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The map label for this gene is yutI [H]

Identifier: 158334696

GI number: 158334696

Start: 1513067

End: 1513309

Strand: Reverse

Name: yutI [H]

Synonym: AM1_1529

Alternate gene names: 158334696

Gene position: 1513309-1513067 (Counterclockwise)

Preceding gene: 158334697

Following gene: 158334694

Centisome position: 23.27

GC content: 45.68

Gene sequence:

>243_bases
ATGTCACAAACGTTAGAACTTAATCCCGAAAACGTCGAAACAGTATTAGATGAGTTGCGCCCCTACCTAATGGCAGACGG
TGGCAATGTTGAGTTGGTTGAAGTCGAAGGTCCTGTAGTGAAGCTACGTCTGCAAGGAGCCTGTGGATCTTGCCCCAGTT
CTGCCATGACGTTAAAGATGGGGATTGAGCGTAAATTAAGAGACACCATTCCTGAAATTGCTGAGGTTGAGCAAGTCTTT
TAA

Upstream 100 bases:

>100_bases
TGCAGGGACTCTCTGCAGGCAGTTAGAGATGGATATCGTTCAGGCGTAAATGTCTCTACTGCAATCGCTACAATATAGAT
CAGCACACCAAGGTTTAGTC

Downstream 100 bases:

>100_bases
ATCACCGCAAATTTGAAACGACCCGGGGCCTGTTACATTAACAGGCCCTTTTTGATGATTAAGAGGCTGGGCCAACGGCT
TCAATGGCAGCTTCTAGTGC

Product: NifU domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MSQTLELNPENVETVLDELRPYLMADGGNVELVEVEGPVVKLRLQGACGSCPSSAMTLKMGIERKLRDTIPEIAEVEQVF

Sequences:

>Translated_80_residues
MSQTLELNPENVETVLDELRPYLMADGGNVELVEVEGPVVKLRLQGACGSCPSSAMTLKMGIERKLRDTIPEIAEVEQVF
>Mature_79_residues
SQTLELNPENVETVLDELRPYLMADGGNVELVEVEGPVVKLRLQGACGSCPSSAMTLKMGIERKLRDTIPEIAEVEQVF

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI50593021, Length=69, Percent_Identity=47.8260869565217, Blast_Score=63, Evalue=4e-11,
Organism=Homo sapiens, GI50593025, Length=69, Percent_Identity=47.8260869565217, Blast_Score=63, Evalue=4e-11,
Organism=Homo sapiens, GI50593023, Length=61, Percent_Identity=50.8196721311475, Blast_Score=63, Evalue=5e-11,
Organism=Homo sapiens, GI50593019, Length=61, Percent_Identity=50.8196721311475, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17541876, Length=61, Percent_Identity=47.5409836065574, Blast_Score=63, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45551492, Length=70, Percent_Identity=48.5714285714286, Blast_Score=72, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24643765, Length=70, Percent_Identity=48.5714285714286, Blast_Score=72, Evalue=8e-14,
Organism=Drosophila melanogaster, GI45556188, Length=70, Percent_Identity=48.5714285714286, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 8789; Mature: 8658

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTLELNPENVETVLDELRPYLMADGGNVELVEVEGPVVKLRLQGACGSCPSSAMTLKM
CCCCCCCCCCHHHHHHHHHCCEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEC
GIERKLRDTIPEIAEVEQVF
CCHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
SQTLELNPENVETVLDELRPYLMADGGNVELVEVEGPVVKLRLQGACGSCPSSAMTLKM
CCCCCCCCCHHHHHHHHHCCEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEC
GIERKLRDTIPEIAEVEQVF
CCHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]