| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334189
Identifier: 158334189
GI number: 158334189
Start: 975901
End: 976254
Strand: Direct
Name: 158334189
Synonym: AM1_1005
Alternate gene names: NA
Gene position: 975901-976254 (Clockwise)
Preceding gene: 158334187
Following gene: 158334194
Centisome position: 15.01
GC content: 47.18
Gene sequence:
>354_bases ATGCCTCTCATTAAAGTGCAATCTTCGATCAATGCTCCTGAACAGCCTGTTGTGGAAGCCTTATTAAAGCAACTCTCTGC TCAGCTCGCCCAACATTTAGGTAAGCCAGAGTCCTATGTGATGACAGCTTTTGAGGCAGAAACGCCAATGACATTTGCCG GAACGACTGAACCTGTTTGCTACGTGGAAATTAAAAGTGTAGGCACGATGAGTAGTCCTCAGACAAAAGCCATGAGCCAG GCGTTTTGCCAAGAGCTCGAAACCGCTTTAGGGGTCCCAAAGCAGCGAATCTATATTGAGTTTGCGGACGCAAAGGGCAT GATGTGGGGATGGAATGGTTCAACCTTTGGTTAA
Upstream 100 bases:
>100_bases CTAAAGCAATCGCTTTTTCCATCCATTGTTGATGTTCAGGGTAGCTGGGGACGTCCACTCTTGATTTAATAAAACTATCG TTACATGCTAGCCGACTATT
Downstream 100 bases:
>100_bases CAGATCCTTGCTCAAGGAGCCGTTATGAGGTTTGAATAATTTGTTTGGAAGTCATTAAGGTTTCAAGGCTAATCACCCCA GGAGAAAGGCTTTTGGCTGA
Product: macrophage migration inhibitory factor
Products: NA
Alternate protein names: Macrophage Migration Inhibitory Factor; ATLS1-Like Light-Inducible Protein; Phenylpyruvate Tautomerase; Macrophage Migration Inhibitory Factor Superfamily; MIF/Phenylpyruvate Tautomerase Family Protein; Macrophage Migration Inhibitory Factor Family; Glycosyl Transferase
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MPLIKVQSSINAPEQPVVEALLKQLSAQLAQHLGKPESYVMTAFEAETPMTFAGTTEPVCYVEIKSVGTMSSPQTKAMSQ AFCQELETALGVPKQRIYIEFADAKGMMWGWNGSTFG
Sequences:
>Translated_117_residues MPLIKVQSSINAPEQPVVEALLKQLSAQLAQHLGKPESYVMTAFEAETPMTFAGTTEPVCYVEIKSVGTMSSPQTKAMSQ AFCQELETALGVPKQRIYIEFADAKGMMWGWNGSTFG >Mature_116_residues PLIKVQSSINAPEQPVVEALLKQLSAQLAQHLGKPESYVMTAFEAETPMTFAGTTEPVCYVEIKSVGTMSSPQTKAMSQA FCQELETALGVPKQRIYIEFADAKGMMWGWNGSTFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4505185, Length=116, Percent_Identity=32.7586206896552, Blast_Score=78, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17556260, Length=117, Percent_Identity=35.042735042735, Blast_Score=78, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12763; Mature: 12632
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIKVQSSINAPEQPVVEALLKQLSAQLAQHLGKPESYVMTAFEAETPMTFAGTTEPVC CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCEEECCCCCCEE YVEIKSVGTMSSPQTKAMSQAFCQELETALGVPKQRIYIEFADAKGMMWGWNGSTFG EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCC >Mature Secondary Structure PLIKVQSSINAPEQPVVEALLKQLSAQLAQHLGKPESYVMTAFEAETPMTFAGTTEPVC CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCEEECCCCCCEE YVEIKSVGTMSSPQTKAMSQAFCQELETALGVPKQRIYIEFADAKGMMWGWNGSTFG EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA