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The map label for this gene is 158335327

Identifier: 158335327

GI number: 158335327

Start: 2172097

End: 2172540

Strand: Direct

Name: 158335327

Synonym: AM1_2171

Alternate gene names: NA

Gene position: 2172097-2172540 (Clockwise)

Preceding gene: 158335326

Following gene: 158335331

Centisome position: 33.4

GC content: 53.6

Gene sequence:

>444_bases
ATGAATACTTGTGTCTTAATGGCAGAGATTACCAAAGCCCCTCAACTGCGCTATACCCAGGATGGACAAACCGCCATCTC
CGAAATGTGGGTGCAGTTTCCCGCCCTGCGGTCTGGCGATCCCATGTCTACTATCAAAGTAACGGGCTGGGGAAATTTAG
CCCAACAAATTCAAGAACAATTTCAAGAAGGCGATCAGGTCATTATTGAAGGTCGCCTCGGCATGAATACCATCGACCGT
CCCGAAGGCTTTAAAGAAAAGCAAGCTGAGTTAACGGCGTCACGAATTCACACCACTGATATGTCCATCAGCGCGAGTGC
TGCCCCTGCGGCCGCACCCGCTCGTCCTGCCGCTCCAGCAGCGGCAACACCTGCAGCCATTCCTGCACCGCCGGCGCCAG
CTCCAGCAGAAGCAGAACCCAATTACGATGACATTCCCTTCTAG

Upstream 100 bases:

>100_bases
TCAAGGTCACAGCCCTGAGAACCCATTTGAGCTCAGCTTGCGACTCTGCTCGTAGAGGGCTGCAATCTCCCCCCGATAGA
AGATTTGAAGGACTAAAAAC

Downstream 100 bases:

>100_bases
TCGGCTTAATCCAAATTGATGTTAATGGTGCGCTGACCAATATCGTGGCGGTAATAGCAGCCCTCAAATTGAATGGACGG
TATCGCCTGATAAACCGTTT

Product: single-stranded DNA binding protein

Products: NA

Alternate protein names: Thylakoid-associated SSB [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNTCVLMAEITKAPQLRYTQDGQTAISEMWVQFPALRSGDPMSTIKVTGWGNLAQQIQEQFQEGDQVIIEGRLGMNTIDR
PEGFKEKQAELTASRIHTTDMSISASAAPAAAPARPAAPAAATPAAIPAPPAPAPAEAEPNYDDIPF

Sequences:

>Translated_147_residues
MNTCVLMAEITKAPQLRYTQDGQTAISEMWVQFPALRSGDPMSTIKVTGWGNLAQQIQEQFQEGDQVIIEGRLGMNTIDR
PEGFKEKQAELTASRIHTTDMSISASAAPAAAPARPAAPAAATPAAIPAPPAPAPAEAEPNYDDIPF
>Mature_147_residues
MNTCVLMAEITKAPQLRYTQDGQTAISEMWVQFPALRSGDPMSTIKVTGWGNLAQQIQEQFQEGDQVIIEGRLGMNTIDR
PEGFKEKQAELTASRIHTTDMSISASAAPAAAPARPAAPAAATPAAIPAPPAPAPAEAEPNYDDIPF

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 15646; Mature: 15646

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTCVLMAEITKAPQLRYTQDGQTAISEMWVQFPALRSGDPMSTIKVTGWGNLAQQIQEQ
CCCEEEEEECCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHH
FQEGDQVIIEGRLGMNTIDRPEGFKEKQAELTASRIHTTDMSISASAAPAAAPARPAAPA
HHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
AATPAAIPAPPAPAPAEAEPNYDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTCVLMAEITKAPQLRYTQDGQTAISEMWVQFPALRSGDPMSTIKVTGWGNLAQQIQEQ
CCCEEEEEECCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHH
FQEGDQVIIEGRLGMNTIDRPEGFKEKQAELTASRIHTTDMSISASAAPAAAPARPAAPA
HHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
AATPAAIPAPPAPAPAEAEPNYDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]