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The map label for this gene is thiO [H]

Identifier: 158335261

GI number: 158335261

Start: 2093726

End: 2094832

Strand: Reverse

Name: thiO [H]

Synonym: AM1_2104

Alternate gene names: 158335261

Gene position: 2094832-2093726 (Counterclockwise)

Preceding gene: 158335265

Following gene: 158335260

Centisome position: 32.21

GC content: 51.4

Gene sequence:

>1107_bases
ATGCAAATTGGCATTATTGGCTGTGGTGTTGTGGGAGCAGCAATTGCCTTTGAACTCAGTCAGACCCATCAGGTGACCGT
GTGGGATGCACGGTCTCCCCATCAATGGCAGGCGACAGGTGCGGCCCTGGGGGTGCTGATGGCAGCTATTACGCCGAAAT
TAAAGGGCAAACATCTACAGTTACGCTTAGATAGCTTAAAGCTGTACGAAACCCTAATACCTGAGCTGGAAGCGATCACC
CACATATCCTTGCCCTATAACCGTCAAGGCATTTTACGGCTGTGCTTTGATGGAGATGAGTTAAACCGTTGGTCTAGAAC
TCAGCAAGTTCGGGCTCAACAAGGCTTTCACCTAGATATCCTGGATCAGGACCAGCTATTTCAAACCTATCCCCATTTAA
AAACCGCTCATCTGTGGGAATCAAAAGCGCCAGCGGTGGGTGCCATCTATTCTCCGCAAGATCGCCAATTTGATCCTGTT
GCGTTATCGGCAGCCTTGATAACCGCTGCTCAGAAAAATGGGGCCGAGGTTTATTTCAATACAACTATCTCTGGCTTCAA
ACCCTTGCAAGCAGGTGATCCCCGGTCGCTAACGCATGTCTGCTCATCTACCGATAGCTATCCCGTGGATTGGGTGATTG
TGTCGGCAGGATTAGGATCAACACCTCTGACCACCACTCTCCAGCAGACCGTGCCGATTTATCCGGTTTTGGGACAAGCG
CTACATCTCCAACGCCAGTATCCCCTTGCAGACCTGTTGCCTGTCGTCAATGGTGATCAGGCGCATATAGTGCCCCTAAA
TGCCTCGGAGGTATGGGTGGGGGCGACGGTTGAATTTCCGTCTGAGGTGGGAGGCGCTATCGAAGCCGATCCAGTTCAAT
TAAAGGAGCTGCATCAACGTGTGATCGCACTCGATGCTTCCCTTGCCCATGCCAAAGTTCTCAGAACCTGGTCTGGCTTA
CGTCCTCGCCCCCATGAACGGCCTGCCCCGATCATTGAACGACTCCCGGGTTATGACAATGTGGTGGTGGCCAGTGGACA
TTATCGTAATGGTGTCTTATTAGCCCCCATTACGGCCCAAAAAGTGCGACAGTTGATATCGAACTAA

Upstream 100 bases:

>100_bases
TCATAATCCTAGCACATGCTTATGAATTTCTTGGACGGCAGATTATTGATTTTTCCTTAATAATCATGCTATTCATAAGT
TCCTCAATACAAAAATTGCA

Downstream 100 bases:

>100_bases
AGTGAGTTCTTGCGTATGCCCTTCCCCCGAGCTAGTGGCCTTCTCCTGCATCCGACGTCGTTTCCAGGTCGATTTGGAGT
TGGTGACCTAGGGCCAGAAG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: GO [H]

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MQIGIIGCGVVGAAIAFELSQTHQVTVWDARSPHQWQATGAALGVLMAAITPKLKGKHLQLRLDSLKLYETLIPELEAIT
HISLPYNRQGILRLCFDGDELNRWSRTQQVRAQQGFHLDILDQDQLFQTYPHLKTAHLWESKAPAVGAIYSPQDRQFDPV
ALSAALITAAQKNGAEVYFNTTISGFKPLQAGDPRSLTHVCSSTDSYPVDWVIVSAGLGSTPLTTTLQQTVPIYPVLGQA
LHLQRQYPLADLLPVVNGDQAHIVPLNASEVWVGATVEFPSEVGGAIEADPVQLKELHQRVIALDASLAHAKVLRTWSGL
RPRPHERPAPIIERLPGYDNVVVASGHYRNGVLLAPITAQKVRQLISN

Sequences:

>Translated_368_residues
MQIGIIGCGVVGAAIAFELSQTHQVTVWDARSPHQWQATGAALGVLMAAITPKLKGKHLQLRLDSLKLYETLIPELEAIT
HISLPYNRQGILRLCFDGDELNRWSRTQQVRAQQGFHLDILDQDQLFQTYPHLKTAHLWESKAPAVGAIYSPQDRQFDPV
ALSAALITAAQKNGAEVYFNTTISGFKPLQAGDPRSLTHVCSSTDSYPVDWVIVSAGLGSTPLTTTLQQTVPIYPVLGQA
LHLQRQYPLADLLPVVNGDQAHIVPLNASEVWVGATVEFPSEVGGAIEADPVQLKELHQRVIALDASLAHAKVLRTWSGL
RPRPHERPAPIIERLPGYDNVVVASGHYRNGVLLAPITAQKVRQLISN
>Mature_368_residues
MQIGIIGCGVVGAAIAFELSQTHQVTVWDARSPHQWQATGAALGVLMAAITPKLKGKHLQLRLDSLKLYETLIPELEAIT
HISLPYNRQGILRLCFDGDELNRWSRTQQVRAQQGFHLDILDQDQLFQTYPHLKTAHLWESKAPAVGAIYSPQDRQFDPV
ALSAALITAAQKNGAEVYFNTTISGFKPLQAGDPRSLTHVCSSTDSYPVDWVIVSAGLGSTPLTTTLQQTVPIYPVLGQA
LHLQRQYPLADLLPVVNGDQAHIVPLNASEVWVGATVEFPSEVGGAIEADPVQLKELHQRVIALDASLAHAKVLRTWSGL
RPRPHERPAPIIERLPGYDNVVVASGHYRNGVLLAPITAQKVRQLISN

Specific function: Catalyzes the FAD-dependent oxidative deamination of various amines and D-amino acids to yield the corresponding alpha- keto acids, ammonia/amine, and hydrogen peroxide. Oxidizes sarcosine (N-methylglycine), N-ethylglycine and glycine. Can also oxidize th

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DAO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR012727 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.3.19 [H]

Molecular weight: Translated: 40274; Mature: 40274

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIGIIGCGVVGAAIAFELSQTHQVTVWDARSPHQWQATGAALGVLMAAITPKLKGKHLQ
CEEEEEECHHHHHHHHEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
LRLDSLKLYETLIPELEAITHISLPYNRQGILRLCFDGDELNRWSRTQQVRAQQGFHLDI
EEEHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEE
LDQDQLFQTYPHLKTAHLWESKAPAVGAIYSPQDRQFDPVALSAALITAAQKNGAEVYFN
ECHHHHHHHCCCCEEHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEE
TTISGFKPLQAGDPRSLTHVCSSTDSYPVDWVIVSAGLGSTPLTTTLQQTVPIYPVLGQA
EECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHH
LHLQRQYPLADLLPVVNGDQAHIVPLNASEVWVGATVEFPSEVGGAIEADPVQLKELHQR
HHHHHCCCHHHHHHCCCCCCEEEEECCCCCEEEEEEEECHHHHCCCCCCCCHHHHHHHHH
VIALDASLAHAKVLRTWSGLRPRPHERPAPIIERLPGYDNVVVASGHYRNGVLLAPITAQ
HHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCEEEECCCHH
KVRQLISN
HHHHHHCC
>Mature Secondary Structure
MQIGIIGCGVVGAAIAFELSQTHQVTVWDARSPHQWQATGAALGVLMAAITPKLKGKHLQ
CEEEEEECHHHHHHHHEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
LRLDSLKLYETLIPELEAITHISLPYNRQGILRLCFDGDELNRWSRTQQVRAQQGFHLDI
EEEHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEE
LDQDQLFQTYPHLKTAHLWESKAPAVGAIYSPQDRQFDPVALSAALITAAQKNGAEVYFN
ECHHHHHHHCCCCEEHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEE
TTISGFKPLQAGDPRSLTHVCSSTDSYPVDWVIVSAGLGSTPLTTTLQQTVPIYPVLGQA
EECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHH
LHLQRQYPLADLLPVVNGDQAHIVPLNASEVWVGATVEFPSEVGGAIEADPVQLKELHQR
HHHHHCCCHHHHHHCCCCCCEEEEECCCCCEEEEEEEECHHHHCCCCCCCCHHHHHHHHH
VIALDASLAHAKVLRTWSGLRPRPHERPAPIIERLPGYDNVVVASGHYRNGVLLAPITAQ
HHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCEEEECCCHH
KVRQLISN
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9827558; 11744710 [H]