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The map label for this gene is yoeB [H]

Identifier: 158334064

GI number: 158334064

Start: 854579

End: 854875

Strand: Direct

Name: yoeB [H]

Synonym: AM1_0880

Alternate gene names: 158334064

Gene position: 854579-854875 (Clockwise)

Preceding gene: 158334063

Following gene: 158334067

Centisome position: 13.14

GC content: 42.76

Gene sequence:

>297_bases
TTGGGGAAGAAGAAGGCTAAGTTTATCCCTACTGAGGTCAAGTGGGAAATCATCCTTGATCAAAATTTTAGAGAAGATTT
GCAGTATTGGATTCAACAGGATCGGAAGCTGGCACTAAGGTTACTGGCTGTGGTTGAATCCATTGCCATAAATCCATTTA
CTGGCATTGGCAAGCCCGAAGCTCTTAAGCATCTAGGTTCTAATTTGTGGTCCCGACGCCTGAATCAAGAACACCGCATT
GTGTATCTTGTTCGGGATGGGAAAGTATATCTGCTAGCAGCAAAATATCACTATTAG

Upstream 100 bases:

>100_bases
TCGCCCGCCAATGCCACCCGTCTCTTTGATGCGATCGCACGAGCTGAAGCGGGAGAAGGACAGCCCACTACTCTAGATGA
ACTCACCCAGGAGCTGGGCT

Downstream 100 bases:

>100_bases
GCCATGCTCCCGTCAATTGCTTCGCATCTGCGGGCAAGCAGGGGCTTTGGGTTGAGCAATCTGGCATTCACCTACTAGAC
AGGGCTGATTGTAAACCGCT

Product: addiction module antitoxin

Products: NA

Alternate protein names: Endoribonuclease YoeB; Putative mRNA interferase YoeB [H]

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MGKKKAKFIPTEVKWEIILDQNFREDLQYWIQQDRKLALRLLAVVESIAINPFTGIGKPEALKHLGSNLWSRRLNQEHRI
VYLVRDGKVYLLAAKYHY

Sequences:

>Translated_98_residues
MGKKKAKFIPTEVKWEIILDQNFREDLQYWIQQDRKLALRLLAVVESIAINPFTGIGKPEALKHLGSNLWSRRLNQEHRI
VYLVRDGKVYLLAAKYHY
>Mature_97_residues
GKKKAKFIPTEVKWEIILDQNFREDLQYWIQQDRKLALRLLAVVESIAINPFTGIGKPEALKHLGSNLWSRRLNQEHRIV
YLVRDGKVYLLAAKYHY

Specific function: Part of a toxin-antitoxin (TA) module. Has RNase activity and preferentially cleaves at the 3'-end of purine ribonucleotides [H]

COG id: COG4115

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YoeB family [H]

Homologues:

Organism=Escherichia coli, GI87082025, Length=82, Percent_Identity=37.8048780487805, Blast_Score=72, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009614 [H]

Pfam domain/function: PF06769 Plasmid_Txe [H]

EC number: NA

Molecular weight: Translated: 11593; Mature: 11462

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKKAKFIPTEVKWEIILDQNFREDLQYWIQQDRKLALRLLAVVESIAINPFTGIGKPE
CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ALKHLGSNLWSRRLNQEHRIVYLVRDGKVYLLAAKYHY
HHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEEEECC
>Mature Secondary Structure 
GKKKAKFIPTEVKWEIILDQNFREDLQYWIQQDRKLALRLLAVVESIAINPFTGIGKPE
CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ALKHLGSNLWSRRLNQEHRIVYLVRDGKVYLLAAKYHY
HHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]