Click here to switch to the map view.

The map label for this gene is 158335052

Identifier: 158335052

GI number: 158335052

Start: 1885280

End: 1887607

Strand: Direct

Name: 158335052

Synonym: AM1_1890

Alternate gene names: NA

Gene position: 1885280-1887607 (Clockwise)

Preceding gene: 158335048

Following gene: 158335053

Centisome position: 28.99

GC content: 52.84

Gene sequence:

>2328_bases
ATGGGGAGTATATCGGCACAGTTCAATCCCAAACAGCTGGAAGTACCCGATGGCTTTGGGGTGGCCATTCATTTCACCGA
CCCCAAACCGGGCGAGATGGATCTGCTAGAGGCTTCAGGGGTTCGTTGGATACGAGCCGATCTGGTGTGGTTACGGACAG
AAGTCAAAAAAGGTCAGTACGACTTTTCAGCCTACGATCGACTGCTGGATCAATTAGAGCGCCATAATCTCCGGGCCATT
TTTATCCTCGACTATGGCAACCCCTTATATGATGGCGGTTTTTCCCCACACACCGATGCTGGGCGTCAGGCGTTTGCTCG
CTGGGCTGTGGCTGCCGTCAAGCATTTCCAAGGACGCGGAGTCGTCTGGGAAATGTACAACGAGCCCAACATTTTGCCCT
TTTGGAGTCCTCGCCCCAATGTCCAGGACTATATCAAGCTGGCCAAAACTGTTGGTAAAGCAATTCACCGGGTCTATCCT
CAAGAAGTGATTATTGGCCCCGCTCTTGCGGGTAGTGTGAATAAGCCCGGTCGCCAGGAATTTTTGGAAGCCTGTTTTCA
GGCTGGCTTATTGGAAGACTGGTCTGCTGTTTCCATTCACCCCTACCGAATCACACGACCTGAAACCGTAACTCGCGACT
ATCGCCAATTGCGGCTGTTGATCGCCAAATATGCACCGCCTGGCAAGAAAATTCCCATTATTGCCGGGGAATGGGGCTAT
CCATCATCGACGGCTTGGCGGCAGGGCAAAGTCATTGATCCGACGACCCAGGCTAAATATTTAGGGCGGCAATGGTTAAA
CAATCTGGCCAATGAGATTCCCTTATCCATTTGGTATGACTGGCAAAATAACGGTCCGAAGGCAGAGGATCCAGAGCATA
ATTATGGCCTGATTGGCTATGCTGACCCCAAGCAGAATCGACCGACCTACGAGGTTAAACCCGCCTATCGGGCTGCCCAA
GCCCTCAATCAATCCCTAAAAGGCTTTCAGTTCAATAAACGACTCGATGTTGGGCGTGCGGATGATTATGTTTTGCTCTT
TAACCAGGGCAATCAGGTCAAAATTGCGGCCTGGACAACCGCACAATCACCCCACACAACCGTTATCCCCACCAGTCCTG
GATCGTTTCGTGCCCTGGATTATCTCGGCCAAAATCCCAAAACCCTGAAAGCGACGACTCAAGGACTGTCTTTATCTCTC
ACAGATGCTCCTCAATATCTAACCCCTACCCAGCCCAACGCCCTCCTGCAACTGGCCGCCGCCTGGGAAACGCTGCCGCT
GGAGCAGGTCGTACCGGGCTCTCAAACCATTGACGTGCCTCTACGCCTCAGAAATCCCCTCTCAACTCCCATTCAAGTGA
ATACGGGTACCCAAATCGCGACCATTCCCCCTAGACAAACCCAATCCCTGGTAACCACGGTAACCCCTTCGCGTCAGGGC
AAAGCACAGCCTCTGCGCTTAGAGTGGCAGGTTCGAGGCCTTGGTGTCTTGACGCAACGGACGGATCTGCTGCTCACCAA
TCCTTTGACCGCGACCATTTTGCCCATGGGGGCTAACCAGTTAACCGTCGTTCTTCAGAACCCTGCCGGAACGGCTCTGA
AAGGGAGAGCAACCCTGACGAATCTCCAAGGGTTAGGGGTCACAACCCGAAGCCAACCCATTCAGTTTGCCTCCGGGGAA
ACCCAGAAATATCTCAAGTTCAAAGCCCGACGCACGCAAAGTACCTATCAGGCCGGGTTAGAGGTGACAGAAGGGGGGAC
CCTGCATACCTTTCCACCTCAGCAGTTCAAGACTGTGATTAATTTTGCCGATCTAAACGCAAAGACGGTGGGTCAGGCGC
TGCAAACTATTCCTGGGGGGGATGCGAAGGTGCGATCGCAACAGTCCCTAACCGTGATACCGTCCGCCTCTCGCTATGCA
ACCACTGTGGGCCGCAACGTGCTCAAAATCACCTATCAATTCCAAGCCGGGTGGAAATATCTACACCTACTCCCCACCCG
GCAGTACCAATCTCGATTAAGCATTCAAGGCCGCCCCCAATCTCTGGGACTTTGGATTCACGGAGATGGGAGTGGGAATC
AAATTTCTTTACGGTACCAAGATAAAACTGGGCAAATCTTCCAGCCCAAGAGTCAGGTCATCACCTGGAAAGGATGGCGG
TACATTACCTTTGCCTTAGATGGCCAGGATGCCACGGTATGGGGAGGGGCAGCCGATGGGATTGTTCACTATCCCATGCA
GCTCAATTCCCTGCTCGCCATCGATAATGCCAAGAAACAGGTTACCTCAGGGGAAATTTATGTCGGCCAGCCCACTTTGG
TATGGTGA

Upstream 100 bases:

>100_bases
CAGGCAGCTAGCTAAATACCCATTTTTGATCCAACGCCGATGGTGGAGACGAGGGTGCATTAGTTTTTGCCTAGGCCTTT
TCCTCTGGGTGTCCTGCTCG

Downstream 100 bases:

>100_bases
ACCATCGACATACATAAGCACGAAGGTCTTGGATAGGTATGCCCCAAGCAGCCGGACATCCCCCGCAACAACGGATCGAA
TGGATTGATTATGCCAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 775; Mature: 774

Protein sequence:

>775_residues
MGSISAQFNPKQLEVPDGFGVAIHFTDPKPGEMDLLEASGVRWIRADLVWLRTEVKKGQYDFSAYDRLLDQLERHNLRAI
FILDYGNPLYDGGFSPHTDAGRQAFARWAVAAVKHFQGRGVVWEMYNEPNILPFWSPRPNVQDYIKLAKTVGKAIHRVYP
QEVIIGPALAGSVNKPGRQEFLEACFQAGLLEDWSAVSIHPYRITRPETVTRDYRQLRLLIAKYAPPGKKIPIIAGEWGY
PSSTAWRQGKVIDPTTQAKYLGRQWLNNLANEIPLSIWYDWQNNGPKAEDPEHNYGLIGYADPKQNRPTYEVKPAYRAAQ
ALNQSLKGFQFNKRLDVGRADDYVLLFNQGNQVKIAAWTTAQSPHTTVIPTSPGSFRALDYLGQNPKTLKATTQGLSLSL
TDAPQYLTPTQPNALLQLAAAWETLPLEQVVPGSQTIDVPLRLRNPLSTPIQVNTGTQIATIPPRQTQSLVTTVTPSRQG
KAQPLRLEWQVRGLGVLTQRTDLLLTNPLTATILPMGANQLTVVLQNPAGTALKGRATLTNLQGLGVTTRSQPIQFASGE
TQKYLKFKARRTQSTYQAGLEVTEGGTLHTFPPQQFKTVINFADLNAKTVGQALQTIPGGDAKVRSQQSLTVIPSASRYA
TTVGRNVLKITYQFQAGWKYLHLLPTRQYQSRLSIQGRPQSLGLWIHGDGSGNQISLRYQDKTGQIFQPKSQVITWKGWR
YITFALDGQDATVWGGAADGIVHYPMQLNSLLAIDNAKKQVTSGEIYVGQPTLVW

Sequences:

>Translated_775_residues
MGSISAQFNPKQLEVPDGFGVAIHFTDPKPGEMDLLEASGVRWIRADLVWLRTEVKKGQYDFSAYDRLLDQLERHNLRAI
FILDYGNPLYDGGFSPHTDAGRQAFARWAVAAVKHFQGRGVVWEMYNEPNILPFWSPRPNVQDYIKLAKTVGKAIHRVYP
QEVIIGPALAGSVNKPGRQEFLEACFQAGLLEDWSAVSIHPYRITRPETVTRDYRQLRLLIAKYAPPGKKIPIIAGEWGY
PSSTAWRQGKVIDPTTQAKYLGRQWLNNLANEIPLSIWYDWQNNGPKAEDPEHNYGLIGYADPKQNRPTYEVKPAYRAAQ
ALNQSLKGFQFNKRLDVGRADDYVLLFNQGNQVKIAAWTTAQSPHTTVIPTSPGSFRALDYLGQNPKTLKATTQGLSLSL
TDAPQYLTPTQPNALLQLAAAWETLPLEQVVPGSQTIDVPLRLRNPLSTPIQVNTGTQIATIPPRQTQSLVTTVTPSRQG
KAQPLRLEWQVRGLGVLTQRTDLLLTNPLTATILPMGANQLTVVLQNPAGTALKGRATLTNLQGLGVTTRSQPIQFASGE
TQKYLKFKARRTQSTYQAGLEVTEGGTLHTFPPQQFKTVINFADLNAKTVGQALQTIPGGDAKVRSQQSLTVIPSASRYA
TTVGRNVLKITYQFQAGWKYLHLLPTRQYQSRLSIQGRPQSLGLWIHGDGSGNQISLRYQDKTGQIFQPKSQVITWKGWR
YITFALDGQDATVWGGAADGIVHYPMQLNSLLAIDNAKKQVTSGEIYVGQPTLVW
>Mature_774_residues
GSISAQFNPKQLEVPDGFGVAIHFTDPKPGEMDLLEASGVRWIRADLVWLRTEVKKGQYDFSAYDRLLDQLERHNLRAIF
ILDYGNPLYDGGFSPHTDAGRQAFARWAVAAVKHFQGRGVVWEMYNEPNILPFWSPRPNVQDYIKLAKTVGKAIHRVYPQ
EVIIGPALAGSVNKPGRQEFLEACFQAGLLEDWSAVSIHPYRITRPETVTRDYRQLRLLIAKYAPPGKKIPIIAGEWGYP
SSTAWRQGKVIDPTTQAKYLGRQWLNNLANEIPLSIWYDWQNNGPKAEDPEHNYGLIGYADPKQNRPTYEVKPAYRAAQA
LNQSLKGFQFNKRLDVGRADDYVLLFNQGNQVKIAAWTTAQSPHTTVIPTSPGSFRALDYLGQNPKTLKATTQGLSLSLT
DAPQYLTPTQPNALLQLAAAWETLPLEQVVPGSQTIDVPLRLRNPLSTPIQVNTGTQIATIPPRQTQSLVTTVTPSRQGK
AQPLRLEWQVRGLGVLTQRTDLLLTNPLTATILPMGANQLTVVLQNPAGTALKGRATLTNLQGLGVTTRSQPIQFASGET
QKYLKFKARRTQSTYQAGLEVTEGGTLHTFPPQQFKTVINFADLNAKTVGQALQTIPGGDAKVRSQQSLTVIPSASRYAT
TVGRNVLKITYQFQAGWKYLHLLPTRQYQSRLSIQGRPQSLGLWIHGDGSGNQISLRYQDKTGQIFQPKSQVITWKGWRY
ITFALDGQDATVWGGAADGIVHYPMQLNSLLAIDNAKKQVTSGEIYVGQPTLVW

Specific function: Unknown

COG id: COG3664

COG function: function code G; Beta-xylosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86176; Mature: 86045

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS00659 GLYCOSYL_HYDROL_F5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSISAQFNPKQLEVPDGFGVAIHFTDPKPGEMDLLEASGVRWIRADLVWLRTEVKKGQY
CCCCCCCCCCCEEECCCCCEEEEEECCCCCCCEEEEECCCCEEEEHHHEEEEHHHCCCCC
DFSAYDRLLDQLERHNLRAIFILDYGNPLYDGGFSPHTDAGRQAFARWAVAAVKHFQGRG
CHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
VVWEMYNEPNILPFWSPRPNVQDYIKLAKTVGKAIHRVYPQEVIIGPALAGSVNKPGRQE
EEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHCCCCCCCHHHH
FLEACFQAGLLEDWSAVSIHPYRITRPETVTRDYRQLRLLIAKYAPPGKKIPIIAGEWGY
HHHHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
PSSTAWRQGKVIDPTTQAKYLGRQWLNNLANEIPLSIWYDWQNNGPKAEDPEHNYGLIGY
CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEE
ADPKQNRPTYEVKPAYRAAQALNQSLKGFQFNKRLDVGRADDYVLLFNQGNQVKIAAWTT
CCCCCCCCCEEECHHHHHHHHHHHHHCCCEECCEECCCCCCCEEEEECCCCEEEEEEEEE
AQSPHTTVIPTSPGSFRALDYLGQNPKTLKATTQGLSLSLTDAPQYLTPTQPNALLQLAA
CCCCCEEEEECCCCCEEHHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHH
AWETLPLEQVVPGSQTIDVPLRLRNPLSTPIQVNTGTQIATIPPRQTQSLVTTVTPSRQG
HHCCCCHHHHCCCCCEEEEEEEECCCCCCCEEECCCCEEEECCCCCCCCEEEEECCCCCC
KAQPLRLEWQVRGLGVLTQRTDLLLTNPLTATILPMGANQLTVVLQNPAGTALKGRATLT
CCCCEEEEEEEECEEEEEECCCEEEECCCEEEEEECCCCEEEEEEECCCCCEEECCEEEE
NLQGLGVTTRSQPIQFASGETQKYLKFKARRTQSTYQAGLEVTEGGTLHTFPPQQFKTVI
CCCCCCEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHH
NFADLNAKTVGQALQTIPGGDAKVRSQQSLTVIPSASRYATTVGRNVLKITYQFQAGWKY
HHHCCCHHHHHHHHHHCCCCCCEECCCCCEEEECCCHHHHHHHCCEEEEEEEEEECCCEE
LHLLPTRQYQSRLSIQGRPQSLGLWIHGDGSGNQISLRYQDKTGQIFQPKSQVITWKGWR
EEEECCHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCEECCCCCEEEEECCE
YITFALDGQDATVWGGAADGIVHYPMQLNSLLAIDNAKKQVTSGEIYVGQPTLVW
EEEEEECCCCCEEECCCCCCEEECCEECCEEEEECCCCHHCCCCEEEECCCEECC
>Mature Secondary Structure 
GSISAQFNPKQLEVPDGFGVAIHFTDPKPGEMDLLEASGVRWIRADLVWLRTEVKKGQY
CCCCCCCCCCEEECCCCCEEEEEECCCCCCCEEEEECCCCEEEEHHHEEEEHHHCCCCC
DFSAYDRLLDQLERHNLRAIFILDYGNPLYDGGFSPHTDAGRQAFARWAVAAVKHFQGRG
CHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
VVWEMYNEPNILPFWSPRPNVQDYIKLAKTVGKAIHRVYPQEVIIGPALAGSVNKPGRQE
EEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHCCCCCCCHHHH
FLEACFQAGLLEDWSAVSIHPYRITRPETVTRDYRQLRLLIAKYAPPGKKIPIIAGEWGY
HHHHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
PSSTAWRQGKVIDPTTQAKYLGRQWLNNLANEIPLSIWYDWQNNGPKAEDPEHNYGLIGY
CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEE
ADPKQNRPTYEVKPAYRAAQALNQSLKGFQFNKRLDVGRADDYVLLFNQGNQVKIAAWTT
CCCCCCCCCEEECHHHHHHHHHHHHHCCCEECCEECCCCCCCEEEEECCCCEEEEEEEEE
AQSPHTTVIPTSPGSFRALDYLGQNPKTLKATTQGLSLSLTDAPQYLTPTQPNALLQLAA
CCCCCEEEEECCCCCEEHHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHH
AWETLPLEQVVPGSQTIDVPLRLRNPLSTPIQVNTGTQIATIPPRQTQSLVTTVTPSRQG
HHCCCCHHHHCCCCCEEEEEEEECCCCCCCEEECCCCEEEECCCCCCCCEEEEECCCCCC
KAQPLRLEWQVRGLGVLTQRTDLLLTNPLTATILPMGANQLTVVLQNPAGTALKGRATLT
CCCCEEEEEEEECEEEEEECCCEEEECCCEEEEEECCCCEEEEEEECCCCCEEECCEEEE
NLQGLGVTTRSQPIQFASGETQKYLKFKARRTQSTYQAGLEVTEGGTLHTFPPQQFKTVI
CCCCCCEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHH
NFADLNAKTVGQALQTIPGGDAKVRSQQSLTVIPSASRYATTVGRNVLKITYQFQAGWKY
HHHCCCHHHHHHHHHHCCCCCCEECCCCCEEEECCCHHHHHHHCCEEEEEEEEEECCCEE
LHLLPTRQYQSRLSIQGRPQSLGLWIHGDGSGNQISLRYQDKTGQIFQPKSQVITWKGWR
EEEECCHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCEECCCCCEEEEECCE
YITFALDGQDATVWGGAADGIVHYPMQLNSLLAIDNAKKQVTSGEIYVGQPTLVW
EEEEEECCCCCEEECCCCCCEEECCEECCEEEEECCCCHHCCCCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA