| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is thrS [H]
Identifier: 158334707
GI number: 158334707
Start: 1523271
End: 1525091
Strand: Direct
Name: thrS [H]
Synonym: AM1_1540
Alternate gene names: 158334707
Gene position: 1523271-1525091 (Clockwise)
Preceding gene: 158334703
Following gene: 158334708
Centisome position: 23.42
GC content: 50.03
Gene sequence:
>1821_bases ATGTCCGCTGAACAGCAACCTGAACAACAGCCTGAAAAGATTCACTTACCCAAGACCAGTGAATCCGAACAACTCAAGAA AATCCGCCACACCACCTCTCATGTGATGGCGATGGCTGTTCAGAAGCTGTTTCCCGATGCCCAAGTTACCATTGGTCCGT GGATTGAGTCCGGTTTTTATTATGACTTTGACAGCCCCACTCCTTTTACAGATAAAGATTTGAAAGCCATCAAAAAAGAG ATGGTCAAAATCATTAAAAAGAAGCTGCCCGTAGAACGGGAAGAGGTGAGTCGGGAAGAGGCGAAGAAAAGAATAAAAGC GTTAGGAGAACCTTATAAGCTGGAGATTCTGGAGGATCTAGAGGATCCGATTACCCTCTATCACCTTGGCGATCAGTGGT GGGATTTGTGTGCCGGTCCCCATGTGGAGTCCACTGCCGATTTGAATCCTAAAGCGATTGCCCTAGAAAGCGTGGCGGGG GCCTATTGGCGAGGGGATGAAACCAAAGCCCAATTACAGCGTATCTATGGCACGGCTTGGGAAACCCCTGAACAGTTAGC AGAACATAAACGGCGGAAGGAAGAAGCCCTCCGTCGTGACCACCGAAAGCTCGGGAAAGAGCTGGGACTATTTCTCTTTT CCGATCTGGTGGGACCGGGATTGCCCTTATGGACACCTAAGGGAACCTTGCTGCGATCGCAACTCGAAGACTTCCTCAAA CAGGAACAAATCCAGCGAGGATATTTGGGGGTGACCACGCCCCATATTGCTCGGGTTGATCTGTTTAAGACTTCAGGGCA CTGGCAAAAATACCAAGAAGATATGTTCCCGCTGATGAGTGAGAACGATGCAGATCGCAGCTCTGAACAAGGCTTTGTGA TGAAGCCGATGAACTGTCCGTTTCATATCCAGATCTATAAGAGTGAGTTGCGGTCTTATCGCGACCTACCCATGCGGCTG GCAGAATTTGGCACCGTTTATCGGTATGAGCAATCCGGCGAGCTAGGGGGCCTCACACGAGTCCGCGGCTTTACCGTCGA TGACTCCCATTTATTTGTCACGCCTGATCAGCTCGATGATGAATTTCTCAAGGTGGTGGATTTAATTCTCTCCGTCTTTG AGAAGCTGCAGCTCAAGAATTTCAAAGCCCGTCTCAGCTTCCGTGATCCAGATTCAGACAAATATATTGGTTCTGATGAA GCTTGGGAAAAGTCTCAGAATGCCATTCGTCGAGCCGTGGAAACCTTGGGCATGGAGCATTTTGAAGGTATTGGCGAAGC TGCTTTCTATGGTCCGAAGCTGGACTTTATTTTCCAAGATGTCCTGGATCGGGAATGGCAGTTGGGAACGGTACAGGTGG ACTACAATCTACCCGAGCGCTTTGACCTGGAATTTATGGGAGAAGACGGTAACCGTCAGCGCCCGATTATGATTCACCGG GCTCCCTTCGGATCTTTAGAACGACTGATTGGTATCTTAATCGAGGAATATGCAGGTGTCTTTCCCCTATGGCTAGCCCC CGAACAGGTGCGGCTGTTGACGGTGAATGATGACCATATGCCCTTTGCCCAAGCGGTAGCCACGGATTTGCAGGCTGCGG GGATTCGAGTCTCCGTGGATCAAAGTGGCGATCGCCTAGGCAAGAAAATTCGCAATGCGGAGAAAGCCAAAATCCCAGTG ATGTCAGTGATTGGGGATAAGGAAGTCGAAGCCCATAGCCTCAATATTCGGACGCGGGCGTCAGGTGAGTTAGGGGCGAT TCCGGTGGATGAGGTGAAGCAGAAGTTAGGCGATGCGATCTCAACTTTCTCTGCCTTCTAG
Upstream 100 bases:
>100_bases TTGAGGTTTGAGGCCAAGTCTAACTTTATCGGTGATTCCTTCAAAGGTTTCGATAAGATGGGACAAGTCCGTAAAATTAG CTCAAACATATAGATCCATA
Downstream 100 bases:
>100_bases CCAATACACCCAAAACGTTAAGATCGGAGAAATTACGCTCGAATTTCGTCAACTCTCATCTCATGAAGAGATGAAAAATT GTAATCAATAATTTTTGCAA
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 606; Mature: 605
Protein sequence:
>606_residues MSAEQQPEQQPEKIHLPKTSESEQLKKIRHTTSHVMAMAVQKLFPDAQVTIGPWIESGFYYDFDSPTPFTDKDLKAIKKE MVKIIKKKLPVEREEVSREEAKKRIKALGEPYKLEILEDLEDPITLYHLGDQWWDLCAGPHVESTADLNPKAIALESVAG AYWRGDETKAQLQRIYGTAWETPEQLAEHKRRKEEALRRDHRKLGKELGLFLFSDLVGPGLPLWTPKGTLLRSQLEDFLK QEQIQRGYLGVTTPHIARVDLFKTSGHWQKYQEDMFPLMSENDADRSSEQGFVMKPMNCPFHIQIYKSELRSYRDLPMRL AEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFLKVVDLILSVFEKLQLKNFKARLSFRDPDSDKYIGSDE AWEKSQNAIRRAVETLGMEHFEGIGEAAFYGPKLDFIFQDVLDREWQLGTVQVDYNLPERFDLEFMGEDGNRQRPIMIHR APFGSLERLIGILIEEYAGVFPLWLAPEQVRLLTVNDDHMPFAQAVATDLQAAGIRVSVDQSGDRLGKKIRNAEKAKIPV MSVIGDKEVEAHSLNIRTRASGELGAIPVDEVKQKLGDAISTFSAF
