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The map label for this gene is rca [H]

Identifier: 158334944

GI number: 158334944

Start: 1772270

End: 1773520

Strand: Reverse

Name: rca [H]

Synonym: AM1_1781

Alternate gene names: 158334944

Gene position: 1773520-1772270 (Counterclockwise)

Preceding gene: 158334945

Following gene: 158334943

Centisome position: 27.27

GC content: 51.96

Gene sequence:

>1251_bases
ATGGGTTATTATCTATCGCCTCGATTTCTAGATCGACTGGCGGTCCATATCACCAAGAACTTTATGGACTTGCCAGGGCT
GCGGGTGCCTTTGATATTGGGGATTCATGGTCGCAAGGGAGAAGGAAAATCGTTTCAGTGTGAACTGTTGTTTGAGCAGA
TGGGCATTGAGCCCGTGCGCATGTCAGCGGGAGAGCTGGAAAGTCCTGATGCGGGCGATCCGGTACGCTTGATTCGGATG
CGCTATCGAGAAGCAGCAGAGTTGATCAAGGTTCGGGGCAAGATGTGTGTGCTGTTGATTAATGACCTGGATGCGGGAGC
GGGTCGAATGGATCAGACGACCCAATATACCGTTAATACCCAGCTGGTGAACGGTACCCTGATGAATATTGCCGATAACC
CCACGGATGTGCAGCTACCGGGTAGCTACGATACTCAGCCCATTCGCCGGGTGCCGATTTTAGTGACGGGCAATGATTTT
TCCACCCTCTATGCTCCTCTGGTGCGGGATGGGCGGATGGATAAGTTCTATTGGCAGCCCAACCATGAGGATCGGTTGGG
GATTGTCCAGGGGATTTTTGAGCCGGATCGGTTATCCAGTTCTGTGATTGAACAGCTGGTCAATCATTTTGCCGACCAGG
CCATCGACTTTTTTGGGGCATTGAGATCGCGCATCTATGACGAACAGGTGCGAGACTTTATTCGCAATCTTGGTATTGGC
AACGTCTCTACTTATTTGGTCAATTCTCCTGAGCGACAGGTACAGATCCAGCCCCCGGCTCTGACGTTGGACTATTTAAT
TAATCTGGGTGAGGCAATGGTGGGCGAGCAAGACCGTCTGCACCATGCTGGCTTGGCTCAAGCTTACCTGTCGGGAGCAA
AGGCTGAACCTGTTAAACCGTCTCCGCCCCCATCTGAACCAGAGGCAAACCACTACCTCCAGGCTGATATCGCTCCTCAA
TCCCAGGGAGATTGGCCTGACTATATTGCCCATCATGAGATTGAGCATCTGTTTCAGCAAGCCATGCGTCAGGGCAGTCA
ACTGAATCTAGAAACCGCTACGCAACGGGAAAAGGCGGGTAATGTTTGGCGTAGCTGGACTTGGCCACAAGCGCCTCGAA
CGGTGACGGATGCCATGGCGGGGTTGCAAACCTGTCTGCAAGATCATCCCCAAAGTTACATTAAGTTGATTGGGTATGAT
CCGCGTACCCAAACCCGTACCCTAGAAGAACTGATTGTTCGTCCCCAGTAA

Upstream 100 bases:

>100_bases
AGCTTTGTTTATACCTATTAATTCAAGTTGGCCTAATTTTTAGGTGTGATATCCCTATGTTTTAATCCACCTTGCCCCTC
CCAACATTTGAGCTTCGACC

Downstream 100 bases:

>100_bases
TTCTGTTGATCGCGACCTGTGCCCATGACTTCCTTTACACCCCCTGGATCTAGCCCTGATATTGATGTTGACCAGCTTTT
ACTGATGCTGCGTCGCAAGG

Product: ribulose bisphosphate carboxylase activase

Products: NA

Alternate protein names: RA; RuBisCO activase [H]

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MGYYLSPRFLDRLAVHITKNFMDLPGLRVPLILGIHGRKGEGKSFQCELLFEQMGIEPVRMSAGELESPDAGDPVRLIRM
RYREAAELIKVRGKMCVLLINDLDAGAGRMDQTTQYTVNTQLVNGTLMNIADNPTDVQLPGSYDTQPIRRVPILVTGNDF
STLYAPLVRDGRMDKFYWQPNHEDRLGIVQGIFEPDRLSSSVIEQLVNHFADQAIDFFGALRSRIYDEQVRDFIRNLGIG
NVSTYLVNSPERQVQIQPPALTLDYLINLGEAMVGEQDRLHHAGLAQAYLSGAKAEPVKPSPPPSEPEANHYLQADIAPQ
SQGDWPDYIAHHEIEHLFQQAMRQGSQLNLETATQREKAGNVWRSWTWPQAPRTVTDAMAGLQTCLQDHPQSYIKLIGYD
PRTQTRTLEELIVRPQ

Sequences:

>Translated_416_residues
MGYYLSPRFLDRLAVHITKNFMDLPGLRVPLILGIHGRKGEGKSFQCELLFEQMGIEPVRMSAGELESPDAGDPVRLIRM
RYREAAELIKVRGKMCVLLINDLDAGAGRMDQTTQYTVNTQLVNGTLMNIADNPTDVQLPGSYDTQPIRRVPILVTGNDF
STLYAPLVRDGRMDKFYWQPNHEDRLGIVQGIFEPDRLSSSVIEQLVNHFADQAIDFFGALRSRIYDEQVRDFIRNLGIG
NVSTYLVNSPERQVQIQPPALTLDYLINLGEAMVGEQDRLHHAGLAQAYLSGAKAEPVKPSPPPSEPEANHYLQADIAPQ
SQGDWPDYIAHHEIEHLFQQAMRQGSQLNLETATQREKAGNVWRSWTWPQAPRTVTDAMAGLQTCLQDHPQSYIKLIGYD
PRTQTRTLEELIVRPQ
>Mature_415_residues
GYYLSPRFLDRLAVHITKNFMDLPGLRVPLILGIHGRKGEGKSFQCELLFEQMGIEPVRMSAGELESPDAGDPVRLIRMR
YREAAELIKVRGKMCVLLINDLDAGAGRMDQTTQYTVNTQLVNGTLMNIADNPTDVQLPGSYDTQPIRRVPILVTGNDFS
TLYAPLVRDGRMDKFYWQPNHEDRLGIVQGIFEPDRLSSSVIEQLVNHFADQAIDFFGALRSRIYDEQVRDFIRNLGIGN
VSTYLVNSPERQVQIQPPALTLDYLINLGEAMVGEQDRLHHAGLAQAYLSGAKAEPVKPSPPPSEPEANHYLQADIAPQS
QGDWPDYIAHHEIEHLFQQAMRQGSQLNLETATQREKAGNVWRSWTWPQAPRTVTDAMAGLQTCLQDHPQSYIKLIGYDP
RTQTRTLEELIVRPQ

Specific function: Activation of RuBisCO (ribulose-1,5-bisohosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO activase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003959
- InterPro:   IPR000894 [H]

Pfam domain/function: PF00004 AAA; PF00101 RuBisCO_small [H]

EC number: NA

Molecular weight: Translated: 46968; Mature: 46837

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYYLSPRFLDRLAVHITKNFMDLPGLRVPLILGIHGRKGEGKSFQCELLFEQMGIEPVR
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEHEEHHHHHCCCEEE
MSAGELESPDAGDPVRLIRMRYREAAELIKVRGKMCVLLINDLDAGAGRMDQTTQYTVNT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEE
QLVNGTLMNIADNPTDVQLPGSYDTQPIRRVPILVTGNDFSTLYAPLVRDGRMDKFYWQP
EEECCEEEECCCCCCCEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEECC
NHEDRLGIVQGIFEPDRLSSSVIEQLVNHFADQAIDFFGALRSRIYDEQVRDFIRNLGIG
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NVSTYLVNSPERQVQIQPPALTLDYLINLGEAMVGEQDRLHHAGLAQAYLSGAKAEPVKP
CCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
SPPPSEPEANHYLQADIAPQSQGDWPDYIAHHEIEHLFQQAMRQGSQLNLETATQREKAG
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
NVWRSWTWPQAPRTVTDAMAGLQTCLQDHPQSYIKLIGYDPRTQTRTLEELIVRPQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHEEECCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
GYYLSPRFLDRLAVHITKNFMDLPGLRVPLILGIHGRKGEGKSFQCELLFEQMGIEPVR
CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEHEEHHHHHCCCEEE
MSAGELESPDAGDPVRLIRMRYREAAELIKVRGKMCVLLINDLDAGAGRMDQTTQYTVNT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEE
QLVNGTLMNIADNPTDVQLPGSYDTQPIRRVPILVTGNDFSTLYAPLVRDGRMDKFYWQP
EEECCEEEECCCCCCCEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEECC
NHEDRLGIVQGIFEPDRLSSSVIEQLVNHFADQAIDFFGALRSRIYDEQVRDFIRNLGIG
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NVSTYLVNSPERQVQIQPPALTLDYLINLGEAMVGEQDRLHHAGLAQAYLSGAKAEPVKP
CCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
SPPPSEPEANHYLQADIAPQSQGDWPDYIAHHEIEHLFQQAMRQGSQLNLETATQREKAG
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
NVWRSWTWPQAPRTVTDAMAGLQTCLQDHPQSYIKLIGYDPRTQTRTLEELIVRPQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHEEECCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]