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The map label for this gene is 158334950

Identifier: 158334950

GI number: 158334950

Start: 1778108

End: 1778923

Strand: Reverse

Name: 158334950

Synonym: AM1_1787

Alternate gene names: NA

Gene position: 1778923-1778108 (Counterclockwise)

Preceding gene: 158334951

Following gene: 158334948

Centisome position: 27.35

GC content: 45.83

Gene sequence:

>816_bases
TTGATTAAACGTGGGTTACATCTGGCGAATGAAATTGAAGACGATCTGGTCAATTCTGTCTCTGAATCCGAAGGTCAAAA
CAAACCACCACAGAATGAACAGGAGCCGGTTACTGCAGGCTATCAAAATCCTAAACAACCTGAATCTCCGTTCCCACCGG
ACCCTTTAGAGGGGTTGACTCTGGTTCAACCGACCGTTACGAGTCAACCTACTCTCAATCCAGAAGAGACGGATGAAACC
TCTTGGGCGATGGTTTGGCTGCGGCGAGGGCTGCATAAGTATGAGCAAGCAGATTATGTTGGGGCAAAGGATAATTTTAA
GCAAGCGATTCAAAAGCAGCCCACTTTAGCTGCAGCCCACAACGGCTTGGGCAGTGTTTTGTATCAATTTCGAAATTTTG
TCGAAGCGGTTGTTGTGTATAACCAAGCTTTGGACTATGCTCCTGAGAATGCTGAACTCTATTGCAATCTGGCGAGCGCT
CTGTATCGCATTCAAAATTATGATGAGGCTGCCCTAGCTTACCAAAAAGCGATTCACTATAACGCTTACTTGCATGCTGC
CTATTATGGGTTGGGGCTAGCCCAGTTTCAAATTGGGTTTCAAGAAGAAGCAATGACAGCTTTTGAGCAAGCCACCCAAC
TAAATATTCAGCATGCTGAGAGCTTTCTAGGCTTGGCTGTAACCCATTTTGAATTTGGGGAGTACCCAGAGGCCAGTATT
GCCTTAGAGCAGGCAATGCAGTTAAACCCTGTCTATATCGAAGCCTATTTTAGGCTGCAGAAGTTTGTGGATGTATTAGG
GGATAGCTCTCACTGA

Upstream 100 bases:

>100_bases
TGGGATAGAGATTATGGTGGAGGGGCCCCATGAACAGTCCCAGCAGGGTAAGTTCAATCTTCCATCTCTTCATGTTCGTG
TTGACGATCAGATGTCCTCG

Downstream 100 bases:

>100_bases
AGCTGAGAGAGATTCCTTGGGATGGCAACAGCTAAGAGTCGCCACATGGAGTGCCTGAGGACTGCAGCGCTGGCTTACCG
AAAGTTGGGATACCAAAACA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Family; O-Linked N-Acetylglucosamine Transferase; Peptidase; TPR Domain Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; O-Linked GlcNAc Transferase; Glycosyl Transferase Family Protein; TPR Repeat Protein; Sel1 Repeat Family; TPR Domain Containing Protein; Tetratricopeptide Repeat Family Protein; GUN4 Domain-Containing Protein; Sulfotransferase; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Domain-Containing Protein; TPR Repeat; TPR Repeat-Containing Serine/Threonine Protein Kinase; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; TPR Repeats Containing Protein; TPR Repeat- And Protein Kinase Domain-Containing Protein; Mitochondrial Outer Membrane; TPR Repeat-Containing Protein Kinase

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MIKRGLHLANEIEDDLVNSVSESEGQNKPPQNEQEPVTAGYQNPKQPESPFPPDPLEGLTLVQPTVTSQPTLNPEETDET
SWAMVWLRRGLHKYEQADYVGAKDNFKQAIQKQPTLAAAHNGLGSVLYQFRNFVEAVVVYNQALDYAPENAELYCNLASA
LYRIQNYDEAALAYQKAIHYNAYLHAAYYGLGLAQFQIGFQEEAMTAFEQATQLNIQHAESFLGLAVTHFEFGEYPEASI
ALEQAMQLNPVYIEAYFRLQKFVDVLGDSSH

Sequences:

>Translated_271_residues
MIKRGLHLANEIEDDLVNSVSESEGQNKPPQNEQEPVTAGYQNPKQPESPFPPDPLEGLTLVQPTVTSQPTLNPEETDET
SWAMVWLRRGLHKYEQADYVGAKDNFKQAIQKQPTLAAAHNGLGSVLYQFRNFVEAVVVYNQALDYAPENAELYCNLASA
LYRIQNYDEAALAYQKAIHYNAYLHAAYYGLGLAQFQIGFQEEAMTAFEQATQLNIQHAESFLGLAVTHFEFGEYPEASI
ALEQAMQLNPVYIEAYFRLQKFVDVLGDSSH
>Mature_271_residues
MIKRGLHLANEIEDDLVNSVSESEGQNKPPQNEQEPVTAGYQNPKQPESPFPPDPLEGLTLVQPTVTSQPTLNPEETDET
SWAMVWLRRGLHKYEQADYVGAKDNFKQAIQKQPTLAAAHNGLGSVLYQFRNFVEAVVVYNQALDYAPENAELYCNLASA
LYRIQNYDEAALAYQKAIHYNAYLHAAYYGLGLAQFQIGFQEEAMTAFEQATQLNIQHAESFLGLAVTHFEFGEYPEASI
ALEQAMQLNPVYIEAYFRLQKFVDVLGDSSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=174, Percent_Identity=29.3103448275862, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI32307150, Length=174, Percent_Identity=29.3103448275862, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI115532690, Length=174, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI115532692, Length=174, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI17647755, Length=178, Percent_Identity=30.3370786516854, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585827, Length=178, Percent_Identity=30.3370786516854, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585829, Length=178, Percent_Identity=30.3370786516854, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30470; Mature: 30470

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRGLHLANEIEDDLVNSVSESEGQNKPPQNEQEPVTAGYQNPKQPESPFPPDPLEGLT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
LVQPTVTSQPTLNPEETDETSWAMVWLRRGLHKYEQADYVGAKDNFKQAIQKQPTLAAAH
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHH
NGLGSVLYQFRNFVEAVVVYNQALDYAPENAELYCNLASALYRIQNYDEAALAYQKAIHY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHCCCHHHHHHHHHHHH
NAYLHAAYYGLGLAQFQIGFQEEAMTAFEQATQLNIQHAESFLGLAVTHFEFGEYPEASI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ALEQAMQLNPVYIEAYFRLQKFVDVLGDSSH
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIKRGLHLANEIEDDLVNSVSESEGQNKPPQNEQEPVTAGYQNPKQPESPFPPDPLEGLT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
LVQPTVTSQPTLNPEETDETSWAMVWLRRGLHKYEQADYVGAKDNFKQAIQKQPTLAAAH
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHH
NGLGSVLYQFRNFVEAVVVYNQALDYAPENAELYCNLASALYRIQNYDEAALAYQKAIHY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHCCCHHHHHHHHHHHH
NAYLHAAYYGLGLAQFQIGFQEEAMTAFEQATQLNIQHAESFLGLAVTHFEFGEYPEASI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ALEQAMQLNPVYIEAYFRLQKFVDVLGDSSH
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA