Click here to switch to the map view.

The map label for this gene is pfpI [H]

Identifier: 158335036

GI number: 158335036

Start: 1861771

End: 1862370

Strand: Reverse

Name: pfpI [H]

Synonym: AM1_1874

Alternate gene names: 158335036

Gene position: 1862370-1861771 (Counterclockwise)

Preceding gene: 158335037

Following gene: 158335035

Centisome position: 28.64

GC content: 48.67

Gene sequence:

>600_bases
ATGGCTAGCAAAAAAATCTTGATGCTGGTGGGTGACTTTGTCGAAGACTATGAAGTCATGGTTCCTTTCCAAGCATTGTT
AATGGTCGGTCATACCGTACATGCGGTTTGTCCTAATAAGAAATCTGGTGAGTCCGTAAGAACAGCGATTCATGACTTTG
AAGGCGATCAAACCTACAGTGAAAAACCGGGCCATAACTTTGTGCTGAATGCCACCTTTGCAGAGGTTTCTGCTGCCGAT
TACGATGCACTAGTCATTCCAGGTGGTAGAGCCCCAGAGTATTTGCGCCTTAACCCCGAAGTTATCCAAATCGTGCAGCA
CTTTGCTCAAACCAATAAGCCCTTGGCAGCAATTTGTCATGGAGCCCAATTGCTATCTGCTGCAGGTGTTTTGGCGGGAA
AGCGCTGTTCAGCCTACCCAGCCTGTGGCCCAGAAGTTGCTGCTGCGGGTGGGGAATATGTAGATCTGGCTGTGGATGAT
GCCTTAATTGATGGCAATTTGGTCACCGCACCGGCTTGGCCTGCTCATCCCAAATGGCTATCTGCGTTTTTACAGGTTTT
AGGCACTCAGATTGAACACCCGGAAGCCGTGCTTACTTGA

Upstream 100 bases:

>100_bases
ACAGAGACAATTGTGATGACTATTCTGGGAACTTGGCTGATATTCTCAAAGGAGAAGTCCAAAGCTTAGAATAATATCTT
CAACATGGGGGCCAATCGCG

Downstream 100 bases:

>100_bases
TCATGTGGCTTTAATACTTCAATTTTCTTGAGCCGGGTTTGCATATCAGCAGGCGATTGCTGCTAATACGGATAGCAGAT
GGGCATACTGACGGTGAGCT

Product: peptidase C56, PfpI

Products: NA

Alternate protein names: Intracellular protease I [H]

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MASKKILMLVGDFVEDYEVMVPFQALLMVGHTVHAVCPNKKSGESVRTAIHDFEGDQTYSEKPGHNFVLNATFAEVSAAD
YDALVIPGGRAPEYLRLNPEVIQIVQHFAQTNKPLAAICHGAQLLSAAGVLAGKRCSAYPACGPEVAAAGGEYVDLAVDD
ALIDGNLVTAPAWPAHPKWLSAFLQVLGTQIEHPEAVLT

Sequences:

>Translated_199_residues
MASKKILMLVGDFVEDYEVMVPFQALLMVGHTVHAVCPNKKSGESVRTAIHDFEGDQTYSEKPGHNFVLNATFAEVSAAD
YDALVIPGGRAPEYLRLNPEVIQIVQHFAQTNKPLAAICHGAQLLSAAGVLAGKRCSAYPACGPEVAAAGGEYVDLAVDD
ALIDGNLVTAPAWPAHPKWLSAFLQVLGTQIEHPEAVLT
>Mature_198_residues
ASKKILMLVGDFVEDYEVMVPFQALLMVGHTVHAVCPNKKSGESVRTAIHDFEGDQTYSEKPGHNFVLNATFAEVSAADY
DALVIPGGRAPEYLRLNPEVIQIVQHFAQTNKPLAAICHGAQLLSAAGVLAGKRCSAYPACGPEVAAAGGEYVDLAVDDA
LIDGNLVTAPAWPAHPKWLSAFLQVLGTQIEHPEAVLT

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=187, Percent_Identity=31.5508021390374, Blast_Score=94, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 21217; Mature: 21086

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKKILMLVGDFVEDYEVMVPFQALLMVGHTVHAVCPNKKSGESVRTAIHDFEGDQTYS
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCHHHHHHHHHCCCCCCCC
EKPGHNFVLNATFAEVSAADYDALVIPGGRAPEYLRLNPEVIQIVQHFAQTNKPLAAICH
CCCCCEEEEEEHHHHHHCCCCCEEEECCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHH
GAQLLSAAGVLAGKRCSAYPACGPEVAAAGGEYVDLAVDDALIDGNLVTAPAWPAHPKWL
HHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEECCEEECCCEEECCCCCCCHHHH
SAFLQVLGTQIEHPEAVLT
HHHHHHHCCCCCCCHHHCC
>Mature Secondary Structure 
ASKKILMLVGDFVEDYEVMVPFQALLMVGHTVHAVCPNKKSGESVRTAIHDFEGDQTYS
CCCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCHHHHHHHHHCCCCCCCC
EKPGHNFVLNATFAEVSAADYDALVIPGGRAPEYLRLNPEVIQIVQHFAQTNKPLAAICH
CCCCCEEEEEEHHHHHHCCCCCEEEECCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHH
GAQLLSAAGVLAGKRCSAYPACGPEVAAAGGEYVDLAVDDALIDGNLVTAPAWPAHPKWL
HHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEECCEEECCCEEECCCCCCCHHHH
SAFLQVLGTQIEHPEAVLT
HHHHHHHCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]