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The map label for this gene is rlpA [C]

Identifier: 158335109

GI number: 158335109

Start: 1945746

End: 1946081

Strand: Direct

Name: rlpA [C]

Synonym: AM1_1950

Alternate gene names: 158335109

Gene position: 1945746-1946081 (Clockwise)

Preceding gene: 158335108

Following gene: 158335112

Centisome position: 29.92

GC content: 47.92

Gene sequence:

>336_bases
ATGCTCAAAAAATTAATTGTTCCTTTGACCATCGCAGCATCCGTATTGTTTCAGTCTGCTGCCCTGGCTCAAACCGCAAC
TTACTACAGTGATTACTACCAAGGTCGCCAAACGGCATCTGGCGAAATTTTCGATACTTGGGGTAATACTGCAGCCCACC
CCAGCCTACCGTTTGGTACTTGGGTTCAGGTCACCAATTTGAATAATGGTGCTTCAGTCAATGTCCGTATCAACGATCGA
TGCAACTGCGGCATTGACCTTAGCAAAGCTGCTGCTGGACAGATTGGTCTGCTGCAAACCGGTGTTGCCCCTGTTTCCAT
CCAAGTTCTACGGTAA

Upstream 100 bases:

>100_bases
GAGTCTTGTTATAAAAGTCATCAATTGGGGAGATTTGACATAATTTGTAATAATTTGTTAGGGTAATTGATTGAAAGACC
CAGGCAAAGAGTAAGTAATT

Downstream 100 bases:

>100_bases
GTAGCTGTCGCCAACCATTGAGTTGGAATAGATCCATCAGAATTTGCTCTGAATTGAAATTTTGATATTTCCAGAAGCCT
CCTAATCGAGTTAGGAGGCT

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MLKKLIVPLTIAASVLFQSAALAQTATYYSDYYQGRQTASGEIFDTWGNTAAHPSLPFGTWVQVTNLNNGASVNVRINDR
CNCGIDLSKAAAGQIGLLQTGVAPVSIQVLR

Sequences:

>Translated_111_residues
MLKKLIVPLTIAASVLFQSAALAQTATYYSDYYQGRQTASGEIFDTWGNTAAHPSLPFGTWVQVTNLNNGASVNVRINDR
CNCGIDLSKAAAGQIGLLQTGVAPVSIQVLR
>Mature_111_residues
MLKKLIVPLTIAASVLFQSAALAQTATYYSDYYQGRQTASGEIFDTWGNTAAHPSLPFGTWVQVTNLNNGASVNVRINDR
CNCGIDLSKAAAGQIGLLQTGVAPVSIQVLR

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli rlpA [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001153
- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR000726 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 11815; Mature: 11815

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLIVPLTIAASVLFQSAALAQTATYYSDYYQGRQTASGEIFDTWGNTAAHPSLPFGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCC
WVQVTNLNNGASVNVRINDRCNCGIDLSKAAAGQIGLLQTGVAPVSIQVLR
EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEC
>Mature Secondary Structure
MLKKLIVPLTIAASVLFQSAALAQTATYYSDYYQGRQTASGEIFDTWGNTAAHPSLPFGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCC
WVQVTNLNNGASVNVRINDRCNCGIDLSKAAAGQIGLLQTGVAPVSIQVLR
EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]