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The map label for this gene is ylbH [H]

Identifier: 158335208

GI number: 158335208

Start: 2044103

End: 2044648

Strand: Direct

Name: ylbH [H]

Synonym: AM1_2051

Alternate gene names: 158335208

Gene position: 2044103-2044648 (Clockwise)

Preceding gene: 158335207

Following gene: 158335213

Centisome position: 31.43

GC content: 52.75

Gene sequence:

>546_bases
ATGGTCAGAATTTACGGTAACCGTCAGATTAAAACCCTACCCGGCTTACAGACCCGCCCCACTACAGCCCGGGTACGGGA
AGCCCTATTTAATCGCTGGCAACATCATCTCCAGGGGTGCCATTGGCTCGATCTCTGTGCGGGCTTCGGCTCCATGGGAG
CCGAAGCCCTTTGTCGAGAAGCTGCAGTGGTCTATGGCATTGAACAAGCAGGTGAGGCTTGCCGGATTATCCGCCAGAAC
TGGCAGTCTGTGGCCCGTCCAGCCCAAACCTTTCAAGTCCTGCGGGGAGATGTCGTCAAACGGCTGGCTAAATTGCAAAG
TCAGTCTTTTGATCGGATTTACTTTGATCCCCCCTATGATGGCGGCTTATATGGAGCAGTACTGGATGCGATCTCAACTC
ACAATCTCCTCAAAGCCACAGGAGAACTCGCCGTCGAACATCGTCCCAAGCAGCAATTCCCCATTCCCACAACACTCCAA
ATCTGTCATACAAGCATCTATGGCAACACAGCCCTGACCTTTTTCCAGATCTCGCAACTGGCATAA

Upstream 100 bases:

>100_bases
TGGTGGTCAAAGGTAAAGAATCACTGACCCGTAAAGCCACTGATATTCTGCAAGGATATGACCCCGAAAATATCCAAGGC
TATATTGAACCGCCAGACTG

Downstream 100 bases:

>100_bases
ACAAAATCAGAGAGACGAACCCATCTCTCTGATTTACAGATAACAAATATTGTGGACAGCTCAAACAGAGCTGTTTCCTG
CGAGGTTTAACAAACTTTAG

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MVRIYGNRQIKTLPGLQTRPTTARVREALFNRWQHHLQGCHWLDLCAGFGSMGAEALCREAAVVYGIEQAGEACRIIRQN
WQSVARPAQTFQVLRGDVVKRLAKLQSQSFDRIYFDPPYDGGLYGAVLDAISTHNLLKATGELAVEHRPKQQFPIPTTLQ
ICHTSIYGNTALTFFQISQLA

Sequences:

>Translated_181_residues
MVRIYGNRQIKTLPGLQTRPTTARVREALFNRWQHHLQGCHWLDLCAGFGSMGAEALCREAAVVYGIEQAGEACRIIRQN
WQSVARPAQTFQVLRGDVVKRLAKLQSQSFDRIYFDPPYDGGLYGAVLDAISTHNLLKATGELAVEHRPKQQFPIPTTLQ
ICHTSIYGNTALTFFQISQLA
>Mature_181_residues
MVRIYGNRQIKTLPGLQTRPTTARVREALFNRWQHHLQGCHWLDLCAGFGSMGAEALCREAAVVYGIEQAGEACRIIRQN
WQSVARPAQTFQVLRGDVVKRLAKLQSQSFDRIYFDPPYDGGLYGAVLDAISTHNLLKATGELAVEHRPKQQFPIPTTLQ
ICHTSIYGNTALTFFQISQLA

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 20328; Mature: 20328

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRIYGNRQIKTLPGLQTRPTTARVREALFNRWQHHLQGCHWLDLCAGFGSMGAEALCRE
CEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHH
AAVVYGIEQAGEACRIIRQNWQSVARPAQTFQVLRGDVVKRLAKLQSQSFDRIYFDPPYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
GGLYGAVLDAISTHNLLKATGELAVEHRPKQQFPIPTTLQICHTSIYGNTALTFFQISQL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHC
A
C
>Mature Secondary Structure
MVRIYGNRQIKTLPGLQTRPTTARVREALFNRWQHHLQGCHWLDLCAGFGSMGAEALCRE
CEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHH
AAVVYGIEQAGEACRIIRQNWQSVARPAQTFQVLRGDVVKRLAKLQSQSFDRIYFDPPYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
GGLYGAVLDAISTHNLLKATGELAVEHRPKQQFPIPTTLQICHTSIYGNTALTFFQISQL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]