| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is mgsA [C]
Identifier: 158334485
GI number: 158334485
Start: 1294761
End: 1296053
Strand: Direct
Name: mgsA [C]
Synonym: AM1_1309
Alternate gene names: 158334485
Gene position: 1294761-1296053 (Clockwise)
Preceding gene: 158334484
Following gene: 158334487
Centisome position: 19.91
GC content: 46.33
Gene sequence:
>1293_bases ATGCCTAATTCTATTGCTTTGATTGCCCATGAAAGCAAGAAAAACGACATCGTTACTCTTGTCCAGCGGTATCATTCGCT TCTTAACCGCTATCTTATTGTCGCTACTCCAGATACTGGAAAATGGATTCAAGATGCGACTAACCTTACAGTTGAGACTG TAGTATCAGAAGCAGATGGTGGTCTGTTGCAAATCGCGGCCCGACTAGTATCAAGCGAAGTCGTAGGTGTGATTTTCCTG ATGGATACGATCAACGTTCCATCTCAGTTACCCGACGTTCAAGCTCTATTGAGGGTTTGTAACCGTTATGAGGTGCCCTT AGCGACTAACATTGCAACGGCTGAATTGGCGATTCAGGGGGTCGCCAAGCGTCGGGACGCTTATTTGATTTTTAATCCCA TAGCAGGACAAGGTAATCCAGATCGCGACTTGGCTCTGATTCAGAAAATTCTGGAACCACAGATGAATCTCCACATTATC TTGACGCAACCAGATATTGATCCAGTAGAGCAAGCTAAGGAAGCAATTACCGCAATCCAATCTGCTCAATCTGAGGACAG CACTGCTTGTATTATTGCTTCTGGGGGAGATGGAACTGTGTCAGCCATTGCAGGTACCACTCTTGAAACTGGTATTCCTG TTGGCATTATTCCCAGAGGAACCGCCAACGCCTTTGCCGTGGCTTTAGGATTACCTACAGATCTCAAGCGGGCCTGTGAA ACGATTGCAGCAGGTAACACGCGTATGGTGGATGCAGCTTACTGTAACGATATCCCAATGGTGCTTTTGGCCGGAGTGGG GTTTGAAGCTCAAATGGTCAACAACGCCAGCCGAGAATTAAAAAATCGCATAGGCACGCTTGCCTACGTCTTGTCTGCCG CCCAGCAATTTTTTGCCCAAAAGGATTTCAATGCCACGGTTGAGTTAGATGGTCAGGTTTTGGAATTTAAGACTGGAGCG GTGACCATTGCCAATGCAGCCCCACCAAGCTCAATTAGTGCCCAGGGGTTTGGAGCTGTAATTCCTGATGATGGGTTGCT AGAGGTTACCATTCCAACATCCAAAACTCTACTACAGGACATAAATACTTCTGCGACGCTGCTTGCCTCAGCTTTAGTGA AGACTCAATTTGAAGATAGAAATCTAGTCTGTTTGCGGACCCATCAACTTAAGGTAACGACTGATCCACCGCAAACACTC GTGGTAGATGGTGAAGTTTTGGAAGCTAATCCCATAGAATTTATCTGCGTCCCCAAAGGGCTAACAGTGTTCTCACCTCT ATTAACTACTTAG
Upstream 100 bases:
>100_bases ATCGTTGAATTTTAATAATACTCCTCAACAGATTGAGTCACGACAAGCCTTCGCTAAAGACAAATTAACTGCTCTTTAAT TTAGACAAGATTAGTTGTCT
Downstream 100 bases:
>100_bases GTATCCCTCTTTTGTCACTTCAGATAGATGAAATTTGAAACAACGTAATTGCGTTTGGAGTGAACCCAATCATCAGGCCA TGCACTAACGTAATTTCAAG
Product: putative lipid kinase
Products: Methylglyoxal; Phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MPNSIALIAHESKKNDIVTLVQRYHSLLNRYLIVATPDTGKWIQDATNLTVETVVSEADGGLLQIAARLVSSEVVGVIFL MDTINVPSQLPDVQALLRVCNRYEVPLATNIATAELAIQGVAKRRDAYLIFNPIAGQGNPDRDLALIQKILEPQMNLHII LTQPDIDPVEQAKEAITAIQSAQSEDSTACIIASGGDGTVSAIAGTTLETGIPVGIIPRGTANAFAVALGLPTDLKRACE TIAAGNTRMVDAAYCNDIPMVLLAGVGFEAQMVNNASRELKNRIGTLAYVLSAAQQFFAQKDFNATVELDGQVLEFKTGA VTIANAAPPSSISAQGFGAVIPDDGLLEVTIPTSKTLLQDINTSATLLASALVKTQFEDRNLVCLRTHQLKVTTDPPQTL VVDGEVLEANPIEFICVPKGLTVFSPLLTT
Sequences:
>Translated_430_residues MPNSIALIAHESKKNDIVTLVQRYHSLLNRYLIVATPDTGKWIQDATNLTVETVVSEADGGLLQIAARLVSSEVVGVIFL MDTINVPSQLPDVQALLRVCNRYEVPLATNIATAELAIQGVAKRRDAYLIFNPIAGQGNPDRDLALIQKILEPQMNLHII LTQPDIDPVEQAKEAITAIQSAQSEDSTACIIASGGDGTVSAIAGTTLETGIPVGIIPRGTANAFAVALGLPTDLKRACE TIAAGNTRMVDAAYCNDIPMVLLAGVGFEAQMVNNASRELKNRIGTLAYVLSAAQQFFAQKDFNATVELDGQVLEFKTGA VTIANAAPPSSISAQGFGAVIPDDGLLEVTIPTSKTLLQDINTSATLLASALVKTQFEDRNLVCLRTHQLKVTTDPPQTL VVDGEVLEANPIEFICVPKGLTVFSPLLTT >Mature_429_residues PNSIALIAHESKKNDIVTLVQRYHSLLNRYLIVATPDTGKWIQDATNLTVETVVSEADGGLLQIAARLVSSEVVGVIFLM DTINVPSQLPDVQALLRVCNRYEVPLATNIATAELAIQGVAKRRDAYLIFNPIAGQGNPDRDLALIQKILEPQMNLHIIL TQPDIDPVEQAKEAITAIQSAQSEDSTACIIASGGDGTVSAIAGTTLETGIPVGIIPRGTANAFAVALGLPTDLKRACET IAAGNTRMVDAAYCNDIPMVLLAGVGFEAQMVNNASRELKNRIGTLAYVLSAAQQFFAQKDFNATVELDGQVLEFKTGAV TIANAAPPSSISAQGFGAVIPDDGLLEVTIPTSKTLLQDINTSATLLASALVKTQFEDRNLVCLRTHQLKVTTDPPQTLV VDGEVLEANPIEFICVPKGLTVFSPLLTT
