| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334337
Identifier: 158334337
GI number: 158334337
Start: 1126606
End: 1127040
Strand: Direct
Name: 158334337
Synonym: AM1_1158
Alternate gene names: NA
Gene position: 1126606-1127040 (Clockwise)
Preceding gene: 158334335
Following gene: 158334338
Centisome position: 17.32
GC content: 48.74
Gene sequence:
>435_bases ATGCCAAAGCACTATCATCTCAGTGTTAATTCTGACCTCAATAACCTGCCTAAAGTTCTGGACTGGTTCCAACAGCTGCA CCCTACTCGAGTCGCAGAACAAGAGTGGCTGGAATGCCAGATAGCCCTGGCAGAAGGATTTACCAACGCGGTGAGCCATG CCCATCAATCGCTACCGCCCACTACCCCCATTCAGTTAGAGCTGGGAATTGAGCTAGATCATGTGGAAATCCGCATTTGG GATCAGGGTCCCACCTTTGATCTACGCCAATATTTACAGCATCACCCTACCTTCCCCAGCCAAGATATGGGCGGTGGTCG CGGGCTACTGCTGATCAATCGGATTGCTGATAACGTTCAATATCGAAGAATAGACAACTGCCAAAACTGTCTTTCTATCG TTAAGTACCTGTCTTTGAATGAGCCCATCCACTAA
Upstream 100 bases:
>100_bases CTATAATTAAGCTAAAGTCGCCTGGTCGAATAACGACACCACTTCTTATGTCAATAGCCTTGGACCCATGCAATTGGAGA GATTGACCTCCTCATAGCAG
Downstream 100 bases:
>100_bases GGATATTAAGCCTTGGATCGCTCTGAGCATCGGTAACTCCCGATTGCACTGGTTTTATTACGAAGGATCACATTTGGCTC AGACCTGGGACACCTGCCAC
Product: anti-sigma regulatory factor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPKHYHLSVNSDLNNLPKVLDWFQQLHPTRVAEQEWLECQIALAEGFTNAVSHAHQSLPPTTPIQLELGIELDHVEIRIW DQGPTFDLRQYLQHHPTFPSQDMGGGRGLLLINRIADNVQYRRIDNCQNCLSIVKYLSLNEPIH
Sequences:
>Translated_144_residues MPKHYHLSVNSDLNNLPKVLDWFQQLHPTRVAEQEWLECQIALAEGFTNAVSHAHQSLPPTTPIQLELGIELDHVEIRIW DQGPTFDLRQYLQHHPTFPSQDMGGGRGLLLINRIADNVQYRRIDNCQNCLSIVKYLSLNEPIH >Mature_143_residues PKHYHLSVNSDLNNLPKVLDWFQQLHPTRVAEQEWLECQIALAEGFTNAVSHAHQSLPPTTPIQLELGIELDHVEIRIWD QGPTFDLRQYLQHHPTFPSQDMGGGRGLLLINRIADNVQYRRIDNCQNCLSIVKYLSLNEPIH
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16609; Mature: 16478
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKHYHLSVNSDLNNLPKVLDWFQQLHPTRVAEQEWLECQIALAEGFTNAVSHAHQSLPP CCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TTPIQLELGIELDHVEIRIWDQGPTFDLRQYLQHHPTFPSQDMGGGRGLLLINRIADNVQ CCCEEEEECEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHCCHH YRRIDNCQNCLSIVKYLSLNEPIH HHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PKHYHLSVNSDLNNLPKVLDWFQQLHPTRVAEQEWLECQIALAEGFTNAVSHAHQSLPP CCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TTPIQLELGIELDHVEIRIWDQGPTFDLRQYLQHHPTFPSQDMGGGRGLLLINRIADNVQ CCCEEEEECEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHCCHH YRRIDNCQNCLSIVKYLSLNEPIH HHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA