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The map label for this gene is ccb1

Identifier: 158335265

GI number: 158335265

Start: 2095869

End: 2096411

Strand: Reverse

Name: ccb1

Synonym: AM1_2108

Alternate gene names: NA

Gene position: 2096411-2095869 (Counterclockwise)

Preceding gene: 158335268

Following gene: 158335261

Centisome position: 32.23

GC content: 51.75

Gene sequence:

>543_bases
ATGCGCTCCTTTGTTTTACCCTCAACCTTTCTGCTGACCTTATTGCTGATGGTGGGGTTATTCTTCTTTGTTCGCGCCTC
GGTGAAGGATCGGACAGAAGAGTTGCAGTGGCTATCTAGCCAGCCAGAAGAAGCCGTGCTCAAGAAAGTGGAAGACCACC
TAACGAATCGGTCCTATCGGCTCTCGGCTTTAGACAAAGAATTGGATCAAGTCACCTTTGAAGGGACGGTACGGCCTAGC
GTGGTGTTGGCCTGTTTTCTAACCGCCCTGATGCTAACGGCAACCCTGTGCTTAAGCCTAGTATTTAGCATTCTCTTTCC
CTCCGTAGGCTTTGGCTTTACGGTGATCACCGTTATTTCACCGGTGGCAGGCTGGTTTTATTGGCAAAAGGCCCAACGGC
CTGAACAGGTTAGACTCAAGGTAGAATCGGTGGCCTCTTCTGGAGAGACAGACCCCCAAACCCTACTCACGGTGATTGCC
CACCGGGATGAAATCACGGCAATGCGCCCAACCCTAAAGACCTTCGGCGTCATTGCACCATAG

Upstream 100 bases:

>100_bases
TACCATATGGTTTCTTCCAAGTGCTTGCAGTGACTGAGGTCAACTCGATCTGGCAACTTGCATCACATTTGTTTTATTCA
CTGGGCTTAAATCACCTATG

Downstream 100 bases:

>100_bases
ATTTCGGTTATCCTCAGATATTTAGGGCATTGTCCCCAACTCAATCTAGTGGCGAGAGACCTGCTGATTGATGCGTGGGA
TATAGCTCTCGCTGGTGGGA

Product: cytochrome c biogenesis protein Ccb1

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRSFVLPSTFLLTLLLMVGLFFFVRASVKDRTEELQWLSSQPEEAVLKKVEDHLTNRSYRLSALDKELDQVTFEGTVRPS
VVLACFLTALMLTATLCLSLVFSILFPSVGFGFTVITVISPVAGWFYWQKAQRPEQVRLKVESVASSGETDPQTLLTVIA
HRDEITAMRPTLKTFGVIAP

Sequences:

>Translated_180_residues
MRSFVLPSTFLLTLLLMVGLFFFVRASVKDRTEELQWLSSQPEEAVLKKVEDHLTNRSYRLSALDKELDQVTFEGTVRPS
VVLACFLTALMLTATLCLSLVFSILFPSVGFGFTVITVISPVAGWFYWQKAQRPEQVRLKVESVASSGETDPQTLLTVIA
HRDEITAMRPTLKTFGVIAP
>Mature_180_residues
MRSFVLPSTFLLTLLLMVGLFFFVRASVKDRTEELQWLSSQPEEAVLKKVEDHLTNRSYRLSALDKELDQVTFEGTVRPS
VVLACFLTALMLTATLCLSLVFSILFPSVGFGFTVITVISPVAGWFYWQKAQRPEQVRLKVESVASSGETDPQTLLTVIA
HRDEITAMRPTLKTFGVIAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20158; Mature: 20158

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFVLPSTFLLTLLLMVGLFFFVRASVKDRTEELQWLSSQPEEAVLKKVEDHLTNRSYR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
LSALDKELDQVTFEGTVRPSVVLACFLTALMLTATLCLSLVFSILFPSVGFGFTVITVIS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PVAGWFYWQKAQRPEQVRLKVESVASSGETDPQTLLTVIAHRDEITAMRPTLKTFGVIAP
HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRSFVLPSTFLLTLLLMVGLFFFVRASVKDRTEELQWLSSQPEEAVLKKVEDHLTNRSYR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
LSALDKELDQVTFEGTVRPSVVLACFLTALMLTATLCLSLVFSILFPSVGFGFTVITVIS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PVAGWFYWQKAQRPEQVRLKVESVASSGETDPQTLLTVIAHRDEITAMRPTLKTFGVIAP
HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA