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The map label for this gene is sufB [C]

Identifier: 158334403

GI number: 158334403

Start: 1204069

End: 1205505

Strand: Reverse

Name: sufB [C]

Synonym: AM1_1224

Alternate gene names: 158334403

Gene position: 1205505-1204069 (Counterclockwise)

Preceding gene: 158334404

Following gene: 158334402

Centisome position: 18.54

GC content: 50.94

Gene sequence:

>1437_bases
ATGACCGCAACCGTTGAAAATCTGGTTAATCAACCCTACAAATACGGCTTTGTCACGGATATTGAAGTTGAAACCATTCC
TAAGGGACTGAGCGAAGACGTGATTCGCTTGATCTCGGCCAAAAAGGAAGAACCCGCTTTTATGCTGGAGTTTCGGCTGA
AGGCCTATCGGCAGTGGCTCAAGATGAAGGAGCCCACTTGGCCCCATGTTGACTATCCGGCCATCGATTATCAAGACATC
ACCTACTACTCCGCTCCTAAAGAGCAAGAGAAGAAAAAGAGTTTGGATGATGTGGATCCGGCGCTGCTCGAAACCTTCGA
TAAACTTGGCATTCCTCTGTCGGAGCAGAAGCGCCTCAGCAATGTGGCTGTGGATGCGGTGTTTGATAGCGTTTCGGTTG
CAACCACCTTTAAAGAGCAGCTAGCCAAAGAAGGCGTGATCTTCTGCTCCATTTCTGAAGCCCTCAAGGACTTTCCCGAG
CTAGTGGAGAAGTACCTGGGAAGCGTGGTGCCCATCAACGACAATTTTTTCTCGGCCCTCAACTCGGCAGTATTTAGTGA
TGGCTCCTTCGTCTATATTCCTAAGGGGGTTAAATGCCCCATGGAACTGTCCACCTATTTCCGGATTAATACCGAAGGGG
CGGGACAGTTTGAACGCACTCTGATTATTGCTGAAGAAGGCAGCCAGGTCAGCTATCTAGAAGGTTGTACTGCCCCCATG
TTCGATACCAATCAGCTCCACGCGGCGGTGGTGGAACTGGTGGCTTTAGATGACGCCGATATCAAATATTCCACAGTCCA
GAACTGGTATGCAGGCGACGAGAACGGCAAAGGCGGTATCTATAACTTTGTGACCAAACGGGGCCTATGCGCGGGTAAGA
ACTCCAAGATTTCCTGGACCCAGGTAGAGACGGGGTCAGCGATTACCTGGAAGTATCCCAGCTGCGTGTTGGTGGGCGAT
AACTCCGTGGGAGAGTTTTACTCCGTGGCCTTGACCAACAATAAACAGCAGGCGGACACGGGCACCAAGATGATCCATGT
GGGCAAAAACACCCGCAGCACGATTATTTCCAAGGGCATTTCCGCAGGCCGCTCTCAAAATAGCTATCGCGGCTTGGTAC
GAATGGGGCCGAAGGCCGATGGCTCTCGCAATTACTCCCAGTGTGATTCCATGCTGATTGGCAGTGATGCCGAGGCCAAT
ACCTTCCCCTATATCCAGGTGCAAAATAACCAAACGAAAGTGGAGCATGAAGCCTCCACCTCCAAGATTGGCGAAGACCA
GCTCTTCTACTTTGCCCAGCGGGGGATTTCCGTAGAAGATGCGGTGTCGATGATGATTAGCGGCTTCTGTCAGGATGTGT
TTAATCAACTGCCGATGGAATTTGCCGTGGAAGCCGATCGGCTTTTAAGCCTGAAGTTAGAAGGAAGTGTGGGATAA

Upstream 100 bases:

>100_bases
AACATAAATGTTGCTAAAGTACTCTATGATGGTGTTGAACAACAAAGTTGTTGTTTTATGATTATACACGCGCGCCACTT
GCTCTGAGAGAACACCCCCC

Downstream 100 bases:

>100_bases
GGTTTCTCACCAAAGCAGTACTAGACGTTAGACGCAGTTAGAGGTTCAGGCGTGATTATTGACAATAGCGACGTGATTCT
GTCGGTCCGTAATTTGACGG

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MTATVENLVNQPYKYGFVTDIEVETIPKGLSEDVIRLISAKKEEPAFMLEFRLKAYRQWLKMKEPTWPHVDYPAIDYQDI
TYYSAPKEQEKKKSLDDVDPALLETFDKLGIPLSEQKRLSNVAVDAVFDSVSVATTFKEQLAKEGVIFCSISEALKDFPE
LVEKYLGSVVPINDNFFSALNSAVFSDGSFVYIPKGVKCPMELSTYFRINTEGAGQFERTLIIAEEGSQVSYLEGCTAPM
FDTNQLHAAVVELVALDDADIKYSTVQNWYAGDENGKGGIYNFVTKRGLCAGKNSKISWTQVETGSAITWKYPSCVLVGD
NSVGEFYSVALTNNKQQADTGTKMIHVGKNTRSTIISKGISAGRSQNSYRGLVRMGPKADGSRNYSQCDSMLIGSDAEAN
TFPYIQVQNNQTKVEHEASTSKIGEDQLFYFAQRGISVEDAVSMMISGFCQDVFNQLPMEFAVEADRLLSLKLEGSVG

Sequences:

>Translated_478_residues
MTATVENLVNQPYKYGFVTDIEVETIPKGLSEDVIRLISAKKEEPAFMLEFRLKAYRQWLKMKEPTWPHVDYPAIDYQDI
TYYSAPKEQEKKKSLDDVDPALLETFDKLGIPLSEQKRLSNVAVDAVFDSVSVATTFKEQLAKEGVIFCSISEALKDFPE
LVEKYLGSVVPINDNFFSALNSAVFSDGSFVYIPKGVKCPMELSTYFRINTEGAGQFERTLIIAEEGSQVSYLEGCTAPM
FDTNQLHAAVVELVALDDADIKYSTVQNWYAGDENGKGGIYNFVTKRGLCAGKNSKISWTQVETGSAITWKYPSCVLVGD
NSVGEFYSVALTNNKQQADTGTKMIHVGKNTRSTIISKGISAGRSQNSYRGLVRMGPKADGSRNYSQCDSMLIGSDAEAN
TFPYIQVQNNQTKVEHEASTSKIGEDQLFYFAQRGISVEDAVSMMISGFCQDVFNQLPMEFAVEADRLLSLKLEGSVG
>Mature_477_residues
TATVENLVNQPYKYGFVTDIEVETIPKGLSEDVIRLISAKKEEPAFMLEFRLKAYRQWLKMKEPTWPHVDYPAIDYQDIT
YYSAPKEQEKKKSLDDVDPALLETFDKLGIPLSEQKRLSNVAVDAVFDSVSVATTFKEQLAKEGVIFCSISEALKDFPEL
VEKYLGSVVPINDNFFSALNSAVFSDGSFVYIPKGVKCPMELSTYFRINTEGAGQFERTLIIAEEGSQVSYLEGCTAPMF
DTNQLHAAVVELVALDDADIKYSTVQNWYAGDENGKGGIYNFVTKRGLCAGKNSKISWTQVETGSAITWKYPSCVLVGDN
SVGEFYSVALTNNKQQADTGTKMIHVGKNTRSTIISKGISAGRSQNSYRGLVRMGPKADGSRNYSQCDSMLIGSDAEANT
FPYIQVQNNQTKVEHEASTSKIGEDQLFYFAQRGISVEDAVSMMISGFCQDVFNQLPMEFAVEADRLLSLKLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:
GO:0016226: FeS assembly protein SufB

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=62.4217118997912, Blast_Score=642, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=26.797385620915, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52986; Mature: 52855

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATVENLVNQPYKYGFVTDIEVETIPKGLSEDVIRLISAKKEEPAFMLEFRLKAYRQWL
CCCCHHHHHCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KMKEPTWPHVDYPAIDYQDITYYSAPKEQEKKKSLDDVDPALLETFDKLGIPLSEQKRLS
HCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHH
NVAVDAVFDSVSVATTFKEQLAKEGVIFCSISEALKDFPELVEKYLGSVVPINDNFFSAL
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCEEECCCHHHHHH
NSAVFSDGSFVYIPKGVKCPMELSTYFRINTEGAGQFERTLIIAEEGSQVSYLEGCTAPM
HHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCEEEHHCCCCCCC
FDTNQLHAAVVELVALDDADIKYSTVQNWYAGDENGKGGIYNFVTKRGLCAGKNSKISWT
CCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEE
QVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNKQQADTGTKMIHVGKNTRSTIISKGI
EEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHH
SAGRSQNSYRGLVRMGPKADGSRNYSQCDSMLIGSDAEANTFPYIQVQNNQTKVEHEAST
HCCCCCCCCCCCEEECCCCCCCCCHHHHCCEEECCCCCCCCCCEEEECCCCCEEHHHHHH
SKIGEDQLFYFAQRGISVEDAVSMMISGFCQDVFNQLPMEFAVEADRLLSLKLEGSVG
HHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCC
>Mature Secondary Structure 
TATVENLVNQPYKYGFVTDIEVETIPKGLSEDVIRLISAKKEEPAFMLEFRLKAYRQWL
CCCHHHHHCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KMKEPTWPHVDYPAIDYQDITYYSAPKEQEKKKSLDDVDPALLETFDKLGIPLSEQKRLS
HCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHH
NVAVDAVFDSVSVATTFKEQLAKEGVIFCSISEALKDFPELVEKYLGSVVPINDNFFSAL
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCEEECCCHHHHHH
NSAVFSDGSFVYIPKGVKCPMELSTYFRINTEGAGQFERTLIIAEEGSQVSYLEGCTAPM
HHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCEEEHHCCCCCCC
FDTNQLHAAVVELVALDDADIKYSTVQNWYAGDENGKGGIYNFVTKRGLCAGKNSKISWT
CCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEE
QVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNKQQADTGTKMIHVGKNTRSTIISKGI
EEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHH
SAGRSQNSYRGLVRMGPKADGSRNYSQCDSMLIGSDAEANTFPYIQVQNNQTKVEHEAST
HCCCCCCCCCCCEEECCCCCCCCCHHHHCCEEECCCCCCCCCCEEEECCCCCEEHHHHHH
SKIGEDQLFYFAQRGISVEDAVSMMISGFCQDVFNQLPMEFAVEADRLLSLKLEGSVG
HHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]