Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158334516

Identifier: 158334516

GI number: 158334516

Start: 1321591

End: 1322049

Strand: Reverse

Name: 158334516

Synonym: AM1_1340

Alternate gene names: NA

Gene position: 1322049-1321591 (Counterclockwise)

Preceding gene: 158334517

Following gene: 158334513

Centisome position: 20.33

GC content: 52.51

Gene sequence:

>459_bases
GTGCAAACCATTGCCGTCACTGGCCCCCGCCAACTGACCGCTCATCAGCGGACCAAGGCTTTGAGTGACTTACAGAGATT
GAAGATTTATCCAAACTGGCTAGTTGGGGATGCTTCTGGTTTAGATAAACTGGCTCGATCTATAGGTCAAACCCATCATC
TGAATTTACAGATCTATGAGAAACGATCTGAGTTACCCCACCGCGCCCAGGGGGTAGAACGCAGCACTCGCATGATTAAG
GCACTCGCAACAGCAGTGGGTACACTCCACGCTTGGCCGAACAAGCCTGCCCCACACCAGTTGATACCGAGTCGAAGTTG
GCCCACAGGAGCTGCTGGATCAGGAACTTGGGGGACAATTGCCCTAGCGGTTGGTCTGGGAATCCCAGTAAAACTGCACC
CACTGGCAGAGATCGATATCCCATCATGGTTACAGAGTGAGCAGCTGACACTGCTTTAG

Upstream 100 bases:

>100_bases
CAACAGAAGAAGAATCCGTGAGATGTGCTGCCAGTAGTTTGTTTATTGCGGCCAAGCAGAAATTTAGCATCTAGTAACAA
CAGCGGGAGGTCAAGACACT

Downstream 100 bases:

>100_bases
ATGTGAAATCATTGATACACAACCCAAATCCCGTAAACCCTTACCCTCTCGCTCTTCTCCCACTTTCCCTCTTAACTCAG
CGAATGGAGCGCCCTAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MQTIAVTGPRQLTAHQRTKALSDLQRLKIYPNWLVGDASGLDKLARSIGQTHHLNLQIYEKRSELPHRAQGVERSTRMIK
ALATAVGTLHAWPNKPAPHQLIPSRSWPTGAAGSGTWGTIALAVGLGIPVKLHPLAEIDIPSWLQSEQLTLL

Sequences:

>Translated_152_residues
MQTIAVTGPRQLTAHQRTKALSDLQRLKIYPNWLVGDASGLDKLARSIGQTHHLNLQIYEKRSELPHRAQGVERSTRMIK
ALATAVGTLHAWPNKPAPHQLIPSRSWPTGAAGSGTWGTIALAVGLGIPVKLHPLAEIDIPSWLQSEQLTLL
>Mature_152_residues
MQTIAVTGPRQLTAHQRTKALSDLQRLKIYPNWLVGDASGLDKLARSIGQTHHLNLQIYEKRSELPHRAQGVERSTRMIK
ALATAVGTLHAWPNKPAPHQLIPSRSWPTGAAGSGTWGTIALAVGLGIPVKLHPLAEIDIPSWLQSEQLTLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16607; Mature: 16607

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIAVTGPRQLTAHQRTKALSDLQRLKIYPNWLVGDASGLDKLARSIGQTHHLNLQIYE
CCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCEECEEEEEE
KRSELPHRAQGVERSTRMIKALATAVGTLHAWPNKPAPHQLIPSRSWPTGAAGSGTWGTI
CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
ALAVGLGIPVKLHPLAEIDIPSWLQSEQLTLL
HHHHHCCCCEEECCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MQTIAVTGPRQLTAHQRTKALSDLQRLKIYPNWLVGDASGLDKLARSIGQTHHLNLQIYE
CCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCEECEEEEEE
KRSELPHRAQGVERSTRMIKALATAVGTLHAWPNKPAPHQLIPSRSWPTGAAGSGTWGTI
CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
ALAVGLGIPVKLHPLAEIDIPSWLQSEQLTLL
HHHHHCCCCEEECCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA