| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334314
Identifier: 158334314
GI number: 158334314
Start: 1105651
End: 1106265
Strand: Reverse
Name: 158334314
Synonym: AM1_1133
Alternate gene names: NA
Gene position: 1106265-1105651 (Counterclockwise)
Preceding gene: 158334319
Following gene: 158334313
Centisome position: 17.01
GC content: 41.63
Gene sequence:
>615_bases ATGATTCGCAATAGTCTCAAGCGTTTGCTGATCAGCGCTGTATGTGTGTGCTTAGGTTTGTTGATAATGACTAATTCCGC ATGGGCTACCACCTACTCCTTCAAGAGTGCTGGCAATATTGGAGATGAGGGAGTGATCTCTGGCAAGGTTTCCTATGACA AAGATACTGTGGTCAATGCCTTAAATAGTGGCAAAGATTTGGAAGGGTTAATGGGCAGCTTAACCATCAATGATTTGGGT AAGGATGCAAGATTTTCTTTTGAATATATTTCTCCCCATACGGGGGTAAAGCATACAGAAGAGACCATCTGTAATCGGAA TATTTATGATTTGGATAATGGTCAAGACGGAAATTATTCAATTGGCGGCCAGGATGGTCCTTTCTTTAGCTTTGACAGTG GCGGCAACTTGTATTTGGTCGACTTCAAGTCCTGTGTTGGCGAAGAAGGTGGGCTAGCTAGCTCAATTTCCAAGAGGGAT CCCAAAATTGCTTATAGTGAGCTGGATGTGCAGTTTAGTCAGTATAAGTTGGCTGAATTCGACTATATCGGCAACAAGCC CCCTAGATTTATCCAGAAAAATATAAAAATTAAGTTCGACAGAGAAATTGCTTAA
Upstream 100 bases:
>100_bases TTTGAACTTTTTATCGATAGATGCGATTTTGATCTGTTGGCAAGCTTGTGTAATTATTGAGAGAGAATTTCAATAAAAAT CGTACAGAGGATTATCACCG
Downstream 100 bases:
>100_bases CACATGTTCCATTCCTGATCCAAGCAATTTCCCTTGGGCTGGAAAACAAACTGGTACGGGTTCAACATTTATCCGTCGTA CTCTCATTTCCGAAAATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MIRNSLKRLLISAVCVCLGLLIMTNSAWATTYSFKSAGNIGDEGVISGKVSYDKDTVVNALNSGKDLEGLMGSLTINDLG KDARFSFEYISPHTGVKHTEETICNRNIYDLDNGQDGNYSIGGQDGPFFSFDSGGNLYLVDFKSCVGEEGGLASSISKRD PKIAYSELDVQFSQYKLAEFDYIGNKPPRFIQKNIKIKFDREIA
Sequences:
>Translated_204_residues MIRNSLKRLLISAVCVCLGLLIMTNSAWATTYSFKSAGNIGDEGVISGKVSYDKDTVVNALNSGKDLEGLMGSLTINDLG KDARFSFEYISPHTGVKHTEETICNRNIYDLDNGQDGNYSIGGQDGPFFSFDSGGNLYLVDFKSCVGEEGGLASSISKRD PKIAYSELDVQFSQYKLAEFDYIGNKPPRFIQKNIKIKFDREIA >Mature_204_residues MIRNSLKRLLISAVCVCLGLLIMTNSAWATTYSFKSAGNIGDEGVISGKVSYDKDTVVNALNSGKDLEGLMGSLTINDLG KDARFSFEYISPHTGVKHTEETICNRNIYDLDNGQDGNYSIGGQDGPFFSFDSGGNLYLVDFKSCVGEEGGLASSISKRD PKIAYSELDVQFSQYKLAEFDYIGNKPPRFIQKNIKIKFDREIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22428; Mature: 22428
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRNSLKRLLISAVCVCLGLLIMTNSAWATTYSFKSAGNIGDEGVISGKVSYDKDTVVNA CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCCHHHHHHH LNSGKDLEGLMGSLTINDLGKDARFSFEYISPHTGVKHTEETICNRNIYDLDNGQDGNYS HHCCCCHHHHHHEEEHHHCCCCCEEEEEEECCCCCCCCHHHHHHCCCCEECCCCCCCCEE IGGQDGPFFSFDSGGNLYLVDFKSCVGEEGGLASSISKRDPKIAYSELDVQFSQYKLAEF ECCCCCCEEEECCCCCEEEEECHHHCCCCCCCHHHHHHCCCCEEEHHHCCCHHHEEEEHC DYIGNKPPRFIQKNIKIKFDREIA CCCCCCCHHHHHCCCEEEECCCCC >Mature Secondary Structure MIRNSLKRLLISAVCVCLGLLIMTNSAWATTYSFKSAGNIGDEGVISGKVSYDKDTVVNA CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCCHHHHHHH LNSGKDLEGLMGSLTINDLGKDARFSFEYISPHTGVKHTEETICNRNIYDLDNGQDGNYS HHCCCCHHHHHHEEEHHHCCCCCEEEEEEECCCCCCCCHHHHHHCCCCEECCCCCCCCEE IGGQDGPFFSFDSGGNLYLVDFKSCVGEEGGLASSISKRDPKIAYSELDVQFSQYKLAEF ECCCCCCEEEECCCCCEEEEECHHHCCCCCCCHHHHHHCCCCEEEHHHCCCHHHEEEEHC DYIGNKPPRFIQKNIKIKFDREIA CCCCCCCHHHHHCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA