKIAATLTSVGVMAV
FLHPVEALHGDLGIVATTDVVVVLSNSGETDELIAMLPCLKQRQVPLIALVGNVNSTLADEADVVLAATVDQEACPMNLA
PTASTTVAIAIGDALAMTVTHAKGVTPEAFAVNHPAGRLGKRLTIKVSDLMHQGSEHPCISSEASWLEIVTSISQGGLGA
VNVVNAQQQLLGIVTDGDLRRAMEKIRPVDLEQMKAEKIMTANPITAAPDQLAYDALQVMEDRPSQISVLPVVDPDDRCV
GVLRLHDIAQAGLI

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=328, Percent_Identity=41.4634146341463, Blast_Score=247, Evalue=7e-67,
Organism=Escherichia coli, GI87082151, Length=319, Percent_Identity=41.692789968652, Blast_Score=231, Evalue=6e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 35115; Mature: 35115

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLIQTTQPTFASQVDKLLLLEAEAIAKAADRLQPEQVNQAVDLMINCSGKVVLSGVGK
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCEEEEEECCC
SGIVARKIAATLTSVGVMAVFLHPVEALHGDLGIVATTDVVVVLSNSGETDELIAMLPCL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEEEECCCCHHHHHHHHHHH
KQRQVPLIALVGNVNSTLADEADVVLAATVDQEACPMNLAPTASTTVAIAIGDALAMTVT
HHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEEEH
HAKGVTPEAFAVNHPAGRLGKRLTIKVSDLMHQGSEHPCISSEASWLEIVTSISQGGLGA
HCCCCCCCCEEECCCHHHHCCEEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCE
VNVVNAQQQLLGIVTDGDLRRAMEKIRPVDLEQMKAEKIMTANPITAAPDQLAYDALQVM
EEEECCHHHHEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
EDRPSQISVLPVVDPDDRCVGVLRLHDIAQAGLI
HCCCCCEEEEEEECCCCHHEEHHHHHHHHHHCCC
>Mature Secondary Structure
MQSLIQTTQPTFASQVDKLLLLEAEAIAKAADRLQPEQVNQAVDLMINCSGKVVLSGVGK
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCEEEEEECCC
SGIVARKIAATLTSVGVMAVFLHPVEALHGDLGIVATTDVVVVLSNSGETDELIAMLPCL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEEEECCCCHHHHHHHHHHH
KQRQVPLIALVGNVNSTLADEADVVLAATVDQEACPMNLAPTASTTVAIAIGDALAMTVT
HHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEEEH
HAKGVTPEAFAVNHPAGRLGKRLTIKVSDLMHQGSEHPCISSEASWLEIVTSISQGGLGA
HCCCCCCCCEEECCCHHHHCCEEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCE
VNVVNAQQQLLGIVTDGDLRRAMEKIRPVDLEQMKAEKIMTANPITAAPDQLAYDALQVM
EEEECCHHHHEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
EDRPSQISVLPVVDPDDRCVGVLRLHDIAQAGLI
HCCCCCEEEEEEECCCCHHEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]