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The map label for this gene is dppC [H]

Identifier: 158334128

GI number: 158334128

Start: 912228

End: 913133

Strand: Direct

Name: dppC [H]

Synonym: AM1_0944

Alternate gene names: 158334128

Gene position: 912228-913133 (Clockwise)

Preceding gene: 158334126

Following gene: 158334129

Centisome position: 14.03

GC content: 47.68

Gene sequence:

>906_bases
ATGACTCCTACTAAAGTTTGGCCACGTTTTCTACGGTTTCCCCACCATGCCAGCTTATCAGTCTGGTTAATGATTACGGG
CATTATGATTACCCTGTTTTTTGTCATTATTGCTCTAATAGCTCCCTCTTTAGAGCAATGGAATTGGATTCAAGATCCAA
CCTCCACCAGCATTCTTGAAAATATTCCCCATAGTGCGCCCTCTGGTAAGCATTGGTTTGGTACGGACAAGCTCGGGTAT
GACGTCTTTGCCCGAACGGTTTATGGGGCTCGGGCTGCCCTGCAAGTTGTGGTGGCAGCAACCTTATTTAGTGTTGTTTT
TGGCGTTATTTTGGGACTCATCAGTGGGTACCTTGGGGGCTGGGTGGATCGAATCTTACTCTTTTTAATGGATTCGATTT
ATGCCATTCCAGGTTTACTGATTGCCGTAACCTTGTCCTTTTCGATTGGTGAGGCAGCCCGAGGAGTTCCGAGTGCTGCG
GCTGCGTTAGGTGTCGCCTATATCCCTAAGTACTATCGTGTGGTTCGGAACCATACCGTCAGCATTAAGACAGAGCTGTT
TATGGAAGCCGCTAGAGCTTTAGGGGCTTCTCCTTGGCGAATTATTACGCGATATCTATTTGGTAACGTGATTCAGAGTG
TGCCTGTTTTGTTCTCTTTAAATGCAGCAGACTCTGTTTTAACCCTGGGGGCTCTAGGTTTCTTGGGGCTAGGGTTACCG
GCTGAAATTCCAGAATGGGGATATGACTTAAAAGTTGCCCTAGAAGGATTCACCGGAGAAGTGTGGTGGACCACCCTATT
TCCTGGCTTAGCCATGGCCTCATTATCGGTGGGATTATCCCTCGCCAGTGAAGGTCTAAGTGAGTTTTTCAATCCTCTAC
AGCGGCGGGATGCCGATCAGAGCTAA

Upstream 100 bases:

>100_bases
GTGTACCCTAAAACCGGCTAAAAAATCAGAACTTTTGTAACATTTCTCTCATATTCCGTATCAATTGTAGTGAATTCTTT
ATTCGTATTTTCTTTCGCCA

Downstream 100 bases:

>100_bases
GCACCAAGGTAAGATGATGGTGATTGCTGTGAGGTGTCTCCACAAAGCTTTATGTGGGCTGTTCTTTCGCCTTTCAGTAT
TCCCCCTCCCATCACACTTT

Product: peptide ABC transporter permease subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTPTKVWPRFLRFPHHASLSVWLMITGIMITLFFVIIALIAPSLEQWNWIQDPTSTSILENIPHSAPSGKHWFGTDKLGY
DVFARTVYGARAALQVVVAATLFSVVFGVILGLISGYLGGWVDRILLFLMDSIYAIPGLLIAVTLSFSIGEAARGVPSAA
AALGVAYIPKYYRVVRNHTVSIKTELFMEAARALGASPWRIITRYLFGNVIQSVPVLFSLNAADSVLTLGALGFLGLGLP
AEIPEWGYDLKVALEGFTGEVWWTTLFPGLAMASLSVGLSLASEGLSEFFNPLQRRDADQS

Sequences:

>Translated_301_residues
MTPTKVWPRFLRFPHHASLSVWLMITGIMITLFFVIIALIAPSLEQWNWIQDPTSTSILENIPHSAPSGKHWFGTDKLGY
DVFARTVYGARAALQVVVAATLFSVVFGVILGLISGYLGGWVDRILLFLMDSIYAIPGLLIAVTLSFSIGEAARGVPSAA
AALGVAYIPKYYRVVRNHTVSIKTELFMEAARALGASPWRIITRYLFGNVIQSVPVLFSLNAADSVLTLGALGFLGLGLP
AEIPEWGYDLKVALEGFTGEVWWTTLFPGLAMASLSVGLSLASEGLSEFFNPLQRRDADQS
>Mature_300_residues
TPTKVWPRFLRFPHHASLSVWLMITGIMITLFFVIIALIAPSLEQWNWIQDPTSTSILENIPHSAPSGKHWFGTDKLGYD
VFARTVYGARAALQVVVAATLFSVVFGVILGLISGYLGGWVDRILLFLMDSIYAIPGLLIAVTLSFSIGEAARGVPSAAA
ALGVAYIPKYYRVVRNHTVSIKTELFMEAARALGASPWRIITRYLFGNVIQSVPVLFSLNAADSVLTLGALGFLGLGLPA
EIPEWGYDLKVALEGFTGEVWWTTLFPGLAMASLSVGLSLASEGLSEFFNPLQRRDADQS

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=288, Percent_Identity=30.2083333333333, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1787760, Length=270, Percent_Identity=28.1481481481481, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1789964, Length=229, Percent_Identity=35.8078602620087, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1789889, Length=251, Percent_Identity=28.6852589641434, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1787498, Length=285, Percent_Identity=31.9298245614035, Blast_Score=88, Evalue=8e-19,
Organism=Escherichia coli, GI1788505, Length=244, Percent_Identity=29.9180327868852, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787549, Length=204, Percent_Identity=31.3725490196078, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32795; Mature: 32663

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTKVWPRFLRFPHHASLSVWLMITGIMITLFFVIIALIAPSLEQWNWIQDPTSTSILE
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHH
NIPHSAPSGKHWFGTDKLGYDVFARTVYGARAALQVVVAATLFSVVFGVILGLISGYLGG
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVDRILLFLMDSIYAIPGLLIAVTLSFSIGEAARGVPSAAAALGVAYIPKYYRVVRNHTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH
SIKTELFMEAARALGASPWRIITRYLFGNVIQSVPVLFSLNAADSVLTLGALGFLGLGLP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCC
AEIPEWGYDLKVALEGFTGEVWWTTLFPGLAMASLSVGLSLASEGLSEFFNPLQRRDADQ
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
S
C
>Mature Secondary Structure 
TPTKVWPRFLRFPHHASLSVWLMITGIMITLFFVIIALIAPSLEQWNWIQDPTSTSILE
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHH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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]