Click here to switch to the map view.

The map label for this gene is 158334052

Identifier: 158334052

GI number: 158334052

Start: 844675

End: 846507

Strand: Direct

Name: 158334052

Synonym: AM1_0866

Alternate gene names: NA

Gene position: 844675-846507 (Clockwise)

Preceding gene: 158334051

Following gene: 158334056

Centisome position: 12.99

GC content: 48.17

Gene sequence:

>1833_bases
ATGACCAATATTCGGGATAAATCCCTAGTTTTTTCATCTCTTGCATTATGGGCCTGTTTGCTCCCTACAGCAGTAGGAGC
AGTAGAACCAACCGCTTTAGAAGAAGTACAAGCTGATACGACTGCGATCCCCTCCTTGGAGTTAGCGCTCAATTCCGACG
CTAATGATAGTGAGGAATCCCAAGTATTCTTGGCTCCCTCAGACTTACAGACAGAGCTGGATGCAAATTCTGATAAAGCC
AATAGTACAGTTGCGGAATTGGAGACCTTACGGTTAGCAGATCACTCTGTCTCAACATCTCCTTCTGTTGCAGATTTGAT
GGAGGAGACTAAAACGGATTCCGTGGGTCAAGTGACCTCCGTATCTCAGTTATCTGATGTTCAGCCAGATGATTGGGCGT
TTCAAGCGATTCAGTCTTTAGTTGAGCGCTATGGCTGTGTCGCCGGTTACCCCAATGGTACGTTTCGCCCAAGTCGAGCC
ATGTCTCGTCGGGAAGCTGCCGCTTTAGTGAACGCCTGTCTGGATAACCTCAGCAATCGTTTCGCGACGAAGGAAGATCT
GGATGCCCTGAAAGCCCTACAAGATGAGTTTGCAGCTGAACTGGCAACTCTAAGAGGGCGGGTTGATGGTCTGGAAGCTC
GGGTTGCAACCGTTGAAGCTCAGCAGTTCTCCACAACTACTAAATTGAGTGTTGACGCTGTTTTCACGGCTCAATTTGGT
GACTCAGACAACCAAGCTTTCGATAACTCTTCCGATGGGTTAACGCCAGGTGTTAACCAGCTGGCAGACTCTCGGGCAAG
CGCAATTGGCTCTGTCTACATGAGCTTCAATACCAGCTTCTCTGGAGATGACCTCTTGCAAACCACGTTGTTCTTTGGCA
ACAACGGTCAAGATTTATTCTCCAATGCCCAGATTGGAAGCACTGCAACACTGCCCTTTGCCCAAAGTGCACCTTTATTC
AACCCAGGTCAGTATTACTTTGCTGGTCTACCCAATAATGCAACCCTCTACCGTTTAGCCTATACCTTTAAACCCGTCGA
AGATTTGGCGGTAACGGTTGCTCCGTTGTACTATCCAACGGACATTATTGATGGCAATAGCTACACCAGTCCGTTTACAG
GGTTCAGTACCTGGTTCCTAATTAACAACCCCTTGATCACGCCCTACATTACTAACTTCCTAGGGGGTGCGGGTGCTGGT
TTTGACTGGAACTTCAATGGTGGTCCCGTGTCCCTACGGGGTGCCTATGTGGCAGTGAATGGTTTTTCTGCAGTCAACAC
TGGCCCACCCAACGACGGAGGGTTATTTGGCGATCCCTACCAAGCTACGGCTGAGTTGGAATATGCAGGTGAGTTAGGAG
ATGATTCTAACTTTGCCATTAAGTTGCAATTTACAAACTCTGAGACCTTTGGTGTCCAACAAAATGTTGTGGGTGTGAAT
GCCGAAGCGAAGTTTGGCCAATTTGGCGTATTCGGTCGCTATGGTTATTCTTTTGCTGATGGCCAAGGTGTGGCTAACCC
CATTCCCTTTGCTGCGGGTACTGTGGGCCGATTTGATGCCCAAACTTGGCAGGCAGGTGCTGGTATTCACGATTTATTAG
TACCCGGTTCTTTGTTTGCCGTATCTGCAGGGATGCCTTTCATCAACAATGTGGCATCGCCAGGGGTAGGTATAAACGAT
GAAGACCAAATTAACTTGGAGGCCTTCTATCGTTTCCCTGTGAATGACAACATCACCATTAGCCCAATTTTCTCAGCTAT
TTTGAACCCCAACAGTAGCAGCATTGAGCCTAACCTCTATCAAGGTCTGCTACGGGTTGTGTTCTCGTTCTAG

Upstream 100 bases:

>100_bases
GGGGCGATAAAGCCAAATTCTTGTTGATGATGAAATAGTCGAATTTAAGAACAGATTCTAATAAAGAATCTTTGTTCTAG
GTGTGTGTGAGGATTTTTAA

Downstream 100 bases:

>100_bases
CTTTTTAACTCCTGGAGTGAACTTCATGGTTTGACTCCTTACTCACTTCTCTGTGCGGTAATTGGCTTTGCTGATTACCG
CTTTTTGTTGGGGACTGGCT

Product: porin; major outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MTNIRDKSLVFSSLALWACLLPTAVGAVEPTALEEVQADTTAIPSLELALNSDANDSEESQVFLAPSDLQTELDANSDKA
NSTVAELETLRLADHSVSTSPSVADLMEETKTDSVGQVTSVSQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRA
MSRREAAALVNACLDNLSNRFATKEDLDALKALQDEFAAELATLRGRVDGLEARVATVEAQQFSTTTKLSVDAVFTAQFG
DSDNQAFDNSSDGLTPGVNQLADSRASAIGSVYMSFNTSFSGDDLLQTTLFFGNNGQDLFSNAQIGSTATLPFAQSAPLF
NPGQYYFAGLPNNATLYRLAYTFKPVEDLAVTVAPLYYPTDIIDGNSYTSPFTGFSTWFLINNPLITPYITNFLGGAGAG
FDWNFNGGPVSLRGAYVAVNGFSAVNTGPPNDGGLFGDPYQATAELEYAGELGDDSNFAIKLQFTNSETFGVQQNVVGVN
AEAKFGQFGVFGRYGYSFADGQGVANPIPFAAGTVGRFDAQTWQAGAGIHDLLVPGSLFAVSAGMPFINNVASPGVGIND
EDQINLEAFYRFPVNDNITISPIFSAILNPNSSSIEPNLYQGLLRVVFSF

Sequences:

>Translated_610_residues
MTNIRDKSLVFSSLALWACLLPTAVGAVEPTALEEVQADTTAIPSLELALNSDANDSEESQVFLAPSDLQTELDANSDKA
NSTVAELETLRLADHSVSTSPSVADLMEETKTDSVGQVTSVSQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRA
MSRREAAALVNACLDNLSNRFATKEDLDALKALQDEFAAELATLRGRVDGLEARVATVEAQQFSTTTKLSVDAVFTAQFG
DSDNQAFDNSSDGLTPGVNQLADSRASAIGSVYMSFNTSFSGDDLLQTTLFFGNNGQDLFSNAQIGSTATLPFAQSAPLF
NPGQYYFAGLPNNATLYRLAYTFKPVEDLAVTVAPLYYPTDIIDGNSYTSPFTGFSTWFLINNPLITPYITNFLGGAGAG
FDWNFNGGPVSLRGAYVAVNGFSAVNTGPPNDGGLFGDPYQATAELEYAGELGDDSNFAIKLQFTNSETFGVQQNVVGVN
AEAKFGQFGVFGRYGYSFADGQGVANPIPFAAGTVGRFDAQTWQAGAGIHDLLVPGSLFAVSAGMPFINNVASPGVGIND
EDQINLEAFYRFPVNDNITISPIFSAILNPNSSSIEPNLYQGLLRVVFSF
>Mature_609_residues
TNIRDKSLVFSSLALWACLLPTAVGAVEPTALEEVQADTTAIPSLELALNSDANDSEESQVFLAPSDLQTELDANSDKAN
STVAELETLRLADHSVSTSPSVADLMEETKTDSVGQVTSVSQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAM
SRREAAALVNACLDNLSNRFATKEDLDALKALQDEFAAELATLRGRVDGLEARVATVEAQQFSTTTKLSVDAVFTAQFGD
SDNQAFDNSSDGLTPGVNQLADSRASAIGSVYMSFNTSFSGDDLLQTTLFFGNNGQDLFSNAQIGSTATLPFAQSAPLFN
PGQYYFAGLPNNATLYRLAYTFKPVEDLAVTVAPLYYPTDIIDGNSYTSPFTGFSTWFLINNPLITPYITNFLGGAGAGF
DWNFNGGPVSLRGAYVAVNGFSAVNTGPPNDGGLFGDPYQATAELEYAGELGDDSNFAIKLQFTNSETFGVQQNVVGVNA
EAKFGQFGVFGRYGYSFADGQGVANPIPFAAGTVGRFDAQTWQAGAGIHDLLVPGSLFAVSAGMPFINNVASPGVGINDE
DQINLEAFYRFPVNDNITISPIFSAILNPNSSSIEPNLYQGLLRVVFSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 65019; Mature: 64888

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNIRDKSLVFSSLALWACLLPTAVGAVEPTALEEVQADTTAIPSLELALNSDANDSEES
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHCCCCEEEEECCCCCCCCCC
QVFLAPSDLQTELDANSDKANSTVAELETLRLADHSVSTSPSVADLMEETKTDSVGQVTS
EEEECCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHH
VSQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAMSRREAAALVNACLDNLSNR
HHHHHCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FATKEDLDALKALQDEFAAELATLRGRVDGLEARVATVEAQQFSTTTKLSVDAVFTAQFG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCEEEEEEEEEEEEECC
DSDNQAFDNSSDGLTPGVNQLADSRASAIGSVYMSFNTSFSGDDLLQTTLFFGNNGQDLF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCHHEEEEEEECCCCHHHH
SNAQIGSTATLPFAQSAPLFNPGQYYFAGLPNNATLYRLAYTFKPVEDLAVTVAPLYYPT
CCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCHHHHEEEEEECCCCC
DIIDGNSYTSPFTGFSTWFLINNPLITPYITNFLGGAGAGFDWNFNGGPVSLRGAYVAVN
EEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEE
GFSAVNTGPPNDGGLFGDPYQATAELEYAGELGDDSNFAIKLQFTNSETFGVQQNVVGVN
CCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEC
AEAKFGQFGVFGRYGYSFADGQGVANPIPFAAGTVGRFDAQTWQAGAGIHDLLVPGSLFA
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCEE
VSAGMPFINNVASPGVGINDEDQINLEAFYRFPVNDNITISPIFSAILNPNSSSIEPNLY
EECCCCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEHHHHHHHHHCCCCCCCCCHHH
QGLLRVVFSF
HHHHHHHHCC
>Mature Secondary Structure 
TNIRDKSLVFSSLALWACLLPTAVGAVEPTALEEVQADTTAIPSLELALNSDANDSEES
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHCCCCEEEEECCCCCCCCCC
QVFLAPSDLQTELDANSDKANSTVAELETLRLADHSVSTSPSVADLMEETKTDSVGQVTS
EEEECCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHH
VSQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAMSRREAAALVNACLDNLSNR
HHHHHCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FATKEDLDALKALQDEFAAELATLRGRVDGLEARVATVEAQQFSTTTKLSVDAVFTAQFG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCEEEEEEEEEEEEECC
DSDNQAFDNSSDGLTPGVNQLADSRASAIGSVYMSFNTSFSGDDLLQTTLFFGNNGQDLF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCHHEEEEEEECCCCHHHH
SNAQIGSTATLPFAQSAPLFNPGQYYFAGLPNNATLYRLAYTFKPVEDLAVTVAPLYYPT
CCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCHHHHEEEEEECCCCC
DIIDGNSYTSPFTGFSTWFLINNPLITPYITNFLGGAGAGFDWNFNGGPVSLRGAYVAVN
EEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEE
GFSAVNTGPPNDGGLFGDPYQATAELEYAGELGDDSNFAIKLQFTNSETFGVQQNVVGVN
CCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEC
AEAKFGQFGVFGRYGYSFADGQGVANPIPFAAGTVGRFDAQTWQAGAGIHDLLVPGSLFA
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCEE
VSAGMPFINNVASPGVGINDEDQINLEAFYRFPVNDNITISPIFSAILNPNSSSIEPNLY
EECCCCHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEHHHHHHHHHCCCCCCCCCHHH
QGLLRVVFSF
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]