Sequences:
>Translated_606_residues MSAEQQPEQQPEKIHLPKTSESEQLKKIRHTTSHVMAMAVQKLFPDAQVTIGPWIESGFYYDFDSPTPFTDKDLKAIKKE MVKIIKKKLPVEREEVSREEAKKRIKALGEPYKLEILEDLEDPITLYHLGDQWWDLCAGPHVESTADLNPKAIALESVAG AYWRGDETKAQLQRIYGTAWETPEQLAEHKRRKEEALRRDHRKLGKELGLFLFSDLVGPGLPLWTPKGTLLRSQLEDFLK QEQIQRGYLGVTTPHIARVDLFKTSGHWQKYQEDMFPLMSENDADRSSEQGFVMKPMNCPFHIQIYKSELRSYRDLPMRL AEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFLKVVDLILSVFEKLQLKNFKARLSFRDPDSDKYIGSDE AWEKSQNAIRRAVETLGMEHFEGIGEAAFYGPKLDFIFQDVLDREWQLGTVQVDYNLPERFDLEFMGEDGNRQRPIMIHR APFGSLERLIGILIEEYAGVFPLWLAPEQVRLLTVNDDHMPFAQAVATDLQAAGIRVSVDQSGDRLGKKIRNAEKAKIPV MSVIGDKEVEAHSLNIRTRASGELGAIPVDEVKQKLGDAISTFSAF >Mature_605_residues SAEQQPEQQPEKIHLPKTSESEQLKKIRHTTSHVMAMAVQKLFPDAQVTIGPWIESGFYYDFDSPTPFTDKDLKAIKKEM VKIIKKKLPVEREEVSREEAKKRIKALGEPYKLEILEDLEDPITLYHLGDQWWDLCAGPHVESTADLNPKAIALESVAGA YWRGDETKAQLQRIYGTAWETPEQLAEHKRRKEEALRRDHRKLGKELGLFLFSDLVGPGLPLWTPKGTLLRSQLEDFLKQ EQIQRGYLGVTTPHIARVDLFKTSGHWQKYQEDMFPLMSENDADRSSEQGFVMKPMNCPFHIQIYKSELRSYRDLPMRLA EFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDDEFLKVVDLILSVFEKLQLKNFKARLSFRDPDSDKYIGSDEA WEKSQNAIRRAVETLGMEHFEGIGEAAFYGPKLDFIFQDVLDREWQLGTVQVDYNLPERFDLEFMGEDGNRQRPIMIHRA PFGSLERLIGILIEEYAGVFPLWLAPEQVRLLTVNDDHMPFAQAVATDLQAAGIRVSVDQSGDRLGKKIRNAEKAKIPVM SVIGDKEVEAHSLNIRTRASGELGAIPVDEVKQKLGDAISTFSAF
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
GO:0000166: Threonyl-tRNA synthetase
GO:0004812: Threonyl-tRNA synthetase
GO:0004829: Threonyl-tRNA synthetase
GO:0005524: Threonyl-tRNA synthetase
GO:0005737: Threonyl-tRNA synthetase
GO:0006418: Threonyl-tRNA synthetase
GO:0006435: Threonyl-tRNA synthetase
GO:0016876: Threonyl-tRNA synthetase
GO:0043039: Threonyl-tRNA synthetase
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38202255, Length=595, Percent_Identity=35.7983193277311, Blast_Score=375, Evalue=1e-104, Organism=Homo sapiens, GI38570111, Length=573, Percent_Identity=35.9511343804538, Blast_Score=364, Evalue=1e-100, Organism=Homo sapiens, GI20070344, Length=581, Percent_Identity=35.6282271944923, Blast_Score=355, Evalue=9e-98, Organism=Escherichia coli, GI1788013, Length=595, Percent_Identity=40, Blast_Score=461, Evalue=1e-131, Organism=Escherichia coli, GI1786392, Length=168, Percent_Identity=25.5952380952381, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71984184, Length=594, Percent_Identity=36.026936026936, Blast_Score=394, Evalue=1e-110, Organism=Caenorhabditis elegans, GI71984192, Length=594, Percent_Identity=36.026936026936, Blast_Score=394, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6322112, Length=598, Percent_Identity=35.9531772575251, Blast_Score=366, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6322654, Length=397, Percent_Identity=34.7607052896725, Blast_Score=239, Evalue=8e-64, Organism=Drosophila melanogaster, GI24583842, Length=587, Percent_Identity=37.3083475298126, Blast_Score=399, Evalue=1e-111, Organism=Drosophila melanogaster, GI28574141, Length=587, Percent_Identity=37.3083475298126, Blast_Score=399, Evalue=1e-111, Organism=Drosophila melanogaster, GI24583839, Length=587, Percent_Identity=37.3083475298126, Blast_Score=399, Evalue=1e-111,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 69282; Mature: 69150
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEQQPEQQPEKIHLPKTSESEQLKKIRHTTSHVMAMAVQKLFPDAQVTIGPWIESGFY CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEE YDFDSPTPFTDKDLKAIKKEMVKIIKKKLPVEREEVSREEAKKRIKALGEPYKLEILEDL EECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHC EDPITLYHLGDQWWDLCAGPHVESTADLNPKAIALESVAGAYWRGDETKAQLQRIYGTAW CCCEEEEECCHHHHHHHCCCCCCCCCCCCCHHEEHHHHHCHHCCCCCHHHHHHHHHCCCC ETPEQLAEHKRRKEEALRRDHRKLGKELGLFLFSDLVGPGLPLWTPKGTLLRSQLEDFLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH QEQIQRGYLGVTTPHIARVDLFKTSGHWQKYQEDMFPLMSENDADRSSEQGFVMKPMNCP HHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCC FHIQIYKSELRSYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDD EEEEEEHHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCCEEEEEEECCCEEEECCCCCCH EFLKVVDLILSVFEKLQLKNFKARLSFRDPDSDKYIGSDEAWEKSQNAIRRAVETLGMEH HHHHHHHHHHHHHHHHHHHCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHH FEGIGEAAFYGPKLDFIFQDVLDREWQLGTVQVDYNLPERFDLEFMGEDGNRQRPIMIHR HHCCCCHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEE APFGSLERLIGILIEEYAGVFPLWLAPEQVRLLTVNDDHMPFAQAVATDLQAAGIRVSVD CCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEEC QSGDRLGKKIRNAEKAKIPVMSVIGDKEVEAHSLNIRTRASGELGAIPVDEVKQKLGDAI CCHHHHHHHHHCCHHHCCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHH STFSAF HHHHCC >Mature Secondary Structure SAEQQPEQQPEKIHLPKTSESEQLKKIRHTTSHVMAMAVQKLFPDAQVTIGPWIESGFY CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEE YDFDSPTPFTDKDLKAIKKEMVKIIKKKLPVEREEVSREEAKKRIKALGEPYKLEILEDL EECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHC EDPITLYHLGDQWWDLCAGPHVESTADLNPKAIALESVAGAYWRGDETKAQLQRIYGTAW CCCEEEEECCHHHHHHHCCCCCCCCCCCCCHHEEHHHHHCHHCCCCCHHHHHHHHHCCCC ETPEQLAEHKRRKEEALRRDHRKLGKELGLFLFSDLVGPGLPLWTPKGTLLRSQLEDFLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH QEQIQRGYLGVTTPHIARVDLFKTSGHWQKYQEDMFPLMSENDADRSSEQGFVMKPMNCP HHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCC FHIQIYKSELRSYRDLPMRLAEFGTVYRYEQSGELGGLTRVRGFTVDDSHLFVTPDQLDD EEEEEEHHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCCEEEEEEECCCEEEECCCCCCH EFLKVVDLILSVFEKLQLKNFKARLSFRDPDSDKYIGSDEAWEKSQNAIRRAVETLGMEH HHHHHHHHHHHHHHHHHHHCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHH FEGIGEAAFYGPKLDFIFQDVLDREWQLGTVQVDYNLPERFDLEFMGEDGNRQRPIMIHR HHCCCCHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEE APFGSLERLIGILIEEYAGVFPLWLAPEQVRLLTVNDDHMPFAQAVATDLQAAGIRVSVD CCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEEC QSGDRLGKKIRNAEKAKIPVMSVIGDKEVEAHSLNIRTRASGELGAIPVDEVKQKLGDAI CCHHHHHHHHHCCHHHCCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHH STFSAF HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]