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI87081809, Length=117, Percent_Identity=36.7521367521368, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1788402, Length=310, Percent_Identity=23.5483870967742, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001206 - InterPro: IPR004363 - InterPro: IPR018148 - InterPro: IPR011607 [H]
Pfam domain/function: PF00781 DAGK_cat; PF02142 MGS [H]
EC number: 4.2.3.3 [C]
Molecular weight: Translated: 45717; Mature: 45586
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSIALIAHESKKNDIVTLVQRYHSLLNRYLIVATPDTGKWIQDATNLTVETVVSEADG CCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCEEEEHHHHCCC GLLQIAARLVSSEVVGVIFLMDTINVPSQLPDVQALLRVCNRYEVPLATNIATAELAIQG CHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEECCCHHHHHHHHH VAKRRDAYLIFNPIAGQGNPDRDLALIQKILEPQMNLHIILTQPDIDPVEQAKEAITAIQ HHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH SAQSEDSTACIIASGGDGTVSAIAGTTLETGIPVGIIPRGTANAFAVALGLPTDLKRACE HCCCCCCCEEEEEECCCCEEEEEECCCHHCCCCEEEECCCCCCEEEEEECCCHHHHHHHH TIAAGNTRMVDAAYCNDIPMVLLAGVGFEAQMVNNASRELKNRIGTLAYVLSAAQQFFAQ HHHCCCCEEEEHHHHCCCCEEEHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDFNATVELDGQVLEFKTGAVTIANAAPPSSISAQGFGAVIPDDGLLEVTIPTSKTLLQD CCCCEEEEECCEEEEEECCEEEEECCCCCCCCCCCCCCEECCCCCEEEEEECCHHHHHHH INTSATLLASALVKTQFEDRNLVCLRTHQLKVTTDPPQTLVVDGEVLEANPIEFICVPKG CCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEECCEEEECCCEEEEEECCC LTVFSPLLTT CHHHHHHHCC >Mature Secondary Structure PNSIALIAHESKKNDIVTLVQRYHSLLNRYLIVATPDTGKWIQDATNLTVETVVSEADG CCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCEEEEHHHHCCC GLLQIAARLVSSEVVGVIFLMDTINVPSQLPDVQALLRVCNRYEVPLATNIATAELAIQG CHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEECCCHHHHHHHHH VAKRRDAYLIFNPIAGQGNPDRDLALIQKILEPQMNLHIILTQPDIDPVEQAKEAITAIQ HHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH SAQSEDSTACIIASGGDGTVSAIAGTTLETGIPVGIIPRGTANAFAVALGLPTDLKRACE HCCCCCCCEEEEEECCCCEEEEEECCCHHCCCCEEEECCCCCCEEEEEECCCHHHHHHHH TIAAGNTRMVDAAYCNDIPMVLLAGVGFEAQMVNNASRELKNRIGTLAYVLSAAQQFFAQ HHHCCCCEEEEHHHHCCCCEEEHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDFNATVELDGQVLEFKTGAVTIANAAPPSSISAQGFGAVIPDDGLLEVTIPTSKTLLQD CCCCEEEEECCEEEEEECCEEEEECCCCCCCCCCCCCCEECCCCCEEEEEECCHHHHHHH INTSATLLASALVKTQFEDRNLVCLRTHQLKVTTDPPQTLVVDGEVLEANPIEFICVPKG CCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEECCEEEECCCEEEEEECCC LTVFSPLLTT CHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): 13200 [C]
Specific activity: NA
Km value (mM): 0.5 {dihydroxyacetone} 0.47 {dihydroxyacetone} 0.2 {dihydroxyacetone} [C]
Substrates: Dihydroxyacetone phosphate [C]
Specific reaction: Dihydroxyacetone phosphate --> Methylglyoxal + Phosphate [C]
General reaction: elimination (C-O bond cleavage [C]
Inhibitor: 2-phosphoglycerate; 3-phosphoglycerate; arsenate; diphosphate; phosphate; phosphoenolpyruvate [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]