| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158334070
Identifier: 158334070
GI number: 158334070
Start: 858208
End: 858621
Strand: Direct
Name: 158334070
Synonym: AM1_0886
Alternate gene names: NA
Gene position: 858208-858621 (Clockwise)
Preceding gene: 158334069
Following gene: 158334071
Centisome position: 13.2
GC content: 41.3
Gene sequence:
>414_bases GTGCCATCCAAGGTCAGCACAGCGCAGTTTGATGGAGACTATGACCTTGTTCCTGAGGAAAGTCCAAGCATCGCAAAGAT ACAAACTAAGCTTGATGCCACAACTCATCCCAAAAAGCGCGAGAATTTAGAAACACTCTTAAATCTGATGATTGAAGAGA ATAAGGTGCTGCAAATACAAAGTGGCATTATTAGGCTAGGGACTACTTTACAGCAGGAATTCTCACTTCAAAATGGAAAG ATTACGGCTTCCGTATTTCAGGGGAAGGCAGTTTGGCATGAAGATATTGGTGATCCTGGAGACTCCTCAGTAGTCACAGT AAGACTTCACCTCCAAAATGAACGACTTGAATTCAGTTTCTATGATGAGACTAACGAGCCTTTTGAACCTTTAGTATTTC GTAAATCTTCATAA
Upstream 100 bases:
>100_bases GCTATTGAAAGTTTGCTTATGGCTTTCACAAATGCTTGTGATAGTGGCGTTTTTAGCTAGTTGTAGTGTTCCAGATCTCA ACCCAAAACAAGAATTTTCA
Downstream 100 bases:
>100_bases CGTTCTTGAGAGAAAGGATGCTAGCAAGTCCTGAATAATAGTGGGCACAGAGCACTAAAAATTATAGGTGGCAAAGGGGG AATCCAAGCTTGGGATCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MPSKVSTAQFDGDYDLVPEESPSIAKIQTKLDATTHPKKRENLETLLNLMIEENKVLQIQSGIIRLGTTLQQEFSLQNGK ITASVFQGKAVWHEDIGDPGDSSVVTVRLHLQNERLEFSFYDETNEPFEPLVFRKSS
Sequences:
>Translated_137_residues MPSKVSTAQFDGDYDLVPEESPSIAKIQTKLDATTHPKKRENLETLLNLMIEENKVLQIQSGIIRLGTTLQQEFSLQNGK ITASVFQGKAVWHEDIGDPGDSSVVTVRLHLQNERLEFSFYDETNEPFEPLVFRKSS >Mature_136_residues PSKVSTAQFDGDYDLVPEESPSIAKIQTKLDATTHPKKRENLETLLNLMIEENKVLQIQSGIIRLGTTLQQEFSLQNGKI TASVFQGKAVWHEDIGDPGDSSVVTVRLHLQNERLEFSFYDETNEPFEPLVFRKSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15479; Mature: 15347
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKVSTAQFDGDYDLVPEESPSIAKIQTKLDATTHPKKRENLETLLNLMIEENKVLQIQ CCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEE SGIIRLGTTLQQEFSLQNGKITASVFQGKAVWHEDIGDPGDSSVVTVRLHLQNERLEFSF CCEEECCCHHHHHHCCCCCEEEEEEECCCEEECCCCCCCCCCCEEEEEEEEECCEEEEEE YDETNEPFEPLVFRKSS ECCCCCCCCCEEEEECC >Mature Secondary Structure PSKVSTAQFDGDYDLVPEESPSIAKIQTKLDATTHPKKRENLETLLNLMIEENKVLQIQ CCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEE SGIIRLGTTLQQEFSLQNGKITASVFQGKAVWHEDIGDPGDSSVVTVRLHLQNERLEFSF CCEEECCCHHHHHHCCCCCEEEEEEECCCEEECCCCCCCCCCCEEEEEEEEECCEEEEEE YDETNEPFEPLVFRKSS ECCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA