| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is cinA [C]
Identifier: 158335100
GI number: 158335100
Start: 1934791
End: 1936050
Strand: Direct
Name: cinA [C]
Synonym: AM1_1941
Alternate gene names: 158335100
Gene position: 1934791-1936050 (Clockwise)
Preceding gene: 158335098
Following gene: 158335101
Centisome position: 29.75
GC content: 52.54
Gene sequence:
>1260_bases ATGAGCCGAAGTGCTGAGGTCATTTGCGTGGGGACAGAGCTTCTCCTTGGAGAAGTACTGAACTCAAATGCTCAGTTTTT GGGGCAGGAATTGGCTCGATTGGGTATCGCTCATTTTCATCAGACCGTGGTGGGAGATAACCCCACTCGCATCAAACGTG CGATCGCACTCGCCTGTCAACGGTCTCAACTCCTGATCTTTACAGGAGGGCTAGGTCCCACCCCCGATGACCTGACCACA GAAACATTGGCTGATTTCTTCCAAGCTCCACTGGTCAACCATCCCGAAATTTTGGAAGACATTGCCCGTAAGTTTGCCCA GCGCAACCGAGTGCCGAGTCCTTCCAATGACAAACAAGCTCTACTCCCTGACGGCGCTCAAATCCTTCCAAATCCCATCG GCAGTGCCCCAGGTATCATTTGGCATCCACGCCCCGAGCTAACCATTTTTACCTTTCCCGGTGTACCCAAAGAGTTTCAT CGGATGTGGCAGGAAACCGCCGTGCCCTATCTACAATCCACTGGCTGGGTAACCGCCCAAATTTATAGTCGAGTTCTGCG GTTTTGGGGGATTCCCGAATCCACTCTTGCGGACCAGGTTGCTCCCCTCTTGGCCTTAACCAATCCCACGGTTGCCCCCT ACGCCAGCAAAGGACAGGCTCGATTACGAATTTCCACCCGCGCCACCTCCCAAGAGACCGCCCATCAAGTTATTGCTCCC ATCGAACAACAAATTCGGCAGATTTGCGGACTGCACTGCTTTGGGGGCGATGATGAAACGTTGGAATCCGTGGTTGGCAA ACTCCTGCAACAAAGAGGAGAAACCTTAGCCGTAGCCGAATCCTGTACAGGCGGAGGTCTAGGACAACGAATCACGGGTG TATCGGGCAGTTCAACCTATTTTTTGGGAGGGGTGATTTCCTACACTAATGCCGCTAAACGAGATTTGCTGAAGGTTAAC GCAGCGGATCTCGAACAATACGGAGCCGTAAGTGCAATCGTGGCAGAACAGATGGCAGCAGGGGTGCGATCTCAACTCCA TAGCACCTGGGGCATTAGCATTACTGGCATTGCGGGACCAGACGGTGGCTCCGAAACGAAACCCGTAGGTCTGGTTTATA TCGGTTTGTCCGGGCCACAAGGAACTCAAAGCTTTGAATATCAGATTAGTCCGTTAAGAGGAAGGGACTGGATTCGACAA ATGAGTACGTCCCACGCCCTTGATCGCTTACGTCGCCAACTGCTGGCAGACGAATCATAA
Upstream 100 bases:
>100_bases CCTTAATTGACCCAATTGGCACCCAAACCGAGACAGCTCGCCCCATTTACGCTAGAAGTAACGATACAGTATTGAGGATA AGTCAACGAGATAAAAGGGT
Downstream 100 bases:
>100_bases AATTGCTAACGTATACATCCGGGCTTCCACGCAATTTGGTTACAGAGATCACACAATCAATCAGTAAATATGCTACGTTA AAGAAACGTTATAACATTTT
Product: competence damage-inducible protein CinA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSRSAEVICVGTELLLGEVLNSNAQFLGQELARLGIAHFHQTVVGDNPTRIKRAIALACQRSQLLIFTGGLGPTPDDLTT ETLADFFQAPLVNHPEILEDIARKFAQRNRVPSPSNDKQALLPDGAQILPNPIGSAPGIIWHPRPELTIFTFPGVPKEFH RMWQETAVPYLQSTGWVTAQIYSRVLRFWGIPESTLADQVAPLLALTNPTVAPYASKGQARLRISTRATSQETAHQVIAP IEQQIRQICGLHCFGGDDETLESVVGKLLQQRGETLAVAESCTGGGLGQRITGVSGSSTYFLGGVISYTNAAKRDLLKVN AADLEQYGAVSAIVAEQMAAGVRSQLHSTWGISITGIAGPDGGSETKPVGLVYIGLSGPQGTQSFEYQISPLRGRDWIRQ MSTSHALDRLRRQLLADES
Sequences:
>Translated_419_residues MSRSAEVICVGTELLLGEVLNSNAQFLGQELARLGIAHFHQTVVGDNPTRIKRAIALACQRSQLLIFTGGLGPTPDDLTT ETLADFFQAPLVNHPEILEDIARKFAQRNRVPSPSNDKQALLPDGAQILPNPIGSAPGIIWHPRPELTIFTFPGVPKEFH RMWQETAVPYLQSTGWVTAQIYSRVLRFWGIPESTLADQVAPLLALTNPTVAPYASKGQARLRISTRATSQETAHQVIAP IEQQIRQICGLHCFGGDDETLESVVGKLLQQRGETLAVAESCTGGGLGQRITGVSGSSTYFLGGVISYTNAAKRDLLKVN AADLEQYGAVSAIVAEQMAAGVRSQLHSTWGISITGIAGPDGGSETKPVGLVYIGLSGPQGTQSFEYQISPLRGRDWIRQ MSTSHALDRLRRQLLADES >Mature_418_residues SRSAEVICVGTELLLGEVLNSNAQFLGQELARLGIAHFHQTVVGDNPTRIKRAIALACQRSQLLIFTGGLGPTPDDLTTE TLADFFQAPLVNHPEILEDIARKFAQRNRVPSPSNDKQALLPDGAQILPNPIGSAPGIIWHPRPELTIFTFPGVPKEFHR MWQETAVPYLQSTGWVTAQIYSRVLRFWGIPESTLADQVAPLLALTNPTVAPYASKGQARLRISTRATSQETAHQVIAPI EQQIRQICGLHCFGGDDETLESVVGKLLQQRGETLAVAESCTGGGLGQRITGVSGSSTYFLGGVISYTNAAKRDLLKVNA ADLEQYGAVSAIVAEQMAAGVRSQLHSTWGISITGIAGPDGGSETKPVGLVYIGLSGPQGTQSFEYQISPLRGRDWIRQM STSHALDRLRRQLLADES
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family
Homologues:
Organism=Escherichia coli, GI1788583, Length=287, Percent_Identity=29.9651567944251, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1789052, Length=155, Percent_Identity=40.6451612903226, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1787818, Length=121, Percent_Identity=34.7107438016529, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323832, Length=166, Percent_Identity=26.5060240963855, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CINAL_ACAM1 (B0CEJ2)
Other databases:
- EMBL: CP000828 - RefSeq: YP_001516272.1 - ProteinModelPortal: B0CEJ2 - SMR: B0CEJ2 - GeneID: 5680756 - GenomeReviews: CP000828_GR - KEGG: amr:AM1_1941 - HOGENOM: HBG449871 - OMA: NPTVAPY - BioCyc: AMAR329726:AM1_1941-MONOMER - HAMAP: MF_00226_B - InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 - Gene3D: G3DSA:3.40.980.10 - PIRSF: PIRSF006728 - SMART: SM00852 - TIGRFAMs: TIGR00199 - TIGRFAMs: TIGR00200
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth
EC number: NA
Molecular weight: Translated: 45264; Mature: 45133
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSAEVICVGTELLLGEVLNSNAQFLGQELARLGIAHFHQTVVGDNPTRIKRAIALACQ CCCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC RSQLLIFTGGLGPTPDDLTTETLADFFQAPLVNHPEILEDIARKFAQRNRVPSPSNDKQA CCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE LLPDGAQILPNPIGSAPGIIWHPRPELTIFTFPGVPKEFHRMWQETAVPYLQSTGWVTAQ ECCCCHHHCCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHCCCHHHCCCCCHHH IYSRVLRFWGIPESTLADQVAPLLALTNPTVAPYASKGQARLRISTRATSQETAHQVIAP HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH IEQQIRQICGLHCFGGDDETLESVVGKLLQQRGETLAVAESCTGGGLGQRITGVSGSSTY HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCCCCCE FLGGVISYTNAAKRDLLKVNAADLEQYGAVSAIVAEQMAAGVRSQLHSTWGISITGIAGP EECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC DGGSETKPVGLVYIGLSGPQGTQSFEYQISPLRGRDWIRQMSTSHALDRLRRQLLADES CCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRSAEVICVGTELLLGEVLNSNAQFLGQELARLGIAHFHQTVVGDNPTRIKRAIALACQ CCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC RSQLLIFTGGLGPTPDDLTTETLADFFQAPLVNHPEILEDIARKFAQRNRVPSPSNDKQA CCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE LLPDGAQILPNPIGSAPGIIWHPRPELTIFTFPGVPKEFHRMWQETAVPYLQSTGWVTAQ ECCCCHHHCCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHCCCHHHCCCCCHHH IYSRVLRFWGIPESTLADQVAPLLALTNPTVAPYASKGQARLRISTRATSQETAHQVIAP HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH IEQQIRQICGLHCFGGDDETLESVVGKLLQQRGETLAVAESCTGGGLGQRITGVSGSSTY HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCCCCCE FLGGVISYTNAAKRDLLKVNAADLEQYGAVSAIVAEQMAAGVRSQLHSTWGISITGIAGP EECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC DGGSETKPVGLVYIGLSGPQGTQSFEYQISPLRGRDWIRQMSTSHALDRLRRQLLADES CCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA