Click here to switch to the map view.

The map label for this gene is lpsE [H]

Identifier: 158335056

GI number: 158335056

Start: 1891050

End: 1892201

Strand: Reverse

Name: lpsE [H]

Synonym: AM1_1894

Alternate gene names: 158335056

Gene position: 1892201-1891050 (Counterclockwise)

Preceding gene: 158335057

Following gene: 158335055

Centisome position: 29.09

GC content: 50.69

Gene sequence:

>1152_bases
ATGAAACAGCACCGTATTTTATTTATTAATCATGTTGGCGCGCTAGCAGGGGCAGAATATTGCTGTTTGAGTATTGCTGC
TGCCTATCGGGCAACGAGCCAGATGTTGCTATTTGAAGATGGACCGTTTCGTCAGGCTCTAGAAAAAGCCGGGGTCCCGG
TTACTGTTGTCAATGCACCAGACTCGCTGTTGTCTATTCGGACATCCAGTGGCTTGGCTTCCCTTAAAGCGATTCCAGCG
CTGTGGCAAATGGCGCAGCAGATTGCTAAAGCCTCTCAAGGATTTGATTTTATTTGTGCCAATTCTCAAAAAGCGTTTAT
TGCGGCTAGCTTGGCGACACTGATCGGGACGCCGCCGCTAGTTTGGCATTTACGAGATATCCTGACTGCTAAGCATTTTA
GTGGTGTGAATCGTCGTGTCGCCATTACTCTGGCGAATAACCGGGCCGCTCAAGTTTGGGTTGCATCACAGGCAACGGCT
GATGCCTTTATCGCTGTGGGTGGTCGTCCTAATTTGGTGAAAGTGATGTATGACGGGATTGAGTCGGATCGGTTTGATCA
GGTCACCCTGGAAGCTGCAACAGCTGTGCGCCAAGAACTCAAGCTAGAGAATGTACCCTTGGTGGGACTGTTTAGCCGCC
TCTCTCCATGGAAAGGCCAACATGTCTTAATTGAAGCGTTGCGGTCTTTACCGGATGTCCATGGGTTATTGGTGGGCGAT
GCTTTGTTTGGAGAACAAGACTATGTCGCCATGATCAAAGAAATGGCGGCTGGCGAAGATTTAGCCGATCGAATTCATTG
GTTGGGATTTCGCCAAGACGTCCCGGCTTTGATGAAAGCTTGCGATATTGTCATTCATGCCTCTACTGAACCTGAACCTT
GTGCCAGAATTGCGATTGAAGGTCAGCTAGCCCAAAAGCCGGTGATTGCGACGGCGGCAGGGGGCATGTTGGAAGTGATT
GCCGATCGGCAGTCGGGGCGGTTAGTCCCCCCAGGGGATGCGAATGCTTTAGCCGCCGCGATTCATGAGTTGTTGAATGA
TCAACAGCTTGCCTCGACCTTAGCTGAACAGGGTATGCAGTCTGCTGCCACTAAGTTTGCCCCTGAGGTGTGCCTTGGTG
CCGTTGACCAGGCCTTAGCAACTCTAGTTTAA

Upstream 100 bases:

>100_bases
GATTCACTCGGCATTGGGAGGATGAAGGCGTCATCATCTTTTTTAAGAAAGTTAGTCAACCGATTCTTTAAAGCCCATTA
CTTTAAGATCCAAATAGCAT

Downstream 100 bases:

>100_bases
AGGGAGGTTGATAAAATAATTTTTTAGAATAAAATAATTTCAGAGCGTTGAGTATGGTGAAGATACTGCGCGTAATATAA
ACTCTGCTCCTGATCTCAAC

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKQHRILFINHVGALAGAEYCCLSIAAAYRATSQMLLFEDGPFRQALEKAGVPVTVVNAPDSLLSIRTSSGLASLKAIPA
LWQMAQQIAKASQGFDFICANSQKAFIAASLATLIGTPPLVWHLRDILTAKHFSGVNRRVAITLANNRAAQVWVASQATA
DAFIAVGGRPNLVKVMYDGIESDRFDQVTLEAATAVRQELKLENVPLVGLFSRLSPWKGQHVLIEALRSLPDVHGLLVGD
ALFGEQDYVAMIKEMAAGEDLADRIHWLGFRQDVPALMKACDIVIHASTEPEPCARIAIEGQLAQKPVIATAAGGMLEVI
ADRQSGRLVPPGDANALAAAIHELLNDQQLASTLAEQGMQSAATKFAPEVCLGAVDQALATLV

Sequences:

>Translated_383_residues
MKQHRILFINHVGALAGAEYCCLSIAAAYRATSQMLLFEDGPFRQALEKAGVPVTVVNAPDSLLSIRTSSGLASLKAIPA
LWQMAQQIAKASQGFDFICANSQKAFIAASLATLIGTPPLVWHLRDILTAKHFSGVNRRVAITLANNRAAQVWVASQATA
DAFIAVGGRPNLVKVMYDGIESDRFDQVTLEAATAVRQELKLENVPLVGLFSRLSPWKGQHVLIEALRSLPDVHGLLVGD
ALFGEQDYVAMIKEMAAGEDLADRIHWLGFRQDVPALMKACDIVIHASTEPEPCARIAIEGQLAQKPVIATAAGGMLEVI
ADRQSGRLVPPGDANALAAAIHELLNDQQLASTLAEQGMQSAATKFAPEVCLGAVDQALATLV
>Mature_383_residues
MKQHRILFINHVGALAGAEYCCLSIAAAYRATSQMLLFEDGPFRQALEKAGVPVTVVNAPDSLLSIRTSSGLASLKAIPA
LWQMAQQIAKASQGFDFICANSQKAFIAASLATLIGTPPLVWHLRDILTAKHFSGVNRRVAITLANNRAAQVWVASQATA
DAFIAVGGRPNLVKVMYDGIESDRFDQVTLEAATAVRQELKLENVPLVGLFSRLSPWKGQHVLIEALRSLPDVHGLLVGD
ALFGEQDYVAMIKEMAAGEDLADRIHWLGFRQDVPALMKACDIVIHASTEPEPCARIAIEGQLAQKPVIATAAGGMLEVI
ADRQSGRLVPPGDANALAAAIHELLNDQQLASTLAEQGMQSAATKFAPEVCLGAVDQALATLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40896; Mature: 40896

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQHRILFINHVGALAGAEYCCLSIAAAYRATSQMLLFEDGPFRQALEKAGVPVTVVNAP
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCEEEECCC
DSLLSIRTSSGLASLKAIPALWQMAQQIAKASQGFDFICANSQKAFIAASLATLIGTPPL
CHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCHH
VWHLRDILTAKHFSGVNRRVAITLANNRAAQVWVASQATADAFIAVGGRPNLVKVMYDGI
HHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCEEEEECCCCCEEHEECCCC
ESDRFDQVTLEAATAVRQELKLENVPLVGLFSRLSPWKGQHVLIEALRSLPDVHGLLVGD
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHEEHH
ALFGEQDYVAMIKEMAAGEDLADRIHWLGFRQDVPALMKACDIVIHASTEPEPCARIAIE
HHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCEEEEECCCCCCCHHEEEEC
GQLAQKPVIATAAGGMLEVIADRQSGRLVPPGDANALAAAIHELLNDQQLASTLAEQGMQ
CCCCCCCEEEECCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH
SAATKFAPEVCLGAVDQALATLV
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQHRILFINHVGALAGAEYCCLSIAAAYRATSQMLLFEDGPFRQALEKAGVPVTVVNAP
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCEEEECCC
DSLLSIRTSSGLASLKAIPALWQMAQQIAKASQGFDFICANSQKAFIAASLATLIGTPPL
CHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCHH
VWHLRDILTAKHFSGVNRRVAITLANNRAAQVWVASQATADAFIAVGGRPNLVKVMYDGI
HHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCEEEEECCCCCEEHEECCCC
ESDRFDQVTLEAATAVRQELKLENVPLVGLFSRLSPWKGQHVLIEALRSLPDVHGLLVGD
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHEEHH
ALFGEQDYVAMIKEMAAGEDLADRIHWLGFRQDVPALMKACDIVIHASTEPEPCARIAIE
HHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCEEEEECCCCCCCHHEEEEC
GQLAQKPVIATAAGGMLEVIADRQSGRLVPPGDANALAAAIHELLNDQQLASTLAEQGMQ
CCCCCCCEEEECCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH
SAATKFAPEVCLGAVDQALATLV
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]