Click here to switch to the map view.

The map label for this gene is 158334624

Identifier: 158334624

GI number: 158334624

Start: 1445528

End: 1446202

Strand: Reverse

Name: 158334624

Synonym: AM1_1454

Alternate gene names: NA

Gene position: 1446202-1445528 (Counterclockwise)

Preceding gene: 158334627

Following gene: 158334623

Centisome position: 22.24

GC content: 47.26

Gene sequence:

>675_bases
ATGAAAACCAAGTGTTTATCAATTATTAGCCTATTTCTCCTGGCTACTACTACCAGTATTGCTTCCGCTCAAACCAGTGG
CTCTGAAGCTCCTGCTGAATTAAGCCCAGCAATCATGAAAGTGCTCTGTAAGCACTTTCCCCTTAACTCTCGGTGTACCG
GTGAGGCTGCTTCCGCTGCCGCTGAGGAAACTGTCCCTGCTGAAGCAATGGATTCTGAAGCACCTAGTGCAGAAATGGAA
GACTCCTCTGACGCTAGTGCAGAAGGCACCATTGTTGAAGTTGCCAGTGCGAATGACTCCTTTAAGACCTTAGTCGCAGC
TATCAAAGCTGCAGAATTAGCAGAAACCCTATCAGGCGAAGGACCCTTTACCGTCTTTGCACCTACAGAAGAAGCCTTTG
CTGCTCTACCTGCTGGCACAGTGGATACTCTGCTTAAGCCTGAGAACAAAGATAAGTTGGTTAAAATTCTGACTTATCAT
GTTGTACCGGCAAAAGCTGTCTCGACCGATTTAGAGTCTGGAGATGTGTCAACCGTTGCAGGTGCACCCGTAAAAGTGAC
CGTTGAATCCGGCGCAGTCACAGTTAACAATGCTAATGTCGTTCAGGCTGATGTGATGGGAAGCAATGGTGTGATTCATG
TGATTGATAAGGTTTTGCTCCCTCCCGATCTCTAA

Upstream 100 bases:

>100_bases
TTCATAAAGTTTTGTAGAGGATCATCGTGATCCCTTACTTTTCAGCTTGGTCTTCTAATGATCATTGCTGTTCTCGTTCA
GTAGCGTTTTGTGTGTCCAA

Downstream 100 bases:

>100_bases
AGTGAGTCCTGGATTCAATATCTAACCCTCGAATCAAATCGTTAATTGTAAAAAGGCTGGGATCTAATCCTGGCCTTTTT
GGTTGAAATTTTCTGGATTG

Product: fasciclin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKTKCLSIISLFLLATTTSIASAQTSGSEAPAELSPAIMKVLCKHFPLNSRCTGEAASAAAEETVPAEAMDSEAPSAEME
DSSDASAEGTIVEVASANDSFKTLVAAIKAAELAETLSGEGPFTVFAPTEEAFAALPAGTVDTLLKPENKDKLVKILTYH
VVPAKAVSTDLESGDVSTVAGAPVKVTVESGAVTVNNANVVQADVMGSNGVIHVIDKVLLPPDL

Sequences:

>Translated_224_residues
MKTKCLSIISLFLLATTTSIASAQTSGSEAPAELSPAIMKVLCKHFPLNSRCTGEAASAAAEETVPAEAMDSEAPSAEME
DSSDASAEGTIVEVASANDSFKTLVAAIKAAELAETLSGEGPFTVFAPTEEAFAALPAGTVDTLLKPENKDKLVKILTYH
VVPAKAVSTDLESGDVSTVAGAPVKVTVESGAVTVNNANVVQADVMGSNGVIHVIDKVLLPPDL
>Mature_224_residues
MKTKCLSIISLFLLATTTSIASAQTSGSEAPAELSPAIMKVLCKHFPLNSRCTGEAASAAAEETVPAEAMDSEAPSAEME
DSSDASAEGTIVEVASANDSFKTLVAAIKAAELAETLSGEGPFTVFAPTEEAFAALPAGTVDTLLKPENKDKLVKILTYH
VVPAKAVSTDLESGDVSTVAGAPVKVTVESGAVTVNNANVVQADVMGSNGVIHVIDKVLLPPDL

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=135, Percent_Identity=40.7407407407407, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI209862911, Length=140, Percent_Identity=30.7142857142857, Blast_Score=78, Evalue=5e-15,
Organism=Homo sapiens, GI209863034, Length=140, Percent_Identity=30.7142857142857, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI209863011, Length=140, Percent_Identity=30.7142857142857, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI209862907, Length=140, Percent_Identity=30.7142857142857, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI61743980, Length=160, Percent_Identity=27.5, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI61743978, Length=157, Percent_Identity=29.9363057324841, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 22871; Mature: 22871

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKCLSIISLFLLATTTSIASAQTSGSEAPAELSPAIMKVLCKHFPLNSRCTGEAASAA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH
AEETVPAEAMDSEAPSAEMEDSSDASAEGTIVEVASANDSFKTLVAAIKAAELAETLSGE
HHHCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
GPFTVFAPTEEAFAALPAGTVDTLLKPENKDKLVKILTYHVVPAKAVSTDLESGDVSTVA
CCEEEECCCHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEC
GAPVKVTVESGAVTVNNANVVQADVMGSNGVIHVIDKVLLPPDL
CCCEEEEEECCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTKCLSIISLFLLATTTSIASAQTSGSEAPAELSPAIMKVLCKHFPLNSRCTGEAASAA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH
AEETVPAEAMDSEAPSAEMEDSSDASAEGTIVEVASANDSFKTLVAAIKAAELAETLSGE
HHHCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
GPFTVFAPTEEAFAALPAGTVDTLLKPENKDKLVKILTYHVVPAKAVSTDLESGDVSTVA
CCEEEECCCHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEC
GAPVKVTVESGAVTVNNANVVQADVMGSNGVIHVIDKVLLPPDL
CCCEEEEEECCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]