Click here to switch to the map view.

The map label for this gene is ycjY [H]

Identifier: 158334503

GI number: 158334503

Start: 1310816

End: 1311781

Strand: Direct

Name: ycjY [H]

Synonym: AM1_1327

Alternate gene names: 158334503

Gene position: 1310816-1311781 (Clockwise)

Preceding gene: 158334502

Following gene: 158334504

Centisome position: 20.15

GC content: 51.04

Gene sequence:

>966_bases
GTGAATCAGCGGTTGATCCAAAGATTATGTCAACTCAAAACTGAAGCTTTTACTATGACCCTAACCATCATCAACCTCCA
AAATCCCCCTGGGATAAGTGGCGTTTATGCCGAATCTGTTGCGTTTCCCTCCAAGGGTGTCACCCTGAAAGGAACGCTTT
ACAAACCCGCAGAAATTAATGGCCTTTTAGCGGCTGTGATTGTTACCGGTGCCTGGACAACCGTTAAAGAGCAAATGGCT
GGAACCTACGCTAGAGAACTAGCCGCCCGCGGATTGGCCGCCCTAGCATTTGACTTCACTGGTTGGGGCGAGTCTGGGGG
GGAGCCTCGCTATGTCGAAGATCCAGCCACGAAGACTGCTGATATTGATGCAGCAGTGGATTTTCTCGCTGAGTGTAATG
ACGTGGACCAGTCGCATCTATATGGTTTGGGCATTTGTGCATCATCTGGCTACATGGCAGCCGTCGCTGCCGACAACGAC
AAGATGAAAAAACTGGCCCTAGTGGCTCCTTGGCTTCATAACCCCAAAATGGCAGCAGACGTTTACGGTGGTCCTGAAAC
GGTGGCCTCATTGATTGCTGCTAGCGAAGCTGGAAACGCAGATCTGACTATCCTAACTGCCGCTAGTACCACAGATGACA
ATGCCCCCATGTATCAAGCCCCCTACTACACCGAAACAAATCGAGGTCTAATCCCCGCTTACGACAACAAGTTCAGTATT
TTGACCTGGAAGCCCTGGCTCACCTATGACGCTCAAGCCTCTGCCAATCACCTATCTAAGCCGACGCTGATGGTGGGGTC
ACCTGCGATCGCACTTCCCGCTGGTGCAGAAGCTTACGAGCAGCGTACCCAAGCTCCCCTGCAAAAACTCTGGCTGGGCG
ATGATGTCACTCAATTTGATTTTTATGATCGTGCGGATGTTGTTACAGACGCCTCTAACGCTGTGGCAGAGTTCTTTCAA
GGATAA

Upstream 100 bases:

>100_bases
ATGCTCGCCATCTTGAAGCCATGGCTGCAATCGTGATTAGTCGGCTCTTTGGGGGTGTCGATCCCCATTCTGTCTTCAAC
TGGATTACCCCCAACCCGGA

Downstream 100 bases:

>100_bases
ATAGACACTAATAAGTACATCCCCAGAATGAGGTTATTCTGATGACCCAAGATGATCTCGAGGCATTTGCGAGGAGATTT
TTCACAGCGGTTGATGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MNQRLIQRLCQLKTEAFTMTLTIINLQNPPGISGVYAESVAFPSKGVTLKGTLYKPAEINGLLAAVIVTGAWTTVKEQMA
GTYARELAARGLAALAFDFTGWGESGGEPRYVEDPATKTADIDAAVDFLAECNDVDQSHLYGLGICASSGYMAAVAADND
KMKKLALVAPWLHNPKMAADVYGGPETVASLIAASEAGNADLTILTAASTTDDNAPMYQAPYYTETNRGLIPAYDNKFSI
LTWKPWLTYDAQASANHLSKPTLMVGSPAIALPAGAEAYEQRTQAPLQKLWLGDDVTQFDFYDRADVVTDASNAVAEFFQ
G

Sequences:

>Translated_321_residues
MNQRLIQRLCQLKTEAFTMTLTIINLQNPPGISGVYAESVAFPSKGVTLKGTLYKPAEINGLLAAVIVTGAWTTVKEQMA
GTYARELAARGLAALAFDFTGWGESGGEPRYVEDPATKTADIDAAVDFLAECNDVDQSHLYGLGICASSGYMAAVAADND
KMKKLALVAPWLHNPKMAADVYGGPETVASLIAASEAGNADLTILTAASTTDDNAPMYQAPYYTETNRGLIPAYDNKFSI
LTWKPWLTYDAQASANHLSKPTLMVGSPAIALPAGAEAYEQRTQAPLQKLWLGDDVTQFDFYDRADVVTDASNAVAEFFQ
G
>Mature_321_residues
MNQRLIQRLCQLKTEAFTMTLTIINLQNPPGISGVYAESVAFPSKGVTLKGTLYKPAEINGLLAAVIVTGAWTTVKEQMA
GTYARELAARGLAALAFDFTGWGESGGEPRYVEDPATKTADIDAAVDFLAECNDVDQSHLYGLGICASSGYMAAVAADND
KMKKLALVAPWLHNPKMAADVYGGPETVASLIAASEAGNADLTILTAASTTDDNAPMYQAPYYTETNRGLIPAYDNKFSI
LTWKPWLTYDAQASANHLSKPTLMVGSPAIALPAGAEAYEQRTQAPLQKLWLGDDVTQFDFYDRADVVTDASNAVAEFFQ
G

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI221142683, Length=296, Percent_Identity=28.7162162162162, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 34382; Mature: 34382

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRLIQRLCQLKTEAFTMTLTIINLQNPPGISGVYAESVAFPSKGVTLKGTLYKPAEIN
CCHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCEEHHHCCCCCCCEEEEEEEECCCHHH
GLLAAVIVTGAWTTVKEQMAGTYARELAARGLAALAFDFTGWGESGGEPRYVEDPATKTA
HHEEEHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEECCCCCCCC
DIDAAVDFLAECNDVDQSHLYGLGICASSGYMAAVAADNDKMKKLALVAPWLHNPKMAAD
CHHHHHHHHHHCCCCCCHHEEEEEEEECCCEEEEEECCCHHHHEEEEECCCCCCCCEEEE
VYGGPETVASLIAASEAGNADLTILTAASTTDDNAPMYQAPYYTETNRGLIPAYDNKFSI
CCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEECCCEECCCCCEEECCCCCEEE
LTWKPWLTYDAQASANHLSKPTLMVGSPAIALPAGAEAYEQRTQAPLQKLWLGDDVTQFD
EEECCCEEECCCCCCCCCCCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC
FYDRADVVTDASNAVAEFFQG
CCCCCHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MNQRLIQRLCQLKTEAFTMTLTIINLQNPPGISGVYAESVAFPSKGVTLKGTLYKPAEIN
CCHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCEEHHHCCCCCCCEEEEEEEECCCHHH
GLLAAVIVTGAWTTVKEQMAGTYARELAARGLAALAFDFTGWGESGGEPRYVEDPATKTA
HHEEEHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEECCCCCCCC
DIDAAVDFLAECNDVDQSHLYGLGICASSGYMAAVAADNDKMKKLALVAPWLHNPKMAAD
CHHHHHHHHHHCCCCCCHHEEEEEEEECCCEEEEEECCCHHHHEEEEECCCCCCCCEEEE
VYGGPETVASLIAASEAGNADLTILTAASTTDDNAPMYQAPYYTETNRGLIPAYDNKFSI
CCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEECCCEECCCCCEEECCCCCEEE
LTWKPWLTYDAQASANHLSKPTLMVGSPAIALPAGAEAYEQRTQAPLQKLWLGDDVTQFD
EEECCCEEECCCCCCCCCCCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC
FYDRADVVTDASNAVAEFFQG
CCCCCHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]