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The map label for this gene is yebC [C]

Identifier: 158335009

GI number: 158335009

Start: 1835000

End: 1835761

Strand: Reverse

Name: yebC [C]

Synonym: AM1_1847

Alternate gene names: 158335009

Gene position: 1835761-1835000 (Counterclockwise)

Preceding gene: 158335013

Following gene: 158335007

Centisome position: 28.23

GC content: 48.43

Gene sequence:

>762_bases
ATGGCAGGACATAGTAAATGGGCCAATATTAAACGGCAAAAAGCAAGGGTAGATGCGAAGAAAGGGAAGGTATTTGCTCG
CCTCTCCAGAGCTATTATTGTGGCAGCTCGCCATGGTTCGGCTGATCCTAACGGTAATTTTCAATTGCGCTCTGCGATCG
ATAAAGCGAAAGCTGCCGGTATTCCTAACGAAAATATTGACCGGGCTATTGCGAAAGGCTCAGGGCAGCTTGATGCGGAA
GGCGATCAGTGGGAAGAGATTCGTTACGAAGGGTATGGCATTGGTGGCGTCGCCCTTTTAATTGAGGCAATGACCGATAA
TCGCAATCGGACCGCAGCTGATCTGCGGGCGGCATTCAATAAGTATGGCGGTAATTTAGGTGAAACGGGATGCGTGGGCT
GGATGTTTCATCAGCAAGGTATTATTTCCATTCTTGGGCCGGTTGATGAAGATCAACTCCTGGAGTCTCTAGTCGAAACA
GGGGCGGACTCTTATGAGTTTGTGGAAGAAAATGCTCAAGCCATTGCTGAGGTGAGTACGGATGTAACTGTATTAGAAAC
GGTGACTGAAGCCCTCAAAGCTCAAGACTTCCAGATTTTGGATGCTGAAATACGCTGGATCGGGGAAATGTCTGTTGCGA
TCGCAGATCCCGATCAAGCCAAATCGCTGATTCGCCTAATGGATGCCCTAGAAGATCTAGACGATGTGCAATCCGTCACG
GCCAATGTTGAATTTATGGATAACGCCTTAGCCGGCCTGTAA

Upstream 100 bases:

>100_bases
GGAATAAATATGCAGGTTTGACACCTCCTATTCAGGGGGCTGGGCAGTGCCATAATGAAAACCGTGACCGCTTCTATAGG
ATTGATTGTTTGGGCTACGC

Downstream 100 bases:

>100_bases
AGCTGAAAATTCTAGGTCGTTTGTAAGGAGTCAGACAACATCCCTGCTGTTAGGAACCAATAGAAATCGGCCCTCGTGAT
CTTTTGATCGGGGAAAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MAGHSKWANIKRQKARVDAKKGKVFARLSRAIIVAARHGSADPNGNFQLRSAIDKAKAAGIPNENIDRAIAKGSGQLDAE
GDQWEEIRYEGYGIGGVALLIEAMTDNRNRTAADLRAAFNKYGGNLGETGCVGWMFHQQGIISILGPVDEDQLLESLVET
GADSYEFVEENAQAIAEVSTDVTVLETVTEALKAQDFQILDAEIRWIGEMSVAIADPDQAKSLIRLMDALEDLDDVQSVT
ANVEFMDNALAGL

Sequences:

>Translated_253_residues
MAGHSKWANIKRQKARVDAKKGKVFARLSRAIIVAARHGSADPNGNFQLRSAIDKAKAAGIPNENIDRAIAKGSGQLDAE
GDQWEEIRYEGYGIGGVALLIEAMTDNRNRTAADLRAAFNKYGGNLGETGCVGWMFHQQGIISILGPVDEDQLLESLVET
GADSYEFVEENAQAIAEVSTDVTVLETVTEALKAQDFQILDAEIRWIGEMSVAIADPDQAKSLIRLMDALEDLDDVQSVT
ANVEFMDNALAGL
>Mature_252_residues
AGHSKWANIKRQKARVDAKKGKVFARLSRAIIVAARHGSADPNGNFQLRSAIDKAKAAGIPNENIDRAIAKGSGQLDAEG
DQWEEIRYEGYGIGGVALLIEAMTDNRNRTAADLRAAFNKYGGNLGETGCVGWMFHQQGIISILGPVDEDQLLESLVETG
ADSYEFVEENAQAIAEVSTDVTVLETVTEALKAQDFQILDAEIRWIGEMSVAIADPDQAKSLIRLMDALEDLDDVQSVTA
NVEFMDNALAGL

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=254, Percent_Identity=27.9527559055118, Blast_Score=98, Evalue=8e-21,
Organism=Escherichia coli, GI1788171, Length=253, Percent_Identity=42.6877470355731, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1788294, Length=239, Percent_Identity=37.2384937238494, Blast_Score=140, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI17556100, Length=247, Percent_Identity=25.1012145748988, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=32.6996197718631, Blast_Score=120, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24583305, Length=253, Percent_Identity=28.0632411067194, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1847_ACAM1 (B0CDE2)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001516181.1
- ProteinModelPortal:   B0CDE2
- SMR:   B0CDE2
- GeneID:   5680663
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_1847
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   AMAR329726:AM1_1847-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27379; Mature: 27248

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKRQKARVDAKKGKVFARLSRAIIVAARHGSADPNGNFQLRSAIDKAKAAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHCC
IPNENIDRAIAKGSGQLDAEGDQWEEIRYEGYGIGGVALLIEAMTDNRNRTAADLRAAFN
CCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
KYGGNLGETGCVGWMFHQQGIISILGPVDEDQLLESLVETGADSYEFVEENAQAIAEVST
HHCCCCCCCCCEEHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
DVTVLETVTEALKAQDFQILDAEIRWIGEMSVAIADPDQAKSLIRLMDALEDLDDVQSVT
CHHHHHHHHHHHHHCCCCEEHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
ANVEFMDNALAGL
HHHHHHHHHHHCC
>Mature Secondary Structure 
AGHSKWANIKRQKARVDAKKGKVFARLSRAIIVAARHGSADPNGNFQLRSAIDKAKAAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHCC
IPNENIDRAIAKGSGQLDAEGDQWEEIRYEGYGIGGVALLIEAMTDNRNRTAADLRAAFN
CCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
KYGGNLGETGCVGWMFHQQGIISILGPVDEDQLLESLVETGADSYEFVEENAQAIAEVST
HHCCCCCCCCCEEHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
DVTVLETVTEALKAQDFQILDAEIRWIGEMSVAIADPDQAKSLIRLMDALEDLDDVQSVT
CHHHHHHHHHHHHHCCCCEEHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
ANVEFMDNALAGL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA