Click here to switch to the map view.

The map label for this gene is crtI [H]

Identifier: 158334245

GI number: 158334245

Start: 1030977

End: 1032521

Strand: Reverse

Name: crtI [H]

Synonym: AM1_1063

Alternate gene names: 158334245

Gene position: 1032521-1030977 (Counterclockwise)

Preceding gene: 158334247

Following gene: 158334244

Centisome position: 15.88

GC content: 52.36

Gene sequence:

>1545_bases
ATGGTTAAGGACGACCATTTAGATGTAATCATCATCGGCAGTGGCACTGGTGGATTGAGTTGTGGGGCGCTGTTGGCCCA
GTATGGCCTTAAGGTTTTGGTCTGTGAAAGTCATACTTTACCGGGTGGGGCCGCCCATGGCTTCCAACGCCAGGGCTATA
CCTTTGACTCAGGTCCTTCTCTGTTCTCAGGATTATCCTTCAGTCCCTCCCCGAACCCCTTACGCCAGGTGCTAGATGCC
ATTGGTGAAGATTTAGAATGGGCAACCTACGGTACTTGGGGATGCTGTTTACCAGAGGGGAATTTCTTTACCTCGGTCGG
GGCCGATCAGTTTTGTGAAGTCGTGCGGGAGCTGCGAGGAGAATCAGCGGTTGCCCAATGGCGAACTTTGCAGCAGCGAA
TGGAGCCGTTGAAAGAAGCTGCGATCGCACTTCCTGCTGCAGCAATACGATTTGACTTAGGTGTATTGCAAACCGTCGGT
CGGTTTATCCCTAAACTCCTCAAGCAATTTCCCCATCTCGCCCAACTAACCGGCCCGTTTAGCCAAGTAATTCAGGGGCA
GGTCACGGATGAATTTCTGCTTAACTGGCTGGATTTAATGTGTTTCCTACTGGCGGGGTTACCAGCGGATGGGATTATTG
CGGCGGAAATGGCCTTTATGTTTGGGGAATGGTATCGCCCGGATGTGGTGCTGGATTATCCCATGGGTGGCAGTGGTGCG
ATCGCAGAAGCGCTGCTCCGAGGGTTGACAAAACAGGACGGCCAGATCCGATTCAGTTCCCATGTCGAAGAGATCCTGAT
TGAGAACCATCGAGCAGTTGGTGTGCGGTTACGAACCGGGGAGGAATTGCGATGCCGACAGGCGGTGATTTCAAATGCGT
CTTTCTGGGATACGGCTGCTATATTGCCCGCTTCCCATAGCCGTTACCGACAACAACAAACGTTGCCGGACTGCCCTAGC
TTTATGCATTTTCACTTGGGAATTGATGGGCAGAACCTGCCCTCAGATTTAGCCTGTCACTACATTGTGGTGAATGATTG
GCAGCAAGGAGTAACGGCCCCCCAGAATGTAGTTTTGGTGTCTATTCCGTCCCTGCTAGATCCCTCACTTGCCCCTGAGA
ATAAGCATGTGATTCATGTTTATACCCCTGGCAATGAACCCTATGACATCTGGCAGGGGTTGGATCGGAACAGTTCTGAC
TATGCTCAGCTTAAGCAACAGCGGGCAGAGGTGATGTGGCAGGCTTTGGAACGGATTATCCCCGATATTCGATCCCGTTG
TGAGGTGTCCTTGGTGGGCACACCCTTAACCCATGAGCGATTTCTACGTCGCCATCGGGGTACCTATGGACCGGGGATTC
GAGCAGGTACTGGGCTTTTCCCTGGCCCCAAAACGAAAATTCCGGGTCTGCTTTGCTGTGGCGATTCCACTTTTCCGGGG
ATTGGTATGCCTGCGGTTGCGGCGAGTGGATTCTTAGCGGCCCATGCCTTAGTGCCTGTGCAAAAACAGCTGAAAATGCT
TCGGCATATTGGCTGTGTGAATTAG

Upstream 100 bases:

>100_bases
TGCAGTAAGGTCATAGGCGTTTAGAGGAGAAGAGAAATCGCGTTGTTTTAATATCCTTGGCGAATTTACCATTAATAACC
GAGGTATGGAGTAACCAAGG

Downstream 100 bases:

>100_bases
AGCCTTGAGCTTCATGGGGCTATGGCGAGGGGCAAGCACAATTCTCAACAAAGGTAAGAGGCGTTGGTCAGTATGATAAT
TCCCCCTTATGGCAGTGCCT

Product: carotenoid isomerase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MVKDDHLDVIIIGSGTGGLSCGALLAQYGLKVLVCESHTLPGGAAHGFQRQGYTFDSGPSLFSGLSFSPSPNPLRQVLDA
IGEDLEWATYGTWGCCLPEGNFFTSVGADQFCEVVRELRGESAVAQWRTLQQRMEPLKEAAIALPAAAIRFDLGVLQTVG
RFIPKLLKQFPHLAQLTGPFSQVIQGQVTDEFLLNWLDLMCFLLAGLPADGIIAAEMAFMFGEWYRPDVVLDYPMGGSGA
IAEALLRGLTKQDGQIRFSSHVEEILIENHRAVGVRLRTGEELRCRQAVISNASFWDTAAILPASHSRYRQQQTLPDCPS
FMHFHLGIDGQNLPSDLACHYIVVNDWQQGVTAPQNVVLVSIPSLLDPSLAPENKHVIHVYTPGNEPYDIWQGLDRNSSD
YAQLKQQRAEVMWQALERIIPDIRSRCEVSLVGTPLTHERFLRRHRGTYGPGIRAGTGLFPGPKTKIPGLLCCGDSTFPG
IGMPAVAASGFLAAHALVPVQKQLKMLRHIGCVN

Sequences:

>Translated_514_residues
MVKDDHLDVIIIGSGTGGLSCGALLAQYGLKVLVCESHTLPGGAAHGFQRQGYTFDSGPSLFSGLSFSPSPNPLRQVLDA
IGEDLEWATYGTWGCCLPEGNFFTSVGADQFCEVVRELRGESAVAQWRTLQQRMEPLKEAAIALPAAAIRFDLGVLQTVG
RFIPKLLKQFPHLAQLTGPFSQVIQGQVTDEFLLNWLDLMCFLLAGLPADGIIAAEMAFMFGEWYRPDVVLDYPMGGSGA
IAEALLRGLTKQDGQIRFSSHVEEILIENHRAVGVRLRTGEELRCRQAVISNASFWDTAAILPASHSRYRQQQTLPDCPS
FMHFHLGIDGQNLPSDLACHYIVVNDWQQGVTAPQNVVLVSIPSLLDPSLAPENKHVIHVYTPGNEPYDIWQGLDRNSSD
YAQLKQQRAEVMWQALERIIPDIRSRCEVSLVGTPLTHERFLRRHRGTYGPGIRAGTGLFPGPKTKIPGLLCCGDSTFPG
IGMPAVAASGFLAAHALVPVQKQLKMLRHIGCVN
>Mature_514_residues
MVKDDHLDVIIIGSGTGGLSCGALLAQYGLKVLVCESHTLPGGAAHGFQRQGYTFDSGPSLFSGLSFSPSPNPLRQVLDA
IGEDLEWATYGTWGCCLPEGNFFTSVGADQFCEVVRELRGESAVAQWRTLQQRMEPLKEAAIALPAAAIRFDLGVLQTVG
RFIPKLLKQFPHLAQLTGPFSQVIQGQVTDEFLLNWLDLMCFLLAGLPADGIIAAEMAFMFGEWYRPDVVLDYPMGGSGA
IAEALLRGLTKQDGQIRFSSHVEEILIENHRAVGVRLRTGEELRCRQAVISNASFWDTAAILPASHSRYRQQQTLPDCPS
FMHFHLGIDGQNLPSDLACHYIVVNDWQQGVTAPQNVVLVSIPSLLDPSLAPENKHVIHVYTPGNEPYDIWQGLDRNSSD
YAQLKQQRAEVMWQALERIIPDIRSRCEVSLVGTPLTHERFLRRHRGTYGPGIRAGTGLFPGPKTKIPGLLCCGDSTFPG
IGMPAVAASGFLAAHALVPVQKQLKMLRHIGCVN

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 56272; Mature: 56272

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKDDHLDVIIIGSGTGGLSCGALLAQYGLKVLVCESHTLPGGAAHGFQRQGYTFDSGPS
CCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCH
LFSGLSFSPSPNPLRQVLDAIGEDLEWATYGTWGCCLPEGNFFTSVGADQFCEVVRELRG
HHCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCEEECCCCCEEECCCHHHHHHHHHHHCC
ESAVAQWRTLQQRMEPLKEAAIALPAAAIRFDLGVLQTVGRFIPKLLKQFPHLAQLTGPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHH
SQVIQGQVTDEFLLNWLDLMCFLLAGLPADGIIAAEMAFMFGEWYRPDVVLDYPMGGSGA
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHH
IAEALLRGLTKQDGQIRFSSHVEEILIENHRAVGVRLRTGEELRCRQAVISNASFWDTAA
HHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCE
ILPASHSRYRQQQTLPDCPSFMHFHLGIDGQNLPSDLACHYIVVNDWQQGVTAPQNVVLV
ECCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCHHCCCCCCCEEEE
SIPSLLDPSLAPENKHVIHVYTPGNEPYDIWQGLDRNSSDYAQLKQQRAEVMWQALERII
ECCHHCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PDIRSRCEVSLVGTPLTHERFLRRHRGTYGPGIRAGTGLFPGPKTKIPGLLCCGDSTFPG
HHHHHHCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
IGMPAVAASGFLAAHALVPVQKQLKMLRHIGCVN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVKDDHLDVIIIGSGTGGLSCGALLAQYGLKVLVCESHTLPGGAAHGFQRQGYTFDSGPS
CCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCH
LFSGLSFSPSPNPLRQVLDAIGEDLEWATYGTWGCCLPEGNFFTSVGADQFCEVVRELRG
HHCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCEEECCCCCEEECCCHHHHHHHHHHHCC
ESAVAQWRTLQQRMEPLKEAAIALPAAAIRFDLGVLQTVGRFIPKLLKQFPHLAQLTGPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHH
SQVIQGQVTDEFLLNWLDLMCFLLAGLPADGIIAAEMAFMFGEWYRPDVVLDYPMGGSGA
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHH
IAEALLRGLTKQDGQIRFSSHVEEILIENHRAVGVRLRTGEELRCRQAVISNASFWDTAA
HHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCE
ILPASHSRYRQQQTLPDCPSFMHFHLGIDGQNLPSDLACHYIVVNDWQQGVTAPQNVVLV
ECCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCHHCCCCCCCEEEE
SIPSLLDPSLAPENKHVIHVYTPGNEPYDIWQGLDRNSSDYAQLKQQRAEVMWQALERII
ECCHHCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PDIRSRCEVSLVGTPLTHERFLRRHRGTYGPGIRAGTGLFPGPKTKIPGLLCCGDSTFPG
HHHHHHCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
IGMPAVAASGFLAAHALVPVQKQLKMLRHIGCVN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2747617; 2546948; 2144293 [H]