| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158334819
Identifier: 158334819
GI number: 158334819
Start: 1631072
End: 1631872
Strand: Direct
Name: 158334819
Synonym: AM1_1656
Alternate gene names: NA
Gene position: 1631072-1631872 (Clockwise)
Preceding gene: 158334817
Following gene: 158334820
Centisome position: 25.08
GC content: 47.57
Gene sequence:
>801_bases ATGCCTACAGCATATGATAGCGACCTCACCACCCTCCAATGGGAATTACTTGAACCTTTGATTCCTGCTGCTAAACCTGG AGGTAGACCTCGCACCACTGATATGCGCAGTGTTCTCAATGCCATTTTGTATCTCGTGGTTACGGGTTGTCAATGGAGAC AGCTACCTCATGATTTTCCCTGTTGGTCAACGGTCTATAGCTATTTTCGAAGGTGGCGTGATGATGGGACTTGGGTCCAC ATCAATGAACATCTACGCATGCAAGAGCGGGTGAGTGAAGACCGTCATCCGAGTCCCCGTGCTGCTATCTGTGATGCTCA ATCAGTCAAAGTTGGTAATCCTCGGTGTCACTCGATTGGGTTTGATGGTGGAAAACAGATTAAGGGGCGTAAACGTCATG TGCTCGTTGATACTTTAGGACTGGTTCTGATGGTGATAGTCACTGCTGCCAATATCTCTGACCAACGAGGGGCCAAAATA CTGTTTTGGAAAGCTCGACGCCAAGGTGCGAGTTTGTCCCGTCTAGTTCGGATATGGGCCGATGCTGGCTATCAAGGACA AGCTTTTATGAAGTGGGTAATGGACCGTTTTCAATATGTCTTGGAAGTGATCAAACGCTCAGATAATCTAGCGGGGTTTC AGGTTATTCCCAAACGATGGATTGTAGAACGGACGTTTGGGTGGTTACTGTGGTCTCGACGTCTTAATAAAGATTATGAG GTGCTGACCAGAACAGCTGAAGCGCTCGTATATGTAGCGATGATTCGACTCATGGTTCGAAGGCTGACTGAAGAAGCTTG A
Upstream 100 bases:
>100_bases ATCTTGGGCTTTTGGGGCTTAGAGGCTGTTTGAGAAGTGAGTAAAGCTCTCAAGGTACTAATCTGTCAATACACAAACAT TGGACAGGACTTTGAGAGCA
Downstream 100 bases:
>100_bases AACTTCTCAAACAGCCTCTTAGGAGAGATTGGCACTTAAAACATAAATATCCTTTTTTCAAGGAGTGTTGGTTTGACGAT AGGACGAAACGGCTAGATGC
Product: IS4 family transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase IS5 Family Protein; IS5 Family Transposase; Transposase Of; LOW QUALITY PROTEIN Transposase; IS4 Insertion Sequence Transposase Protein; Transposase Is4 Family Protein; Transposase-Like Protein; Transposase Fragment; Transposase Is4-Like Protein; Transposase And Inactivated Derivatives-Like; Transposase Protein; ISXo3 Transposase ORF B; Transposase And Inactivated Derivatives; Transposase IS5 Family Protein-Like Protein; Insertion Sequence; Family Transposase; Transposase IS4 Family; Transposon; IS4 Family Insertion Sequence Transposase Protein; Transposase Related Protein; Pseudo Transposase; Transposase Is4 Family; Insertion Sequence Transposase Protein; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; ISPs1 Transposase OrfA; Isxo3 Transposase Protein; Insertion Sequence Transposase Truncated Protein
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MPTAYDSDLTTLQWELLEPLIPAAKPGGRPRTTDMRSVLNAILYLVVTGCQWRQLPHDFPCWSTVYSYFRRWRDDGTWVH INEHLRMQERVSEDRHPSPRAAICDAQSVKVGNPRCHSIGFDGGKQIKGRKRHVLVDTLGLVLMVIVTAANISDQRGAKI LFWKARRQGASLSRLVRIWADAGYQGQAFMKWVMDRFQYVLEVIKRSDNLAGFQVIPKRWIVERTFGWLLWSRRLNKDYE VLTRTAEALVYVAMIRLMVRRLTEEA
Sequences:
>Translated_266_residues MPTAYDSDLTTLQWELLEPLIPAAKPGGRPRTTDMRSVLNAILYLVVTGCQWRQLPHDFPCWSTVYSYFRRWRDDGTWVH INEHLRMQERVSEDRHPSPRAAICDAQSVKVGNPRCHSIGFDGGKQIKGRKRHVLVDTLGLVLMVIVTAANISDQRGAKI LFWKARRQGASLSRLVRIWADAGYQGQAFMKWVMDRFQYVLEVIKRSDNLAGFQVIPKRWIVERTFGWLLWSRRLNKDYE VLTRTAEALVYVAMIRLMVRRLTEEA >Mature_265_residues PTAYDSDLTTLQWELLEPLIPAAKPGGRPRTTDMRSVLNAILYLVVTGCQWRQLPHDFPCWSTVYSYFRRWRDDGTWVHI NEHLRMQERVSEDRHPSPRAAICDAQSVKVGNPRCHSIGFDGGKQIKGRKRHVLVDTLGLVLMVIVTAANISDQRGAKIL FWKARRQGASLSRLVRIWADAGYQGQAFMKWVMDRFQYVLEVIKRSDNLAGFQVIPKRWIVERTFGWLLWSRRLNKDYEV LTRTAEALVYVAMIRLMVRRLTEEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30899; Mature: 30768
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAYDSDLTTLQWELLEPLIPAAKPGGRPRTTDMRSVLNAILYLVVTGCQWRQLPHDFP CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCC CWSTVYSYFRRWRDDGTWVHINEHLRMQERVSEDRHPSPRAAICDAQSVKVGNPRCHSIG HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCC FDGGKQIKGRKRHVLVDTLGLVLMVIVTAANISDQRGAKILFWKARRQGASLSRLVRIWA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH DAGYQGQAFMKWVMDRFQYVLEVIKRSDNLAGFQVIPKRWIVERTFGWLLWSRRLNKDYE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH VLTRTAEALVYVAMIRLMVRRLTEEA HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PTAYDSDLTTLQWELLEPLIPAAKPGGRPRTTDMRSVLNAILYLVVTGCQWRQLPHDFP CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCC CWSTVYSYFRRWRDDGTWVHINEHLRMQERVSEDRHPSPRAAICDAQSVKVGNPRCHSIG HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCC FDGGKQIKGRKRHVLVDTLGLVLMVIVTAANISDQRGAKILFWKARRQGASLSRLVRIWA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH DAGYQGQAFMKWVMDRFQYVLEVIKRSDNLAGFQVIPKRWIVERTFGWLLWSRRLNKDYE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH VLTRTAEALVYVAMIRLMVRRLTEEA HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA