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The map label for this gene is atpB

Identifier: 158334075

GI number: 158334075

Start: 862197

End: 862919

Strand: Direct

Name: atpB

Synonym: AM1_0891

Alternate gene names: 158334075

Gene position: 862197-862919 (Clockwise)

Preceding gene: 158334074

Following gene: 158334076

Centisome position: 13.26

GC content: 47.72

Gene sequence:

>723_bases
TTGCCTTTAGCAAGTTTAGAGGTGGGTCAGCACTTATACTGGCAGATCGGTGGATTAAAGGTTCATGGTCAGGTTCTGAT
TACATCCTGGATCGTCATCGGCATCTTAGTCATTGTGTCTGTGCTGGCAACCCGCAAGGTTGAGCGCATTCCTAGCGGTC
TCCAAAATTTCATGGAGTACGCGCTAGAGTTTGTCCGTGATTTGACCAAAAATCAAATTGGCGAGAAAGAATACCGTCCG
TGGGTGCCATTCATCGGGACGCTCTTTCTATTCATATTTGTCTCCAATTGGTCCGGTGCTTTATTTCCCTGGAAGCTGAT
TAGCCTTCCTGAGGGAGAGCTCGCAGCACCCACAAACGATATCAACACCACTGTCGCATTGGCATTGTGTACCTCGTTTG
TCTACTTTTACGCAGGATTTCGGAAAAAAGGACTCGGTTACTTTCGCAAGTACATCGAACCCACTCCGGTACTGCTCCCA
ATTGCGATTCTTGAAGATTTCACCAAGCCGCTTTCCCTTAGTTTCCGTCTGTTTGGTAACATCCTTGCCGACGAACTAGT
GGTTGCAGTGTTGGTGTTACTGGTTCCCTTAATTGTGCCATTGCCTGTGATGTTGCTGGGACTCTTTACCAGCGGTATTC
AAGCATTGGTATTTGCGACCTTGGCTGGTGCCTATATCCACGAGTCATTAGAAGGTCATGGGGAAGAAGAAGAGGCCCAC
TAA

Upstream 100 bases:

>100_bases
GACAGAATGCCCCTATTTTTTTGCCTGAAGTTCCAACGAGGTTGGGCGTATTATGCATCACAGCAGCCTTCTGCTAGATT
CTTTTAATTGGTTCACCGCC

Downstream 100 bases:

>100_bases
CCTCAAAGTCACGTTACTGAAACAGTAATCGATTGGCTCCAAAATTAGTGGCTGGTGCAGGCATCTTAAGTCTGACAACC
TGTGTAAGGTCTACCTTGTT

Product: F0F1 ATP synthase subunit A

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F0 sector subunit a 1; F-ATPase subunit 6 1

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MPLASLEVGQHLYWQIGGLKVHGQVLITSWIVIGILVIVSVLATRKVERIPSGLQNFMEYALEFVRDLTKNQIGEKEYRP
WVPFIGTLFLFIFVSNWSGALFPWKLISLPEGELAAPTNDINTTVALALCTSFVYFYAGFRKKGLGYFRKYIEPTPVLLP
IAILEDFTKPLSLSFRLFGNILADELVVAVLVLLVPLIVPLPVMLLGLFTSGIQALVFATLAGAYIHESLEGHGEEEEAH

Sequences:

>Translated_240_residues
MPLASLEVGQHLYWQIGGLKVHGQVLITSWIVIGILVIVSVLATRKVERIPSGLQNFMEYALEFVRDLTKNQIGEKEYRP
WVPFIGTLFLFIFVSNWSGALFPWKLISLPEGELAAPTNDINTTVALALCTSFVYFYAGFRKKGLGYFRKYIEPTPVLLP
IAILEDFTKPLSLSFRLFGNILADELVVAVLVLLVPLIVPLPVMLLGLFTSGIQALVFATLAGAYIHESLEGHGEEEEAH
>Mature_239_residues
PLASLEVGQHLYWQIGGLKVHGQVLITSWIVIGILVIVSVLATRKVERIPSGLQNFMEYALEFVRDLTKNQIGEKEYRPW
VPFIGTLFLFIFVSNWSGALFPWKLISLPEGELAAPTNDINTTVALALCTSFVYFYAGFRKKGLGYFRKYIEPTPVLLPI
AILEDFTKPLSLSFRLFGNILADELVVAVLVLLVPLIVPLPVMLLGLFTSGIQALVFATLAGAYIHESLEGHGEEEEAH

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family

Homologues:

Organism=Escherichia coli, GI1790176, Length=211, Percent_Identity=25.1184834123223, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATP61_ACAM1 (B0BZK7)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001515247.1
- ProteinModelPortal:   B0BZK7
- SMR:   B0BZK7
- GeneID:   5679717
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_0891
- HOGENOM:   HBG734175
- OMA:   RIIAFAF
- ProtClustDB:   PRK05815
- BioCyc:   AMAR329726:AM1_0891-MONOMER
- HAMAP:   MF_01393
- InterPro:   IPR000568
- InterPro:   IPR023011
- Gene3D:   G3DSA:1.20.120.220
- PANTHER:   PTHR11410
- PRINTS:   PR00123
- TIGRFAMs:   TIGR01131

Pfam domain/function: PF00119 ATP-synt_A; SSF81336 ATPase_F0_A

EC number: 3.6.3.14

Molecular weight: Translated: 26689; Mature: 26558

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x21e6e630)-; HASH(0x2221185c)-; HASH(0x22a19d80)-; HASH(0x21db16e0)-; HASH(0x22cb1bdc)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLASLEVGQHLYWQIGGLKVHGQVLITSWIVIGILVIVSVLATRKVERIPSGLQNFMEY
CCCCHHHHCCHHHEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEFVRDLTKNQIGEKEYRPWVPFIGTLFLFIFVSNWSGALFPWKLISLPEGELAAPTND
HHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCC
INTTVALALCTSFVYFYAGFRKKGLGYFRKYIEPTPVLLPIAILEDFTKPLSLSFRLFGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHH
ILADELVVAVLVLLVPLIVPLPVMLLGLFTSGIQALVFATLAGAYIHESLEGHGEEEEAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure 
PLASLEVGQHLYWQIGGLKVHGQVLITSWIVIGILVIVSVLATRKVERIPSGLQNFMEY
CCCHHHHCCHHHEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEFVRDLTKNQIGEKEYRPWVPFIGTLFLFIFVSNWSGALFPWKLISLPEGELAAPTND
HHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCC
INTTVALALCTSFVYFYAGFRKKGLGYFRKYIEPTPVLLPIAILEDFTKPLSLSFRLFGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHH
ILADELVVAVLVLLVPLIVPLPVMLLGLFTSGIQALVFATLAGAYIHESLEGHGEEEEAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA